CsaV3_5G015090 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAAGGTTCATTAAATTTGGGTTGAGTCATGCCAAAGGTCTTAATTCAATTAGATGTCCATGTTTGAATTGCGGCAATCGTTTACTTAAGGATGTCTCAACAGTTCGGTATCATCTGTATGCCAATGGAATTGATAAGAGTTACAAG ATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAAGGTTCATTAAATTTGGGTTGAGTCATGCCAAAGGTCTTAATTCAATTAGATGTCCATGTTTGAATTGCGGCAATCGTTTACTTAAGGATGTCTCAACAGTTCGGTATCATCTGTATGCCAATGGAATTGATAAGAGTTACAAG ATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAAGGTTCATTAAATTTGGGTTGAGTCATGCCAAAGGTCTTAATTCAATTAGATGTCCATGTTTGAATTGCGGCAATCGTTTACTTAAGGATGTCTCAACAGTTCGGTATCATCTGTATGCCAATGGAATTGATAAGAGTTACAAG MDKSWMTQNRMSREYDLGVERFIKFGLSHAKGLNSIRCPCLNCGNRLLKDVSTVRYHLYANGIDKSYK
BLAST of CsaV3_5G015090 vs. NCBI nr
Match: XP_022159378.1 (uncharacterized protein LOC111025795 [Momordica charantia]) HSP 1 Score: 105.1 bits (261), Expect = 9.3e-20 Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of CsaV3_5G015090 vs. NCBI nr
Match: XP_022148697.1 (uncharacterized protein LOC111017298 [Momordica charantia] >XP_022148698.1 uncharacterized protein LOC111017298 [Momordica charantia] >XP_022148699.1 uncharacterized protein LOC111017298 [Momordica charantia]) HSP 1 Score: 100.5 bits (249), Expect = 2.3e-18 Identity = 44/68 (64.71%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of CsaV3_5G015090 vs. NCBI nr
Match: XP_015387888.1 (uncharacterized protein LOC107177880 [Citrus sinensis]) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-14 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of CsaV3_5G015090 vs. NCBI nr
Match: XP_015387932.1 (uncharacterized protein LOC107177904 [Citrus sinensis]) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-14 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of CsaV3_5G015090 vs. NCBI nr
Match: XP_024046414.1 (uncharacterized protein LOC112100810 [Citrus clementina]) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-14 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of CsaV3_5G015090 vs. TrEMBL
Match: tr|M5WIW7|M5WIW7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015067mg PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.7e-14 Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of CsaV3_5G015090 vs. TrEMBL
Match: tr|A5C8Z9|A5C8Z9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_020028 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 3.9e-14 Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of CsaV3_5G015090 vs. TrEMBL
Match: tr|A5B592|A5B592_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_019902 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.0e-14 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of CsaV3_5G015090 vs. TrEMBL
Match: tr|A5AM06|A5AM06_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_042965 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.0e-14 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of CsaV3_5G015090 vs. TrEMBL
Match: tr|A0A251SGZ8|A0A251SGZ8_HELAN (Putative transposon, En/Spm-like, Transposase-associated domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0441971 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 9.5e-13 Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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