CsaV3_5G013890 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G013890
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionNon-specific lipid-transfer protein
Locationchr5 : 10681784 .. 10682010 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCTCAGTTGGCAAATGCAGCGACATGCGACCCAAATGAGATGAGAGTATGTATGTGGGCATACACTACGTCAACAGCGCCATCATCATCTTGTTGTGACATGGTGAGGAAGCATAGATCATGTTATTGTCAATACAAGAAAAATCCGACGTTCCAATCTTATTTACAATCTCCTACCACCAAAAAAATCATCTCTCAATGTGGAATTACCCTTCCCTCTTGCTAG

mRNA sequence

GCTCAGTTGGCAAATGCAGCGACATGCGACCCAAATGAGATGAGAGTATGTATGTGGGCATACACTACGTCAACAGCGCCATCATCATCTTGTTGTGACATGGTGAGGAAGCATAGATCATGTTATTGTCAATACAAGAAAAATCCGACGTTCCAATCTTATTTACAATCTCCTACCACCAAAAAAATCATCTCTCAATGTGGAATTACCCTTCCCTCTTGCTA

Coding sequence (CDS)

GCTCAGTTGGCAAATGCAGCGACATGCGACCCAAATGAGATGAGAGTATGTATGTGGGCATACACTACGTCAACAGCGCCATCATCATCTTGTTGTGACATGGTGAGGAAGCATAGATCATGTTATTGTCAATACAAGAAAAATCCGACGTTCCAATCTTATTTACAATCTCCTACCACCAAAAAAATCATCTCTCAATGTGGAATTACCCTTCCCTCTTGCTA

Protein sequence

AQLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKIISQCGITLPSCX
Homology
[Close]
BLAST of CsaV3_5G013890 vs. NCBI nr
Match: KGN66906.1 (hypothetical protein Csa_1G711160 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 9.9e-15
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 0 

Query: 2  QLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTK 61
          Q++ A  CDP E+R C  ++T S  PSS+CC  V +HR+CYC+Y KNP  Q YL+   T+
Sbjct: 15 QVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQPYLKYDATQ 74

Query: 62 KIISQCGITLPSC 75
          +IIS CG+ +P+C
Sbjct: 75 RIISDCGVAIPTC 87

[Close]
BLAST of CsaV3_5G013890 vs. NCBI nr
Match: XP_023527041.1 (non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-13
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 0 

Query: 1  AQLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTT 60
          A +A A  CDP EMR C+ A  ++  P++ CCD V+K   C C+Y K+P  + YL+SP  
Sbjct: 21 AGVAEAVNCDPTEMRACLPALKSTEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNA 80

Query: 61 KKIISQCGITLPSC 75
          KKI S CGI +P+C
Sbjct: 81 KKIASSCGIPIPTC 94

[Close]
BLAST of CsaV3_5G013890 vs. NCBI nr
Match: OEL33912.1 (hypothetical protein BAE44_0005069 [Dichanthelium oligosanthes])

HSP 1 Score: 83.2 bits (204), Expect = 4.2e-13
Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 0 

Query: 4  ANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKI 63
          A+AA+CD +++  C  A ++  AP+S+CC  ++  RSC+CQY KNP +  Y+ SP  KKI
Sbjct: 25 ASAASCDVSQLAPCAPALSSGAAPTSACCSSLKAQRSCFCQYAKNPAYARYINSPNAKKI 84

Query: 64 ISQCGITLPSC 75
          I+ CG+T+P C
Sbjct: 85 IASCGLTVPRC 95

[Close]
BLAST of CsaV3_5G013890 vs. NCBI nr
Match: CDO98408.1 (unnamed protein product [Coffea canephora])

HSP 1 Score: 82.0 bits (201), Expect = 9.3e-13
Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 1  AQLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTT 60
          A ++ A TC+PNE+  C  A  +S+ PSS CC  +++ + C CQY KNPTF+ ++ SP+ 
Sbjct: 21 ANVSEAVTCNPNELNPCAGAIGSSSPPSSQCCSKIKEQKPCLCQYVKNPTFKQFVASPSA 80

Query: 61 KKIISQCGITLPSC 75
          +K+   CG+ +P C
Sbjct: 81 QKVAKTCGVPIPKC 94

[Close]
BLAST of CsaV3_5G013890 vs. NCBI nr
Match: OAY60437.1 (hypothetical protein MANES_01G112500 [Manihot esculenta])

HSP 1 Score: 82.0 bits (201), Expect = 9.3e-13
Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 0 

Query: 2  QLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTK 61
          +L+NA TC+P+E+  C+ A T+ST PSS+CC  +R+ + C C+Y  NP  + Y+  P  K
Sbjct: 25 RLSNAVTCNPSELSSCLPAVTSSTPPSSTCCSKLREQKPCLCEYMNNPNLKQYINLPGAK 84

Query: 62 KIISQCGITLPSC 75
          ++ S CG+  PSC
Sbjct: 85 RVSSACGVAFPSC 97

[Close]
BLAST of CsaV3_5G013890 vs. TAIR10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 3.3e-12
Identity = 24/67 (35.82%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 8   TCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKIISQC 67
           TCD  ++  C+ A +T   PS+ CC  +++H +C C Y +NP + SY+ SP  +K ++ C
Sbjct: 37  TCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAAC 96

Query: 68  GITLPSC 75
            +  P+C
Sbjct: 97  DVAYPTC 103

[Close]
BLAST of CsaV3_5G013890 vs. TAIR10
Match: AT5G38195.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 6.2e-11
Identity = 24/69 (34.78%), Postives = 40/69 (57.97%), Query Frame = 0 

Query: 6  AATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKIIS 65
          +++C P E+  C+ A TT   P+  CCD + + + C C Y  NP + +++ SP  +K++ 
Sbjct: 27 SSSCIPTELMPCLPAMTTGGQPTKDCCDKLIEQKECLCGYINNPLYSTFVSSPVARKVLE 86

Query: 66 QCGITLPSC 75
           C I  PSC
Sbjct: 87 VCNIPYPSC 95

[Close]
BLAST of CsaV3_5G013890 vs. TAIR10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-10
Identity = 26/73 (35.62%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 2  QLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTK 61
          ++A    C+P ++  C+      + PS  CC  V++ + C CQY KNP F+S+L SP  K
Sbjct: 26 RVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPNFKSFLNSPNAK 85

Query: 62 KIISQCGITLPSC 75
           I + C    P C
Sbjct: 86 IIATDCHCPYPKC 98

[Close]
BLAST of CsaV3_5G013890 vs. TAIR10
Match: AT1G07747.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.7e-08
Identity = 22/68 (32.35%), Postives = 38/68 (55.88%), Query Frame = 0 

Query: 7  ATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKIISQ 66
          A C   +++ C+      T PS+ CC  ++  +SC+C+Y KNP    Y+ S   K+++  
Sbjct: 27 AACVVTDLKACLPDIIGETPPSTKCCTKLKDKKSCFCEYLKNPLIAPYMTS--AKQVLEA 86

Query: 67 CGITLPSC 75
          CG+ +P C
Sbjct: 87 CGVPVPVC 92

[Close]
BLAST of CsaV3_5G013890 vs. TAIR10
Match: AT1G43667.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 2.9e-08
Identity = 21/66 (31.82%), Postives = 39/66 (59.09%), Query Frame = 0 

Query: 9  CDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKIISQCG 68
          C   E++ C+ +    + PS+ CC+ +++  SC+C Y +NP F  Y+ +   K+I++ C 
Sbjct: 35 CTVTELQPCLPSVIDGSQPSTQCCEKLKEQNSCFCDYLQNPQFSQYITA--AKQILAACK 94

Query: 69 ITLPSC 75
          I  P+C
Sbjct: 95 IPYPNC 98

[Close]
BLAST of CsaV3_5G013890 vs. Swiss-Prot
Match: sp|A2XBN5|NLTPX_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 4.5e-11
Identity = 25/68 (36.76%), Postives = 42/68 (61.76%), Query Frame = 0 

Query: 7  ATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKIISQ 66
          A+C+  ++ VC  A      P+++CC  +R  + C+CQ+ K+P +  Y+ SP  +K +S 
Sbjct: 28 ASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSS 87

Query: 67 CGITLPSC 75
          CGI LP+C
Sbjct: 88 CGIALPTC 95

[Close]
BLAST of CsaV3_5G013890 vs. Swiss-Prot
Match: sp|Q10ST8|NLTPX_ORYSJ (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-10
Identity = 25/68 (36.76%), Postives = 41/68 (60.29%), Query Frame = 0 

Query: 7  ATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKIISQ 66
          A C+  ++ VC  A      P+++CC  +R  + C+CQ+ K+P +  Y+ SP  +K +S 
Sbjct: 28 AGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSS 87

Query: 67 CGITLPSC 75
          CGI LP+C
Sbjct: 88 CGIALPTC 95

[Close]
BLAST of CsaV3_5G013890 vs. Swiss-Prot
Match: sp|P82900|NLT2G_WHEAT (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 2.9e-10
Identity = 24/68 (35.29%), Postives = 40/68 (58.82%), Query Frame = 0 

Query: 7  ATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKIISQ 66
          A C  +++ VC  A  +   PS  CC  +R  + C+CQY K+PT+  Y++SP  +  ++ 
Sbjct: 29 AACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTS 88

Query: 67 CGITLPSC 75
          CG+ +P C
Sbjct: 89 CGLAVPHC 96

[Close]
BLAST of CsaV3_5G013890 vs. Swiss-Prot
Match: sp|P82901|NLT2P_WHEAT (Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 8.6e-10
Identity = 23/66 (34.85%), Postives = 38/66 (57.58%), Query Frame = 0 

Query: 9  CDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKIISQCG 68
          C  +++ VC  A  +   PS  CC  +R  + C+CQY K+PT+  Y++SP  +  +  CG
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCG 61

Query: 69 ITLPSC 75
          + +P C
Sbjct: 62 LAVPHC 67

[Close]
BLAST of CsaV3_5G013890 vs. Swiss-Prot
Match: sp|P82353|NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-09
Identity = 23/67 (34.33%), Postives = 38/67 (56.72%), Query Frame = 0 

Query: 8  TCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKIISQC 67
          TC P ++  C+    +     ++CC  +R+ R C C Y KNP+ + Y+ SP  +K+ S C
Sbjct: 2  TCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASNC 61

Query: 68 GITLPSC 75
          G+ +P C
Sbjct: 62 GVPVPQC 68

[Close]
BLAST of CsaV3_5G013890 vs. TrEMBL
Match: tr|A0A0A0M3W7|A0A0A0M3W7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.6e-15
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 0 

Query: 2  QLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTK 61
          Q++ A  CDP E+R C  ++T S  PSS+CC  V +HR+CYC+Y KNP  Q YL+   T+
Sbjct: 15 QVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQPYLKYDATQ 74

Query: 62 KIISQCGITLPSC 75
          +IIS CG+ +P+C
Sbjct: 75 RIISDCGVAIPTC 87

[Close]
BLAST of CsaV3_5G013890 vs. TrEMBL
Match: tr|A0A1E5W950|A0A1E5W950_9POAL (Uncharacterized protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0005069 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-13
Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 0 

Query: 4  ANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTKKI 63
          A+AA+CD +++  C  A ++  AP+S+CC  ++  RSC+CQY KNP +  Y+ SP  KKI
Sbjct: 25 ASAASCDVSQLAPCAPALSSGAAPTSACCSSLKAQRSCFCQYAKNPAYARYINSPNAKKI 84

Query: 64 ISQCGITLPSC 75
          I+ CG+T+P C
Sbjct: 85 IASCGLTVPRC 95

[Close]
BLAST of CsaV3_5G013890 vs. TrEMBL
Match: tr|A0A068TST2|A0A068TST2_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022490001 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.1e-13
Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 1  AQLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTT 60
          A ++ A TC+PNE+  C  A  +S+ PSS CC  +++ + C CQY KNPTF+ ++ SP+ 
Sbjct: 21 ANVSEAVTCNPNELNPCAGAIGSSSPPSSQCCSKIKEQKPCLCQYVKNPTFKQFVASPSA 80

Query: 61 KKIISQCGITLPSC 75
          +K+   CG+ +P C
Sbjct: 81 QKVAKTCGVPIPKC 94

[Close]
BLAST of CsaV3_5G013890 vs. TrEMBL
Match: tr|A0A2C9WL84|A0A2C9WL84_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G112500 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.1e-13
Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 0 

Query: 2  QLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTK 61
          +L+NA TC+P+E+  C+ A T+ST PSS+CC  +R+ + C C+Y  NP  + Y+  P  K
Sbjct: 25 RLSNAVTCNPSELSSCLPAVTSSTPPSSTCCSKLREQKPCLCEYMNNPNLKQYINLPGAK 84

Query: 62 KIISQCGITLPSC 75
          ++ S CG+  PSC
Sbjct: 85 RVSSACGVAFPSC 97

[Close]
BLAST of CsaV3_5G013890 vs. TrEMBL
Match: tr|A0A2P5YU65|A0A2P5YU65_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA01503 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.0e-13
Identity = 31/74 (41.89%), Postives = 50/74 (67.57%), Query Frame = 0 

Query: 1  AQLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTT 60
          +++A A TC+P E+  C+ A+T+S+ PS++CC  ++  + C C Y KNP+ + Y+ SP  
Sbjct: 23 SRMAEAVTCNPTELSPCLSAFTSSSPPSAACCSKLKAQKPCLCGYIKNPSLKQYVNSPNA 82

Query: 61 KKIISQCGITLPSC 75
          KK+ S CG+T P C
Sbjct: 83 KKVASTCGVTYPKC 96

The following BLAST results are available for this feature:
BLAST of CsaV3_5G013890 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66906.19.9e-1549.32hypothetical protein Csa_1G711160 [Cucumis sativus][more]
XP_023527041.11.9e-1347.30non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo][more]
OEL33912.14.2e-1346.48hypothetical protein BAE44_0005069 [Dichanthelium oligosanthes][more]
CDO98408.19.3e-1341.89unnamed protein product [Coffea canephora][more]
OAY60437.19.3e-1343.84hypothetical protein MANES_01G112500 [Manihot esculenta][more]
BLAST of CsaV3_5G013890 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G38160.13.3e-1235.82Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT5G38195.16.2e-1134.78Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G73780.12.4e-1035.62Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G07747.11.7e-0832.35Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G43667.12.9e-0831.82Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
BLAST of CsaV3_5G013890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A2XBN5|NLTPX_ORYSI4.5e-1136.76Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
sp|Q10ST8|NLTPX_ORYSJ1.0e-1036.76Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
sp|P82900|NLT2G_WHEAT2.9e-1035.29Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2[more]
sp|P82901|NLT2P_WHEAT8.6e-1034.85Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1[more]
sp|P82353|NLTP2_PRUAR1.1e-0934.33Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1[more]
BLAST of CsaV3_5G013890 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M3W7|A0A0A0M3W7_CUCSA6.6e-1549.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1[more]
tr|A0A1E5W950|A0A1E5W950_9POAL2.8e-1346.48Uncharacterized protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0005069... [more]
tr|A0A068TST2|A0A068TST2_COFCA6.1e-1341.89Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022490001 PE=4 ... [more]
tr|A0A2C9WL84|A0A2C9WL84_MANES6.1e-1343.84Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G112500 PE=4 SV=... [more]
tr|A0A2P5YU65|A0A2P5YU65_GOSBA8.0e-1341.89Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA01503 PE=4 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: INTERPRO
TermDefinition
IPR036312Bifun_inhib/LTP/seed_sf
IPR033872nsLTP2
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G013890.1CsaV3_5G013890.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 8..74
e-value: 1.6E-19
score: 71.9
NoneNo IPR availablePANTHERPTHR33214:SF11SUBFAMILY NOT NAMEDcoord: 2..74
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 4..72
e-value: 1.2E-5
score: 25.2
IPR033872Non-specific lipid-transfer protein type 2PANTHERPTHR33214FAMILY NOT NAMEDcoord: 2..74
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILYSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 8..74

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G013890Cucumber (Gy14) v2cgybcucB232
CsaV3_5G013890Cucumber (Gy14) v1cgycucB424
CsaV3_5G013890Cucurbita pepo (Zucchini)cpecucB0548
CsaV3_5G013890Cucurbita pepo (Zucchini)cpecucB0557
CsaV3_5G013890Wild cucumber (PI 183967)cpicucB286
CsaV3_5G013890Bottle gourd (USVL1VR-Ls)cuclsiB388
CsaV3_5G013890Melon (DHL92) v3.5.1cucmeB374
CsaV3_5G013890Melon (DHL92) v3.6.1cucmedB364
CsaV3_5G013890Watermelon (Charleston Gray)cucwcgB423
CsaV3_5G013890Watermelon (97103) v1cucwmB421
CsaV3_5G013890Watermelon (97103) v2cucwmbB408
CsaV3_5G013890Wax gourdcucwgoB527