CsaV3_5G015110 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G015110
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5 : 12304259 .. 12304408 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCACACTTGAAGAGAAGATTGTTCGATGGCAACCTAAAGACCATGAGTTGAGAAGGTTGGCCAAGAAAGTAAGGTGTGAAAGTGGATCAGACTACACGTTTAGAAATCACGACATGTTGGTAAAAGACAAAAGACTATGCGTCCCATAA

mRNA sequence

CCCACACTTGAAGAGAAGATTGTTCGATGGCAACCTAAAGACCATGAGTTGAGAAGGTTGGCCAAGAAAGTAAGGTGTGAAAGTGGATCAGACTACACGTTTAGAAATCACGACATGTTGGTAAAAGACAAAAGACTATGCGTCCCATAA

Coding sequence (CDS)

CCCACACTTGAAGAGAAGATTGTTCGATGGCAACCTAAAGACCATGAGTTGAGAAGGTTGGCCAAGAAAGTAAGGTGTGAAAGTGGATCAGACTACACGTTTAGAAATCACGACATGTTGGTAAAAGACAAAAGACTATGCGTCCCATAA

Protein sequence

PTLEEKIVRWQPKDHELRRLAKKVRCESGSDYTFRNHDMLVKDKRLCVP
BLAST of CsaV3_5G015110 vs. NCBI nr
Match: XP_008455805.1 (PREDICTED: uncharacterized protein LOC103495900 [Cucumis melo])

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-06
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 0

Query: 1   PTLEEKIVRWQPKDHELRRLAKKVRCESGSDYTFRNHDMLVKDKRLCVP 50
           PTLE++IV+ Q +D  LR+LAK+VRCE  SDY FR+    +K+ RLCVP
Sbjct: 75  PTLEKEIVKSQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVP 123

BLAST of CsaV3_5G015110 vs. TrEMBL
Match: tr|A0A1S3C1V8|A0A1S3C1V8_CUCME (uncharacterized protein LOC103495900 OS=Cucumis melo OX=3656 GN=LOC103495900 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-06
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 0

Query: 1   PTLEEKIVRWQPKDHELRRLAKKVRCESGSDYTFRNHDMLVKDKRLCVP 50
           PTLE++IV+ Q +D  LR+LAK+VRCE  SDY FR+    +K+ RLCVP
Sbjct: 75  PTLEKEIVKSQLEDPPLRKLAKEVRCERRSDYIFRSDGASLKEMRLCVP 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008455805.12.5e-0657.14PREDICTED: uncharacterized protein LOC103495900 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3C1V8|A0A1S3C1V8_CUCME1.7e-0657.14uncharacterized protein LOC103495900 OS=Cucumis melo OX=3656 GN=LOC103495900 PE=... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G015110.1CsaV3_5G015110.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None