CsaV3_5G014900 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G014900
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5 : 12025902 .. 12026432 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAGAGTGCGTGAGATTTTACAGATCCTTTGTTGTAAAACCAACATTGGAGACGTGCGACTTGATCATGAAGGAATGGCTCGTGTAACAGCTCAGGTCTAAAATGCGGCTCAGGTGTGTGACTTGGTTGAGATGGTAGCGGCTCGGATCGAAAAAGACGGCTGGGACGACGGTACGAGGCTTGCCAGAACGAACTCAGGGCAGTAAAGGTGTCGACGTGACTGAAGCCGGTAGATGTGAAGGCTGACTTGGACAGAGACGACAGAGGTACAGGTACAACCCAGTGTGGTGCGACAAGGATGTGCGCGCGGGCGACTCAACTTCTAATGAATGGATCAAACCAGCTTCGACTGCTTCACGACGACGGTGGTGGAGATCGGATGTTGCGAGGACGGCCGACGGCGGGAAACCACGGCGACGGGGCTTCACATGAGGATATCAGATGGAGGCAACAAGCGACGAGGAAGATTGAAGAAGATGAAGTGCACACTAGCCAAGGAGTCTTGATTAAAAATAAATATATATTATTA

mRNA sequence

ATGTGCGCGCGGGCGACTCAACTTCTAATGAATGGATCAAACCAGCTTCGACTGCTTCACGACGACGGTGGTGGAGATCGGATGTTGCGAGGACGGCCGACGGCGGGAAACCACGGCGACGGGGCTTCACATGAGGATATCAGATGGAGGCAACAAGCGACGAGGAAGATTGAAGAAGATGAAGTGCACACTAGCCAAGGAGTCTTGATTAAAAATAAATATATATTATTA

Coding sequence (CDS)

ATGTGCGCGCGGGCGACTCAACTTCTAATGAATGGATCAAACCAGCTTCGACTGCTTCACGACGACGGTGGTGGAGATCGGATGTTGCGAGGACGGCCGACGGCGGGAAACCACGGCGACGGGGCTTCACATGAGGATATCAGATGGAGGCAACAAGCGACGAGGAAGATTGAAGAAGATGAAGTGCACACTAGCCAAGGAGTCTTGATTAAAAATAAATATATATTATTA

Protein sequence

MCARATQLLMNGSNQLRLLHDDGGGDRMLRGRPTAGNHGDGASHEDIRWRQQATRKIEEDEVHTSQGVLIKNKYILL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G014900.1CsaV3_5G014900.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..46

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G014900CSPI05G01050Wild cucumber (PI 183967)cpicucB286
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G014900Cucumber (Gy14) v2cgybcucB232
CsaV3_5G014900Cucurbita maxima (Rimu)cmacucB0879
CsaV3_5G014900Cucurbita moschata (Rifu)cmocucB0867
CsaV3_5G014900Melon (DHL92) v3.5.1cucmeB400
CsaV3_5G014900Melon (DHL92) v3.6.1cucmedB393