CsaV3_5G014870 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G014870
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5 : 11967340 .. 11969576 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACTGCCCTCTCACTCTCCAAATCGCCGGTCATCTCCTACCTTCGTTGTCGATGGCGGTCTTTTAGGTATTTATGGATCTAATCTTTACTCTTTGTACTTTTCTTTGAGTAAGTCATCCCAAAAAAGATGGTTTTATGGTATTTGAGTAAAGCTTTACGCTATTTGCTAAATTGCAAAGTGGTTTCTCGACACAAAATCCCATGGTCGAAATTTAATAAGAATAAAGTTCTTGCTCCTGCCGATTTTTTCAATTAAACTTGAAACTCAATTCTCAACATTGCATCTAAGATATGTCCTTCACAAATTTTTGTATTTATTCCTTAATTTTTCTAGTTTTCTGGCCAAAATGCCCATAATTTTTCTGATGAAGTTTTCATATTCAAAACATGTCATTCTCATCATTTTTTTTGTTGAGTAAAATGTTTGCTTCTAGAAAGGTATGAACTCTTTTTCTATGTTCAAAATAAACTTACTTTTTATATATATCTTCTTTATTCTCATGACATTATCTGTTAATCAGTCAAAATAAAGTTGCTATTTATATTTAAGGGTATGAACTCTTTGAACAATATAATATGTCATCAAATTAAATTATGAAAGTTAATGCATTGAATGGGTCTATGTTTGCTATTTTTTGAGGGTATTACTTTTTTTTCAATGCATATGCGTTGTTTGCTTTATTGTCAACCATGCAAACATGCTTTAATTTCACATGTTGTTAAATGATCGAAGTTTTAATTAATTGGTATCCTATGAATTTCTTTGATTCATTGCACTGTTGAGTAAAACTTGATTATTGAATGTACATGGAAGGAAATCATTTTAGAATGTTATTATAATGGAATTCTGGTGAACTAGATTTTACTTTGCTGGTTCTAATTTTATTAGTTAACTTTCTTTTGAGGTAGGGGATGACCATTTGAATAAAATTTTGATTAGTCAAAACATAATCTTGATTGTTTATGATTAGTTAACATGTTTTTGCTTGGAGAAGGGGGAATTGAATATGGTTTTAGAAAATATTGGCTTTTTGTTGATACTTAAATCATATTCTTAGTGATGGTGCCAGTTCCTTCCCATTTTCCTACTTCGCCTCTCTTGTGTGTGTGTTTACTTTGATCAATTAATATGGTACATATCTGGTGGTATTTTATTTATGTTAGTGATTTTGGGATCTCACGCTTGAAGTCACAAGCATTTCTTTCGTCAAAATCACCTGTTGGGACTGTAAGTTATTGTGTTTGTGGCATTATTCCACACAATAACTGTAAGATGTTTCGTGAGTCTGGACATTTTATTAACCTACAAAAAAGACTGCTTCCTATTTATAAGATGTTTATTTGTGCTTCACTACTTGTGTTCTTTATGGTAGAGAATTGTATTGACTTTCATGGGTAAAGGAAGGAAAACTTGCGATCTTGAACAATTAGATAAATCTAGTCTTCTTTCCAGAATGCAAGTTTCTACTTCCATCTACAAAGGTGTTACTGTTAGAGAGAAGTTTCTAAAATTCCTACGTCCTTTCTAGTATATATTTTGATTAATCAAGCCTACAGTTTCTCTGTATAGAATTGTCTTAGCTTTTAAATGGTTGAGAACTTCTTAAGCAATGGATATTATATATTTCTTTAGAGATGGCTTTCAAATCATTTTTATGGTTATTGAAACTGTAGGGAGGGAGGTTCTTTCAATTTCTAGTGTTTATATTAGAACTCGTAGTTATTGTTTATGGTAAACCATTAGATCTGGCTTGTTCCTTGAAAAAGCTTTTGGCTATTGAAATTTGGCAAGACTGTCTTGTATACATAAAAGATAGTTTGTATTGTAATTGTTCTTGAAATAATGAACGGATACCACTATTCTAATTATATTTCATACCACTACTATTTTTTTTTTTTTTTTGTTCTTTCCCAGCTCCATAACATAACATCACTCAAGTCTTGTGTGTAGTGAATGCAACTAATTAAAATTAGGTGCTTGTCTTGCAATCTTTTTACATATGCACTATTTTCTAACAACACAAATTGGGCAGATTTTCATTCGATCCTACTGAAACATTGGGGTTAAATGTTGCGTTGTGCTTCTATACAATGTATACTTTGATTTCCTAATTAAGGTATATTTTTCTTCACTATCTTTTAGAGTTTTCAAATCGAGAGAAAAAATAATTAATTCGATCATGACATTGGAGAAGGCTAAAGAGATTGTGGCTTCTAATCTCGTCATGGTCTTCAG

mRNA sequence

CCACTGCCCTCTCACTCTCCAAATCGCCGGTCATCTCCTACCTTCGTTGTCGATGGCGGTCTTTTAGAGTTTTCAAATCGAGAGAAAAAATAA

Coding sequence (CDS)

CCACTGCCCTCTCACTCTCCAAATCGCCGGTCATCTCCTACCTTCGTTGTCGATGGCGGTCTTTTAGAGTTTTCAAATCGAGAGAAAAAATAA

Protein sequence

PLPSHSPNRRSSPTFVVDGGLLEFSNREKK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G014870.1CsaV3_5G014870.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G014870Cucumber (Gy14) v2cgybcucB232
CsaV3_5G014870Cucumber (Gy14) v1cgycucB246
CsaV3_5G014870Cucurbita maxima (Rimu)cmacucB0879
CsaV3_5G014870Cucurbita moschata (Rifu)cmocucB0867
CsaV3_5G014870Wild cucumber (PI 183967)cpicucB286
CsaV3_5G014870Melon (DHL92) v3.5.1cucmeB400
CsaV3_5G014870Melon (DHL92) v3.6.1cucmedB393