CsaV3_5G014640 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATACTAAGCTTTAAATCTGTCGAACGCTTTAAATCTGTCGAACAAAGTAGGTGAGCCAGGAAGGCTTTAATTTTTGAAAACTTTAAGAGATGACTTCTTTTACAAAGCTATATATGCTTGGATTAACAATTTTTTTCTTTTTTTTTGCTTAGTTTATATAAAATTTCAAAATTATTTTTATAATATCCAAAATCTTAATGGCATTATTGGTAATTTCATCAAAATTCAAACCCAAATTCTTAAGGGTAAAAAACTCTTTATTAATAACCCCCAACCCACCTCCATTCCAAATCAAACCCAACCCAACAAAAAGCATTCACAATAGTATATTTCATATACAACAAAAGGCAAAAAAAAACAAAAAAGGAAAAGAGAAAAAAGGAAAAAACACAAAGAGGAAAAATGTCTCTCATCACAGAAGAGCTGAAAGCCAAAGCTGATGAAGTGTATTATGGTGACAAGATCTCACAAGAGAAAACAAGGCTTCTTCTAAAAGAAGTGGGACTTCCAAATGGGCTTTTGCCATTGAAAGACGTAATAGAATGTGGCTATGTGAAGGAGACTGGCTTCGTTTGGATGAAACAAAAGAAAGCCATAACCCACAAATTCAACAAGATTGGTAAGCAAGTGAGTTATGCAAAAGAAGTCACTGCCAATGTAGAGAAGAATAAAGTCAAGAATTTGACTGGTGTTAAGGCTAAGGAGGTTTTGATTTGGCTCACTTTGTCCGAGATCTATGTGGACGACCCACCAACCGGGAATATTACCTTTAAGATCCCTACTGGGCTCTCCAGGGCTTACCCGGTCAATGCATTTGAGGTCGAGGAGGAGGAGACGGCCACGGCAACGGAGAAGAAGGAAGTGAAAGAGGAGGAGGGAGTGAAGGAGAAGGAGGTGAGAGAGGTGAGTAATGGAGGGAGTGTGGTGGTGAATGTGAAAGAGGTTTGA ATGATACTAAGCTTTAAATCTGTCGAACGCTTTAAATCTGTCGAACAAAAAGAGCTGAAAGCCAAAGCTGATGAAGTGTATTATGGTGACAAGATCTCACAAGAGAAAACAAGGCTTCTTCTAAAAGAAGTGGGACTTCCAAATGGGCTTTTGCCATTGAAAGACGTAATAGAATGTGGCTATGTGAAGGAGACTGGCTTCGTTTGGATGAAACAAAAGAAAGCCATAACCCACAAATTCAACAAGATTGGTAAGCAAGTGAGTTATGCAAAAGAAGTCACTGCCAATGTAGAGAAGAATAAAGTCAAGAATTTGACTGGTGTTAAGGCTAAGGAGGTTTTGATTTGGCTCACTTTGTCCGAGATCTATGTGGACGACCCACCAACCGGGAATATTACCTTTAAGATCCCTACTGGGCTCTCCAGGGCTTACCCGGTCAATGCATTTGAGGTCGAGGAGGAGGAGACGGCCACGGCAACGGAGAAGAAGGAAGTGAAAGAGGAGGAGGGAGTGAAGGAGAAGGAGGTGAGAGAGGTGAGTAATGGAGGGAGTGTGGTGGTGAATGTGAAAGAGGTTTGA ATGATACTAAGCTTTAAATCTGTCGAACGCTTTAAATCTGTCGAACAAAAAGAGCTGAAAGCCAAAGCTGATGAAGTGTATTATGGTGACAAGATCTCACAAGAGAAAACAAGGCTTCTTCTAAAAGAAGTGGGACTTCCAAATGGGCTTTTGCCATTGAAAGACGTAATAGAATGTGGCTATGTGAAGGAGACTGGCTTCGTTTGGATGAAACAAAAGAAAGCCATAACCCACAAATTCAACAAGATTGGTAAGCAAGTGAGTTATGCAAAAGAAGTCACTGCCAATGTAGAGAAGAATAAAGTCAAGAATTTGACTGGTGTTAAGGCTAAGGAGGTTTTGATTTGGCTCACTTTGTCCGAGATCTATGTGGACGACCCACCAACCGGGAATATTACCTTTAAGATCCCTACTGGGCTCTCCAGGGCTTACCCGGTCAATGCATTTGAGGTCGAGGAGGAGGAGACGGCCACGGCAACGGAGAAGAAGGAAGTGAAAGAGGAGGAGGGAGTGAAGGAGAAGGAGGTGAGAGAGGTGAGTAATGGAGGGAGTGTGGTGGTGAATGTGAAAGAGGTTTGA MILSFKSVERFKSVEQKELKAKADEVYYGDKISQEKTRLLLKEVGLPNGLLPLKDVIECGYVKETGFVWMKQKKAITHKFNKIGKQVSYAKEVTANVEKNKVKNLTGVKAKEVLIWLTLSEIYVDDPPTGNITFKIPTGLSRAYPVNAFEVEEEETATATEKKEVKEEEGVKEKEVREVSNGGSVVVNVKEV
BLAST of CsaV3_5G014640 vs. NCBI nr
Match: XP_004142271.1 (PREDICTED: uncharacterized protein LOC101204611 [Cucumis sativus] >KGN49622.1 hypothetical protein Csa_5G029450 [Cucumis sativus]) HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81 Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. NCBI nr
Match: XP_022942634.1 (uncharacterized protein LOC111447611 [Cucurbita moschata]) HSP 1 Score: 280.0 bits (715), Expect = 6.0e-72 Identity = 158/180 (87.78%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. NCBI nr
Match: XP_022993606.1 (uncharacterized protein LOC111489547 [Cucurbita maxima]) HSP 1 Score: 280.0 bits (715), Expect = 6.0e-72 Identity = 143/180 (79.44%), Postives = 157/180 (87.22%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. NCBI nr
Match: XP_008464697.1 (PREDICTED: uncharacterized protein LOC103502519 [Cucumis melo]) HSP 1 Score: 277.7 bits (709), Expect = 3.0e-71 Identity = 161/180 (89.44%), Postives = 166/180 (92.22%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. NCBI nr
Match: XP_023521762.1 (uncharacterized protein LOC111785620 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 273.5 bits (698), Expect = 5.6e-70 Identity = 155/180 (86.11%), Postives = 167/180 (92.78%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TAIR10
Match: AT1G09310.1 (Protein of unknown function, DUF538) HSP 1 Score: 172.6 bits (436), Expect = 2.4e-43 Identity = 87/138 (63.04%), Postives = 110/138 (79.71%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TAIR10
Match: AT1G56580.1 (Protein of unknown function, DUF538) HSP 1 Score: 167.9 bits (424), Expect = 6.0e-42 Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TAIR10
Match: AT5G46230.1 (Protein of unknown function, DUF538) HSP 1 Score: 130.6 bits (327), Expect = 1.1e-30 Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TAIR10
Match: AT4G24130.1 (Protein of unknown function, DUF538) HSP 1 Score: 119.4 bits (298), Expect = 2.4e-27 Identity = 55/131 (41.98%), Postives = 88/131 (67.18%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TAIR10
Match: AT5G49600.1 (Protein of unknown function, DUF538) HSP 1 Score: 115.2 bits (287), Expect = 4.6e-26 Identity = 68/141 (48.23%), Postives = 90/141 (63.83%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TrEMBL
Match: tr|A0A0A0KMJ9|A0A0A0KMJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G029450 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 7.2e-82 Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TrEMBL
Match: tr|A0A1S3CM20|A0A1S3CM20_CUCME (uncharacterized protein LOC103502519 OS=Cucumis melo OX=3656 GN=LOC103502519 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 2.0e-71 Identity = 161/180 (89.44%), Postives = 166/180 (92.22%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TrEMBL
Match: tr|A0A2P5E7Y1|A0A2P5E7Y1_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_225560 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.1e-53 Identity = 114/182 (62.64%), Postives = 137/182 (75.27%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TrEMBL
Match: tr|A0A1R3IUR0|A0A1R3IUR0_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09690 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.2e-52 Identity = 103/143 (72.03%), Postives = 124/143 (86.71%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TrEMBL
Match: tr|A0A1U8M455|A0A1U8M455_GOSHI (uncharacterized protein LOC107933815 OS=Gossypium hirsutum OX=3635 GN=LOC107933815 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 2.0e-52 Identity = 100/142 (70.42%), Postives = 124/142 (87.32%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |