CsaV3_5G013860 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.TTTGATTTGCAAACGGATTCACAAGTTCAATCACAGACTGTTAATCAACTAAAAGCAATAACAGATGGAGGAGAAGGAACGAGCGATGTCAAGCAAAAAGGAGTTGTGGGTAGACCACAACAACAAGGAAAGATGTATGCTCTAGGTCAACGGAAAGTGGAAGAGACACCGAACACATTACTG TTTGATTTGCAAACGGATTCACAAGTTCAATCACAGACTGTTAATCAACTAAAAGCAATAACAGATGGAGGAGAAGGAACGAGCGATGTCAAGCAAAAAGGAGTTGTGGGTAGACCACAACAACAAGGAAAGATGTATGCTCTAGGTCAACGGAAAGTGGAAGAGACACCGAACACATTACTG TTTGATTTGCAAACGGATTCACAAGTTCAATCACAGACTGTTAATCAACTAAAAGCAATAACAGATGGAGGAGAAGGAACGAGCGATGTCAAGCAAAAAGGAGTTGTGGGTAGACCACAACAACAAGGAAAGATGTATGCTCTAGGTCAACGGAAAGTGGAAGAGACACCGAACACATTACTG FDLQTDSQVQSQTVNQLKAITDGGEGTSDVKQKGVVGRPQQQGKMYALGQRKVEETPNTLL
BLAST of CsaV3_5G013860 vs. NCBI nr
Match: KGN49555.1 (hypothetical protein Csa_5G001020 [Cucumis sativus]) HSP 1 Score: 120.2 bits (300), Expect = 2.5e-24 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of CsaV3_5G013860 vs. NCBI nr
Match: XP_016901625.1 (PREDICTED: uncharacterized protein LOC107991320 [Cucumis melo]) HSP 1 Score: 58.9 bits (141), Expect = 6.8e-06 Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of CsaV3_5G013860 vs. TrEMBL
Match: tr|A0A0A0KIM1|A0A0A0KIM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.7e-24 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of CsaV3_5G013860 vs. TrEMBL
Match: tr|A0A1S4E0X6|A0A1S4E0X6_CUCME (uncharacterized protein LOC107991320 OS=Cucumis melo OX=3656 GN=LOC107991320 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.5e-06 Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of CsaV3_5G013860 vs. TrEMBL
Match: tr|A0A1S3CNE9|A0A1S3CNE9_CUCME (uncharacterized protein LOC103502884 OS=Cucumis melo OX=3656 GN=LOC103502884 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 9.4e-04 Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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