CsaV3_5G013940 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G013940
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5 : 10724166 .. 10724647 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAGAAGATGACAAAGCTTGAGGAGAAAAGAGTGTAGAAGTACGAGAAGAGGAAAACGAAGCAAGCAAGGATAAGCGAACAAGTTGAGACATTGTCTTCCAAACAAAAGTCAATAAGAGGGGAGGATGTCAAGCTAGCTGAAGGGCTTGAGCGTGAGTTCGAGATGATGAGTCTAAAAGAAGAAAAATGGGCCTCGCCTAAAAAGATGAGGAAGAAAGGCGCCGCCAAACCTGAAAACAAGAAAAGAAAAGTAAGGTTGTTATTTTCAAACATGAGGGAAGCCAACCAAGTGGCAAGGGAGTTGAGTCCTCAAAGTCGAGCATTGCCAAGGAAGTGAAGGTCAAGCAGGGCCTCTTACCTTTCAATGAGGCCCTCCCAGAGTCTTTAGACACCTCAATTAAGGCTTTTGGATGGAAGAAGTTCTTTAAGGGGTCCAAGATTCGACTAGAGAGGTTGTCAAGAAATTCTACGCACTAG

mRNA sequence

AAGTACGAGAAGAGGAAAACGAAGCAAGCAAGGATAAGCGAACAAGTTGAGACATTGTCTTCCAAACAAAAGTCAATAAGAGGGGAGGATGTCAAGCTAGCTGAAGGGCTTGAGCGTGAGTTCGAGATGATGAGTCTAAAAGAAGAAAAATGGGCCTCGCCTAAAAAGATGAGGAAGAAAGGCGCCGCCAAACCTGAAAACAAGAAAAGAAAACCAACCAAGTGGCAAGGGAGTTGA

Coding sequence (CDS)

AAGTACGAGAAGAGGAAAACGAAGCAAGCAAGGATAAGCGAACAAGTTGAGACATTGTCTTCCAAACAAAAGTCAATAAGAGGGGAGGATGTCAAGCTAGCTGAAGGGCTTGAGCGTGAGTTCGAGATGATGAGTCTAAAAGAAGAAAAATGGGCCTCGCCTAAAAAGATGAGGAAGAAAGGCGCCGCCAAACCTGAAAACAAGAAAAGAAAACCAACCAAGTGGCAAGGGAGTTGA

Protein sequence

KYEKRKTKQARISEQVETLSSKQKSIRGEDVKLAEGLEREFEMMSLKEEKWASPKKMRKKGAAKPENKKRKPTKWQGS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G013940.1CsaV3_5G013940.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..78

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G013940CSPI05G00110Wild cucumber (PI 183967)cpicucB286
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G013940Wax gourdcucwgoB533
CsaV3_5G013940Silver-seed gourdcarcucB0705
CsaV3_5G013940Cucumber (Gy14) v2cgybcucB232
CsaV3_5G013940Cucumber (Gy14) v1cgycucB424
CsaV3_5G013940Cucurbita maxima (Rimu)cmacucB0880
CsaV3_5G013940Cucurbita moschata (Rifu)cmocucB0865
CsaV3_5G013940Cucurbita pepo (Zucchini)cpecucB0557
CsaV3_5G013940Bottle gourd (USVL1VR-Ls)cuclsiB364
CsaV3_5G013940Melon (DHL92) v3.6.1cucmedB368
CsaV3_5G013940Watermelon (97103) v1cucwmB464
CsaV3_5G013940Watermelon (97103) v2cucwmbB377