CsaV3_5G020100 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G020100
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5 : 14816623 .. 14817242 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCCCAAAGAGCCAAAACCCACTCCCCCCCTCTCTTTCCATGGCCTTCACTTTTACCAATCCCCTTGTTTGTTTGGTTCACATGGGTATGGGAGGAGCTTATAGGAGAGAGAGAGAGAGAGAAAAAAAAGAGACAAGTACTGTAGTGGGAGAAAGCAATTCTACTGAGCATCCCCACTACAAGCTCCTCTCCCAATAAAAACCACACCCCCATCTCTCTTCTTCCTCTTCTTCCTCTTCTTCTTCTTCCTCCTCTAATTTGTCATTGTTTCCCCTCACAGGTATTTCTTCTTTCTTTTGGATCTTGATTTCATGGTGTTTTTCTCTGTTTTTTTGTTCACCCATTTTGGGGCTACCTAAACAAACCCCATTCTTCTCTTTTTCTTTGGGGGGTTTTGAAGCTTTTAGTTTAACATCTTGATTCTCTCTCTTTTTATGCCTTTGTTTTTTTGGTATCAAAAGCTACACAAGAAGAATACTTTACTTTCCCCCTTTTTCTTCTTCTTTTTTTCTGTTTTGTTGTTGTTGGTGGTGGTGGTGGGTTTGAAACTTAAATGCTTTAACTCAAACACACACTTTGTTGTTTTTTGAAGTTTGTTTTAGGTGATGATGGATGA

mRNA sequence

ATGCATCCCAAAGAGCCAAAACCCACTCCCCCCCTCTCTTTCCATGGCCTTCACTTTTACCAATCCCCTTGTTTGTTTGGTTCACATGGCATCCCCACTACAAGCTCCTCTCCCAATAAAAACCACACCCCCATCTCTCTTCTTCCTCTTCTTCCTCTTCTTCTTCTTCCTCCTCTAATTTGTCATTGTTTCCCCTCACAGTTTGTTTTAGGTGATGATGGATGA

Coding sequence (CDS)

ATGCATCCCAAAGAGCCAAAACCCACTCCCCCCCTCTCTTTCCATGGCCTTCACTTTTACCAATCCCCTTGTTTGTTTGGTTCACATGGCATCCCCACTACAAGCTCCTCTCCCAATAAAAACCACACCCCCATCTCTCTTCTTCCTCTTCTTCCTCTTCTTCTTCTTCCTCCTCTAATTTGTCATTGTTTCCCCTCACAGTTTGTTTTAGGTGATGATGGATGA

Protein sequence

MHPKEPKPTPPLSFHGLHFYQSPCLFGSHGIPTTSSSPNKNHTPISLLPLLPLLLLPPLICHCFPSQFVLGDDG
BLAST of CsaV3_5G020100 vs. NCBI nr
Match: KGN50877.1 (hypothetical protein Csa_5G310305 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-37
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query: 1  MHPKEPKPTPPLSFHGLHFYQSPCLFGSHGIPTTSSSPNKNHTPISLLPLLPLLLLPPLI 60
          MHPKEPKPTPPLSFHGLHFYQSPCLFGSHGIPTTSSSPNKNHTPISLLPLLPLLLLPPLI
Sbjct: 1  MHPKEPKPTPPLSFHGLHFYQSPCLFGSHGIPTTSSSPNKNHTPISLLPLLPLLLLPPLI 60

Query: 61 CHCFPSQFVLGDDG 75
          CHCFPSQFVLGDDG
Sbjct: 61 CHCFPSQFVLGDDG 74

BLAST of CsaV3_5G020100 vs. TrEMBL
Match: tr|A0A0A0KR47|A0A0A0KR47_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G310305 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 7.2e-38
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query: 1  MHPKEPKPTPPLSFHGLHFYQSPCLFGSHGIPTTSSSPNKNHTPISLLPLLPLLLLPPLI 60
          MHPKEPKPTPPLSFHGLHFYQSPCLFGSHGIPTTSSSPNKNHTPISLLPLLPLLLLPPLI
Sbjct: 1  MHPKEPKPTPPLSFHGLHFYQSPCLFGSHGIPTTSSSPNKNHTPISLLPLLPLLLLPPLI 60

Query: 61 CHCFPSQFVLGDDG 75
          CHCFPSQFVLGDDG
Sbjct: 61 CHCFPSQFVLGDDG 74

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN50877.11.1e-37100.00hypothetical protein Csa_5G310305 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KR47|A0A0A0KR47_CUCSA7.2e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G310305 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G020100.1CsaV3_5G020100.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None