CsaV3_5G013950 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTATGATGAAAAAGAGTTATAACCAAAGGTTACCCCAACAACGACCATTTGTCAATTTCTGAACCAAACCCTATAAACTATTGATTCATGAAGAAACGTTGTTTACATTTTTGTCGCTTTGTTTATGGATTTAGAATAAAATATTGGTGAGAGCAAATAATTATCCCTTTTCTAAGTTTTGGGAGGACGACAGATATATATATATGGTTATTGTATATGTACAGAGAGAGAGAGAGAGCGAATCCATGGCGGTGGCGGAACCAAGTAGTTGTTGTCGAAAGGTGTTGATAACAGGTGTTAGCAAAGGGTTAGGAAGAGCCTTAGCCTTGGAGTTAGCAAATCGTGGCCATACAATTATTGGTTGCTCAAGAGATCAAGTTAAACTTGATTCTCTTCAGCAACAACTTTCCACCACTTCTCTAAATCAACATTTCTTCTTCAAACTTGATGTGGTATATGTATCTCAACCTATCTTCTTCTTCTTTTCAAATATTAACAAAAGGGTCTCATTCAAATTTCTTACCACCTTTCTTTTCCCAGAAATCAGACAATAATGTTCAAGAATTCGCACAATTTGTTGCCAAAAACAACCTTGTTCCTCATATTCTTGGTAATTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTGCCTTTAACTACTGCTTGCTTGTCGTTTCTAATCGCCCCTCTGTCATGTTTCTACTTTCTTTCTTTCTTATTTTGTAAGATCTGAGAATTTGAATATACTCGATAGTTTTATTTTTGTTTCTCATTCCTTAAGAGCTAAAGCAGAAACTCGTTTCATAACTATGTTTTGGTTTCTTCTGTTTCTTGCATTTTTTCCTTACCTTTTTTCATATCTTCATAGTTTAATTTATATAGCGAAGAAGTCTATCAGTTTGTGTATTGGTGTTAATGTGTATCATTAATATTAAGAAAATATGAAAAACATTCTATGTTTTGAGAAGTAAATTAAGAAACAATAGTTTAAAAAAGAAAAGAAAAGAAATGATTATTTTCATGTCAGCAGTGGGAACTCGGCCGGCCATACCAATACAGCCAAAGTATTTCAAAACGACACTAAATAAACTACAAACAAAGCATTGGGAAATACTTTTGTAGTCATCAGCAAATCGTTTTTCTTTCTTTCTTTTTTAATTAAGAAACAATACATGTAAAAATAAAATAACAAATAAAAATGGAATACTTCACTAAATTCTCATTTCGTAACCATTCTTTTTAATACTGTTCTATTTTTTAAATTTGCAATTACTTTCTCTCCATTCCTAACCATGATTTTTATTTTCACACTAAACAAAACATTTCAATATTCTTAGTTAAAATCTCGAAAGAAAAACAATTTCTTTTAGATCATATTGTTTAGTATAACGAGCCACTTGTTTTGAAAATTTGTGTTTATTTCCTCTCCATTTCTATGATGGGTGTGGTTTCATTTTTTCTACGGAAAAAAGAATTGAATTCATAGTGAAATTTTGATAATAAAAACCAAGTTTTAAACACTCACTTTTACTTTTGTTTTTCTAAACTTGGATTTAAAAAAATATTGGTAATAAGTATATAATCAAACAAAAAAATTTAGTAAATAAAAAATAAAAAATCTAATGGTTATTAAAGAGGACTTTTGCATTCAAACCATGACTCAATTTTTGAAACATTAAACAAAAACAGTAGATATGGATATAGAAACTTTTGTAAAAGCTAAGATACTAAAAACGAAATGGTTATCCAACCCGCGCTAAATTAGTAGTTTTAATTTTGACATGGTAAATTACAAAGTTGAGTACTATACAACTAATTGAAAACGGAAGTTTTAATATTTGGTGGTATTATTTCACAGTGAATAATGCAGGTTTGGCACATAAAAGTGCAAAGATATGGGAACTTGACGCAGAAGAATTTGATAATGTGATTGATACAAATGTAAAAGGAATTGCTAATATTTTGAGACATTTCATTCCACTTATGATTCAAAACAACAATGGAATTATTGTCAATATGTCTTCTGGTGCTGGAAGATCTGCTCATGAAGATGTAAGGCTGGCTGTGACAATGTTATATTCATATTAAATAATATATGATCCATATGTTTATTATTAATTATTATGACAAAGTTGTTTAATGAGTGTTTGGTATTATTAATATTGCAGTTTGCACCATATTGTTCTTCCAAATGGGCAGTTGAGGGACTAAGTAAATGTATTGCTAAAGGGCTACCAGATGGTATGGCAATTGTTGCATTAAATCCTGGCTCTATACACACTGACATGCTTCATTTATGCCTTGGTGATTCAGCTGCCCAATTTCAATCTCCTCACAAATGGTATATCAACTCGTTTAACCTTTTTAATATCTTATTTTATTTTTTCAATTTCATATAGCCCACATATTTCAAATTAAGCTTATTTAACCAAATATTTACCTAATATAGCAAAATTTTAGATGTACTGCTAATAAGACACTAATCGACTACAATCAATGTCTAAATAGTGATATATTCTATATACAATCAATGTCTAAATAGTATTGGTTGATAGTCATCTCCCTTTGAGCAATGGACAAGAGTTCGTTCTCTAGAAACCTCAATCTCACATTATTTTTATTTGAGAAATGTGAGACGAACGAGTCATGTGCATTCTTTGGCGTCTCTACAATACTATGTGCTCCAACATTTCTTCAACAGCTGTAATTTTAATTTCAAACATGGCTTTACTTGCCTTAATATTTTAATTCTTCAAAACAGCAACATCCTCAAGTGCATTAACTTTAATGCCTTCTACAACATATCTCACAAGTCTTCTAGGTGCATTAACTTTGAGATATGACTTCATGCATGTGGACCATGTTTTGTAATTCTAGGTGTTGAGCTTCTTGATTTTTCTCCAACAACTTTTGAAGGTCTCCCATTATGATGAACGAATGCACTCCTCCAAAACTTTGTCCTAGACAACAAGTTTCACACTTCTAAGTAACTTTGTCCCAAACAACAAGCTTCAAACTTCTAAACTATACTCAATCTTCAAAAGCACCAACATCGCAAACTAAGCTAACTTGGCTCTTGCCACTTCTTGAAGATATTGGCACAAAAGGAAAGAGAGACGATCACTTAAAAGAAAGAAAACTTTGATTGAGAGAACAAAGATGGACACTTTAGAGATAATACATTTTTACTCTTAAGACACTCACTCACTTTTCACTCAAAATTTCTTTCTAACTCGCTTGTTTTCTTTCTTCCTCTCTTTGTTTTTCTTGCTTGCTTACCCATGAGACAAATAAACTAAAACCAATCATGAGATTCTATATTTGCATTATTTATACTTTTAAAATTGTGAAACTTGTGCTTCTTTATTCCTCATTAACATAAAACTAATGTTGCTACTTTATATTATCTTAATTTGAGTAGATTGACCTTTAAATTATTCTACTATTGTTGTAACAGGGCTATAAAAGCAGCAACTATGATTCTTGATCTTACTCCAAAAGATAATGGAGAGTCTCTAACAGTCAATAATCCACGTGAACTTTCAACGGCATAATTGATTTGTATTTTCATTCACTTGCCCACTAAATAGATAATGATACTTAATTTCGGATGCATGGTAGATCGTGTTTACCTTGTTAAACCCAATAAGGATCATGAATGCTTAATGTGCCTATTAGAAATGTGTACGATGATATAAATAAATATGGAGTAAACTAAAGTATATCTCAAACTACCTCACTTCACAAATCGATCGTTATGTGATAATAAAAAAAATAAAGAAAAAGAGAATGACACTAAAAATTGATGGATGTATAACTATGAATCTTGACCTTCAATGGTATCGGCATGCCATAATGGAGGATTGATTACCTGGAACACACAATCCAACTCAGTCTGCAACTACATTCTTAGCTCCCTTCCTATCCTTTATTGTTAGGTTTAACTCTTGAACAAGAATGATTTGTTTCACAAGTATTGGTTTGGATTCTTTTTTCGTCATCAAGTACCTAACGTTGCGTGATCAGTGTAGGTAGGTGTTTTAGAGATGAAAACATGA ATGGTTATTGTATATGTACAGAGAGAGAGAGAGAGCGAATCCATGGCGGTGGCGGAACCAAGTAGTTGTTGTCGAAAGGTGTTGATAACAGGTGTTAGCAAAGGGTTAGGAAGAGCCTTAGCCTTGGAGTTAGCAAATCGTGGCCATACAATTATTGGTTGCTCAAGAGATCAAGTTAAACTTGATTCTCTTCAGCAACAACTTTCCACCACTTCTCTAAATCAACATTTCTTCTTCAAACTTGATGTGAAATCAGACAATAATGTTCAAGAATTCGCACAATTTGTTGCCAAAAACAACCTTGTTCCTCATATTCTTGTGAATAATGCAGGTTTGGCACATAAAAGTGCAAAGATATGGGAACTTGACGCAGAAGAATTTGATAATGTGATTGATACAAATGTAAAAGGAATTGCTAATATTTTGAGACATTTCATTCCACTTATGATTCAAAACAACAATGGAATTATTGTCAATATGTCTTCTGGTGCTGGAAGATCTGCTCATGAAGATTTTGCACCATATTGTTCTTCCAAATGGGCAGTTGAGGGACTAAGTAAATGTATTGCTAAAGGGCTACCAGATGGTATGGCAATTGTTGCATTAAATCCTGGCTCTATACACACTGACATGCTTCATTTATGCCTTGGTGATTCAGCTGCCCAATTTCAATCTCCTCACAAATGGGCTATAAAAGCAGCAACTATGATTCTTGATCTTACTCCAAAAGATAATGGAGAGTCTCTAACAGTCAATAATCCACGTGAACTTTCAACGGCATAA ATGGTTATTGTATATGTACAGAGAGAGAGAGAGAGCGAATCCATGGCGGTGGCGGAACCAAGTAGTTGTTGTCGAAAGGTGTTGATAACAGGTGTTAGCAAAGGGTTAGGAAGAGCCTTAGCCTTGGAGTTAGCAAATCGTGGCCATACAATTATTGGTTGCTCAAGAGATCAAGTTAAACTTGATTCTCTTCAGCAACAACTTTCCACCACTTCTCTAAATCAACATTTCTTCTTCAAACTTGATGTGAAATCAGACAATAATGTTCAAGAATTCGCACAATTTGTTGCCAAAAACAACCTTGTTCCTCATATTCTTGTGAATAATGCAGGTTTGGCACATAAAAGTGCAAAGATATGGGAACTTGACGCAGAAGAATTTGATAATGTGATTGATACAAATGTAAAAGGAATTGCTAATATTTTGAGACATTTCATTCCACTTATGATTCAAAACAACAATGGAATTATTGTCAATATGTCTTCTGGTGCTGGAAGATCTGCTCATGAAGATTTTGCACCATATTGTTCTTCCAAATGGGCAGTTGAGGGACTAAGTAAATGTATTGCTAAAGGGCTACCAGATGGTATGGCAATTGTTGCATTAAATCCTGGCTCTATACACACTGACATGCTTCATTTATGCCTTGGTGATTCAGCTGCCCAATTTCAATCTCCTCACAAATGGGCTATAAAAGCAGCAACTATGATTCTTGATCTTACTCCAAAAGATAATGGAGAGTCTCTAACAGTCAATAATCCACGTGAACTTTCAACGGCATAA MVIVYVQRERESESMAVAEPSSCCRKVLITGVSKGLGRALALELANRGHTIIGCSRDQVKLDSLQQQLSTTSLNQHFFFKLDVKSDNNVQEFAQFVAKNNLVPHILVNNAGLAHKSAKIWELDAEEFDNVIDTNVKGIANILRHFIPLMIQNNNGIIVNMSSGAGRSAHEDFAPYCSSKWAVEGLSKCIAKGLPDGMAIVALNPGSIHTDMLHLCLGDSAAQFQSPHKWAIKAATMILDLTPKDNGESLTVNNPRELSTA
BLAST of CsaV3_5G013950 vs. NCBI nr
Match: XP_004149130.1 (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus] >KGN49562.1 hypothetical protein Csa_5G002570 [Cucumis sativus]) HSP 1 Score: 521.9 bits (1343), Expect = 1.2e-144 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. NCBI nr
Match: XP_008464742.1 (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X3 [Cucumis melo]) HSP 1 Score: 445.3 bits (1144), Expect = 1.5e-121 Identity = 219/234 (93.59%), Postives = 227/234 (97.01%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. NCBI nr
Match: XP_008464740.1 (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucumis melo]) HSP 1 Score: 387.9 bits (995), Expect = 2.8e-104 Identity = 192/228 (84.21%), Postives = 204/228 (89.47%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. NCBI nr
Match: XP_023530640.1 (NADPH-dependent pterin aldehyde reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 382.5 bits (981), Expect = 1.2e-102 Identity = 189/235 (80.43%), Postives = 205/235 (87.23%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. NCBI nr
Match: XP_008464741.1 (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucumis melo]) HSP 1 Score: 374.4 bits (960), Expect = 3.1e-100 Identity = 188/228 (82.46%), Postives = 200/228 (87.72%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. TAIR10
Match: AT1G10310.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 285.8 bits (730), Expect = 2.7e-77 Identity = 140/227 (61.67%), Postives = 179/227 (78.85%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. TAIR10
Match: AT1G67730.1 (beta-ketoacyl reductase 1) HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14 Identity = 54/170 (31.76%), Postives = 93/170 (54.71%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. TAIR10
Match: AT5G04900.1 (NYC1-like) HSP 1 Score: 76.6 bits (187), Expect = 2.5e-14 Identity = 58/201 (28.86%), Postives = 93/201 (46.27%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. TAIR10
Match: AT3G51680.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13 Identity = 58/191 (30.37%), Postives = 92/191 (48.17%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. TAIR10
Match: AT3G04000.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 73.6 bits (179), Expect = 2.1e-13 Identity = 55/222 (24.77%), Postives = 106/222 (47.75%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. Swiss-Prot
Match: sp|Q9SY73|PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1g10310 PE=1 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 4.8e-76 Identity = 140/227 (61.67%), Postives = 179/227 (78.85%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. Swiss-Prot
Match: sp|Q5HPW0|FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=fabG PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.7e-20 Identity = 59/196 (30.10%), Postives = 111/196 (56.63%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. Swiss-Prot
Match: sp|Q8CPI3|FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) OX=176280 GN=fabG PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.7e-20 Identity = 59/196 (30.10%), Postives = 111/196 (56.63%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. Swiss-Prot
Match: sp|Q5HGK2|FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain COL) OX=93062 GN=fabG PE=3 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 4.1e-19 Identity = 57/189 (30.16%), Postives = 108/189 (57.14%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. Swiss-Prot
Match: sp|P0A0H9|FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=fabG PE=1 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.1e-19 Identity = 57/189 (30.16%), Postives = 108/189 (57.14%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. TrEMBL
Match: tr|A0A0A0KMF3|A0A0A0KMF3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G002570 PE=3 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 8.1e-145 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. TrEMBL
Match: tr|A0A1S3CM59|A0A1S3CM59_CUCME (NADPH-dependent pterin aldehyde reductase-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502552 PE=3 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 9.6e-122 Identity = 219/234 (93.59%), Postives = 227/234 (97.01%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. TrEMBL
Match: tr|A0A1S3CNS1|A0A1S3CNS1_CUCME (NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502552 PE=3 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 1.8e-104 Identity = 192/228 (84.21%), Postives = 204/228 (89.47%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. TrEMBL
Match: tr|A0A1S3CMB1|A0A1S3CMB1_CUCME (NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502552 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 2.1e-100 Identity = 188/228 (82.46%), Postives = 200/228 (87.72%), Query Frame = 0
BLAST of CsaV3_5G013950 vs. TrEMBL
Match: tr|A0A1S3CMA0|A0A1S3CMA0_CUCME (NADPH-dependent pterin aldehyde reductase-like OS=Cucumis melo OX=3656 GN=LOC103502554 PE=3 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.6e-84 Identity = 160/233 (68.67%), Postives = 187/233 (80.26%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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