CsaV3_5G005680 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAACAAACTCCCAAAAATAAGAGAGAAAAACAAAGCTATAAAATGAGTAACCCATCGTTCTCCAAAAGCATCACGCTTCCTCCAACAACCAAATAAGAAAGAAGAAGAAGAAGAAGAGAACAGCGCTATCGCGGCAGCAGAAACAAGAAAAAGAGAAATGGCGAAATCCATAATCTTATTTGTTTCAGCCCTTTCTCTTTTCTCCCTCCTTAACGTAGCATACTCCCAAAAGGATCGATTCTTGGTGGAGGGAAAAGTATACTGCGATGCATGCCGCGTTCAATTCTTTACCAAAGCCAGCAAATTCCTCGAAGGTAAATTAATTAATTTATTAACTAAGAAAACGGAACCACTAAATTGGAATTGAATTTGAAAACTTTGAAATTGACATGCACAGGTGCGACGGTGAAATTGGTGTGCAAAGAAATTGAAGGAGGAAGCGTGACGCTGAGCAAGGAGGCGGTGACGGATAAAACAGGAAGTTACAGTATTGAAGCGGACGGAGACCACGAGGAAGACTTGTGCGAAGTGACATTGGTGAAGAGCAATGATCCAGATTGCAGTGAGATATCGTTGGAAAAGTATGAACATATGGCAAGAGTGAGCATCACTAATAACAGTGGAATCACCAATCCCGTTCGCCATGCAAACCCACTTGCCTTTATGAAGAAGGAAAAGCTTCCTGAATGCAAAGAAGTTCTTAGAGAGCTTGGATTTGACGAAGAGGGCATCCTTGTTTAAGCTTTAAACAATTATATTATCCTTACCTTCCTCCTTGTTCTCATTCATTCAAACCCACTATTATTAATTAATATATTGATCATATTCCATTTATCATCTTTTCTGATATCCATATACAAAGCACCTCATAATTCCTTCGTCCAAAGAAATTAGAAATTAGATGATCGTAAATTGAGAAACGATACCTTGATTGTTATTTTTGTTGCTTCATCGATAATCTTAGCTATCAATGTAATTCTCCACATACCCTTCTTTTTAAGGAACGCAGCGATCACATAACCTCAACAAATAAGTACATTATCGAACCTTGAACAACCTTCCCACTTGTTGCAAGCTTGCAATGAACTTAATTATTACCTGTATAATCTCAAAGCACCTAATAAAATAACTGATGCTGTCG ATGGCGAAATCCATAATCTTATTTGTTTCAGCCCTTTCTCTTTTCTCCCTCCTTAACGTAGCATACTCCCAAAAGGATCGATTCTTGGTGGAGGGAAAAGTATACTGCGATGCATGCCGCGTTCAATTCTTTACCAAAGCCAGCAAATTCCTCGAAGGTGCGACGGTGAAATTGGTGTGCAAAGAAATTGAAGGAGGAAGCGTGACGCTGAGCAAGGAGGCGGTGACGGATAAAACAGGAAGTTACAGTATTGAAGCGGACGGAGACCACGAGGAAGACTTGTGCGAAGTGACATTGGTGAAGAGCAATGATCCAGATTGCAGTGAGATATCGTTGGAAAAGTATGAACATATGGCAAGAGTGAGCATCACTAATAACAGTGGAATCACCAATCCCGTTCGCCATGCAAACCCACTTGCCTTTATGAAGAAGGAAAAGCTTCCTGAATGCAAAGAAGTTCTTAGAGAGCTTGGATTTGACGAAGAGGGCATCCTTGTTTAA ATGGCGAAATCCATAATCTTATTTGTTTCAGCCCTTTCTCTTTTCTCCCTCCTTAACGTAGCATACTCCCAAAAGGATCGATTCTTGGTGGAGGGAAAAGTATACTGCGATGCATGCCGCGTTCAATTCTTTACCAAAGCCAGCAAATTCCTCGAAGGTGCGACGGTGAAATTGGTGTGCAAAGAAATTGAAGGAGGAAGCGTGACGCTGAGCAAGGAGGCGGTGACGGATAAAACAGGAAGTTACAGTATTGAAGCGGACGGAGACCACGAGGAAGACTTGTGCGAAGTGACATTGGTGAAGAGCAATGATCCAGATTGCAGTGAGATATCGTTGGAAAAGTATGAACATATGGCAAGAGTGAGCATCACTAATAACAGTGGAATCACCAATCCCGTTCGCCATGCAAACCCACTTGCCTTTATGAAGAAGGAAAAGCTTCCTGAATGCAAAGAAGTTCTTAGAGAGCTTGGATTTGACGAAGAGGGCATCCTTGTTTAA MAKSIILFVSALSLFSLLNVAYSQKDRFLVEGKVYCDACRVQFFTKASKFLEGATVKLVCKEIEGGSVTLSKEAVTDKTGSYSIEADGDHEEDLCEVTLVKSNDPDCSEISLEKYEHMARVSITNNSGITNPVRHANPLAFMKKEKLPECKEVLRELGFDEEGILV
BLAST of CsaV3_5G005680 vs. NCBI nr
Match: XP_004143635.1 (PREDICTED: olee1-like protein [Cucumis sativus] >KGN50408.1 hypothetical protein Csa_5G172880 [Cucumis sativus]) HSP 1 Score: 327.8 bits (839), Expect = 2.2e-86 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. NCBI nr
Match: XP_008467237.1 (PREDICTED: olee1-like protein [Cucumis melo]) HSP 1 Score: 318.5 bits (815), Expect = 1.3e-83 Identity = 160/166 (96.39%), Postives = 164/166 (98.80%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. NCBI nr
Match: XP_008450951.1 (PREDICTED: olee1-like protein [Cucumis melo]) HSP 1 Score: 255.0 bits (650), Expect = 1.8e-64 Identity = 129/166 (77.71%), Postives = 143/166 (86.14%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. NCBI nr
Match: XP_004144129.1 (PREDICTED: olee1-like protein [Cucumis sativus] >KGN66323.1 hypothetical protein Csa_1G597700 [Cucumis sativus]) HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64 Identity = 130/166 (78.31%), Postives = 143/166 (86.14%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. NCBI nr
Match: XP_022988307.1 (olee1-like protein [Cucurbita maxima]) HSP 1 Score: 252.7 bits (644), Expect = 8.8e-64 Identity = 124/166 (74.70%), Postives = 143/166 (86.14%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. TAIR10
Match: AT4G18596.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 155.6 bits (392), Expect = 2.7e-38 Identity = 83/156 (53.21%), Postives = 106/156 (67.95%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. TAIR10
Match: AT1G29140.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 153.7 bits (387), Expect = 1.0e-37 Identity = 81/164 (49.39%), Postives = 114/164 (69.51%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. TAIR10
Match: AT5G45880.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 152.5 bits (384), Expect = 2.3e-37 Identity = 84/167 (50.30%), Postives = 109/167 (65.27%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. TAIR10
Match: AT4G08685.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 106.3 bits (264), Expect = 1.9e-23 Identity = 59/155 (38.06%), Postives = 91/155 (58.71%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. TAIR10
Match: AT1G78040.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 96.3 bits (238), Expect = 1.9e-20 Identity = 59/167 (35.33%), Postives = 95/167 (56.89%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. Swiss-Prot
Match: sp|O49813|OLEE1_BETPN (Olee1-like protein OS=Betula pendula OX=3505 PE=2 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 7.4e-46 Identity = 91/166 (54.82%), Postives = 121/166 (72.89%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. Swiss-Prot
Match: sp|Q8LGR0|CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album OX=3559 PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 2.6e-38 Identity = 79/156 (50.64%), Postives = 109/156 (69.87%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. Swiss-Prot
Match: sp|P13447|LAT52_SOLLC (Anther-specific protein LAT52 OS=Solanum lycopersicum OX=4081 GN=LAT52 PE=2 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.3e-37 Identity = 88/158 (55.70%), Postives = 108/158 (68.35%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. Swiss-Prot
Match: sp|Q6NMJ2|OLE96_ARATH (Pollen-specific protein-like At4g18596 OS=Arabidopsis thaliana OX=3702 GN=At4g18596 PE=2 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 4.8e-37 Identity = 83/156 (53.21%), Postives = 106/156 (67.95%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. Swiss-Prot
Match: sp|Q7M1X5|LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne OX=4522 PE=1 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.4e-28 Identity = 65/129 (50.39%), Postives = 84/129 (65.12%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. TrEMBL
Match: tr|A0A0A0KLB5|A0A0A0KLB5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172880 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.4e-86 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. TrEMBL
Match: tr|A0A1S3CT96|A0A1S3CT96_CUCME (olee1-like protein OS=Cucumis melo OX=3656 GN=LOC103504637 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 8.7e-84 Identity = 160/166 (96.39%), Postives = 164/166 (98.80%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. TrEMBL
Match: tr|A0A1S3BQG3|A0A1S3BQG3_CUCME (olee1-like protein OS=Cucumis melo OX=3656 GN=LOC103492388 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 1.2e-64 Identity = 129/166 (77.71%), Postives = 143/166 (86.14%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. TrEMBL
Match: tr|A0A0A0LX09|A0A0A0LX09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597700 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 2.0e-64 Identity = 130/166 (78.31%), Postives = 143/166 (86.14%), Query Frame = 0
BLAST of CsaV3_5G005680 vs. TrEMBL
Match: tr|A0A1S3B041|A0A1S3B041_CUCME (olee1-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484449 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 9.4e-54 Identity = 109/168 (64.88%), Postives = 131/168 (77.98%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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