CsaV3_5G005530 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G005530
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	60S ribosomal protein L7a
Location	chr5 : 3575783 .. 3578255 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGTCTTCTTCCTACAAAACCCTAGCACTTCCCCCCGCCTTCTTAACACTCCCCTTCTCTTTCGTTCTTCTTGCCAGTTTTACATCGCCTCTTGCAGCAGCGCCAAAACAATGGCACCGAAGAAGGCTGTTGGAAAAGTTTCAGCAAAGAAGAAGACGGTAAATCCATTTTTTTATGCGAGATTCTTGTTTCAGTTCTCTAATGCTTTGTTTTTAACACTGCGTTGGATTCTTTGCAGGAGAAAGTGGTGAACCCGCTATTTGAGAAGCGTCCAAAGCAGTTTGGAATTGGTGGGGCTTTGCCACCTAAGAGGGATCTCACACGATTTGTCAAATGGCCCAAGGTTGTTCAAATTCAAAGGAAGAAGAGGATTCTGAAGCAGAGGCTCAAGGTTCCACCAGCTTTGAATCAGTTCACCAAGACCCTTGACAAGAATCTTGGTAATGATTAAACTCTAAATTCTCACGGAGATTCCTATTACATTGTTAGTGTTTTTCGGTCTTCTGTTTATACTTTTTTTGTGTTTTCAACTGGAATATTTGTTATGAAGTATGAACTATGTTAGGATATTGGTGGGCTAGGTTGTATGAATGCATTTAATTTAGGAGAGGTGTAGAAGTTTCTGCTATGGTGAAAGAAATAAGTAGTTCCATACCTTATTGATTGATGGTTTGGTTTGGGTACCTTGAGATGAGATGACTATGTTTTGATGGCAATGCAAGTTCATTTGGGAATTGGTAGTAAGCTTCAGTCTCTTGGAACCTTAATTCTTGTCTGAACCTTTTTTTTTCTCCTTAGGTAACTTGGATTATTCTGCTTAGATCTTCTCACATTTTGGGTTATTTAGTCATTCTAGTGATTGTATTGAAATGGTCCTCTTTATAGTACACGGTTGTGAATGAAATGTTTCATTTTTGTACATTCCATTTTGGTCATTTGGAAAATTTTGACCTGATTCCATGTGGTTTTGATTAGATTTAAGGTATATTTTGAATTTTGCTTATCTCATCTTCTATGTGGTTCTTCGATAGTTGTTGGAATGTCCTTAGATGGTTGGTTTTAAAAGCCTTTCCATTCATTTTCAGCAACAAACTTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGATAAAACACAGAAAAAGGAGCGTCTTCTGAAAAGAGCTCAGGAAGAAGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATTGTTGTTAAATATGGTCTCAACCATGTTACCTACCTCATTGAGCAGGTCATCTTTTATTCCATACATTTGAAATATTTCACTATTATGCAATCAGATACACTCCTTTTATTCTTAACATCCATATATTATTACTTTATTTTCAGAACAAGGCACAACTGGTTGTGATTGCACACGATGTGGATCCAATTGAGTTGGTTGTATGGCTCCCAGCTCTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGTTTGGGAGCGGTAAGTTGGTATCCATGTCTCTTTATTTGCCACTCCTTTGAAGCCATGGATTTTTGTAACTTTTCCTTTTAATAACAGGTTGTCCACCAAAAGACTGCATCAGTTTTGTGTTTAACAACAGTGAAAAATGAAGATAAGATGGAGTTTAGCAGGATCCTGGAAGCCATTAAGGTGCCTTACACACACATAAAACCTGGATATGATCCAAGTTTATTTTATAGCATCCGAATTAGGTTCATATCTAACAACTTGTTTGTTGTTTTGTTTTATGTTAAGGCTAATTTCAACGACAAGTACGACGAATACAGAAAGAAGTGGGGCGGTGGAATCATGGGATCCAAGTCTCAGGCAAAAACTAAGGCAAAGGAGAAATTACTGGCCAAAGAAGCTGCTCAAAGGATGTCTTAGGTAATCAGAGTTGTTCTTTTGTAACTCTGCTGAATTTTATTTTATGAGAAAAACTGAGACACCAATTCTTTTTGGTATGTAGTTTAACTCCATCAGTAGAATTTTGAAGTTTTGTTTACTTTTAAGAGAACTTGATGTAGTATTTTCTCCATGTAAACCTC

mRNA sequence

ATGGCACCGAAGAAGGCTGTTGGAAAAGTTTCAGCAAAGAAGAAGACGGAGAAAGTGGTGAACCCGCTATTTGAGAAGCGTCCAAAGCAGTTTGGAATTGGTGGGGCTTTGCCACCTAAGAGGGATCTCACACGATTTGTCAAATGGCCCAAGGTTGTTCAAATTCAAAGGAAGAAGAGGATTCTGAAGCAGAGGCTCAAGGTTCCACCAGCTTTGAATCAGTTCACCAAGACCCTTGACAAGAATCTTGCAACAAACTTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGATAAAACACAGAAAAAGGAGCGTCTTCTGAAAAGAGCTCAGGAAGAAGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATTGTTGTTAAATATGGTCTCAACCATGTTACCTACCTCATTGAGCAGAACAAGGCACAACTGGTTGTGATTGCACACGATGTGGATCCAATTGAGTTGGTTGTATGGCTCCCAGCTCTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGTTTGGGAGCGGTTGTCCACCAAAAGACTGCATCAGTTTTGTGTTTAACAACAGTGAAAAATGAAGATAAGATGGAGTTTAGCAGGATCCTGGAAGCCATTAAGGCTAATTTCAACGACAAGTACGACGAATACAGAAAGAAGTGGGGCGGTGGAATCATGGGATCCAAGTCTCAGGCAAAAACTAAGGCAAAGGAGAAATTACTGGCCAAAGAAGCTGCTCAAAGGATGTCTTAG

Coding sequence (CDS)

ATGGCACCGAAGAAGGCTGTTGGAAAAGTTTCAGCAAAGAAGAAGACGGAGAAAGTGGTGAACCCGCTATTTGAGAAGCGTCCAAAGCAGTTTGGAATTGGTGGGGCTTTGCCACCTAAGAGGGATCTCACACGATTTGTCAAATGGCCCAAGGTTGTTCAAATTCAAAGGAAGAAGAGGATTCTGAAGCAGAGGCTCAAGGTTCCACCAGCTTTGAATCAGTTCACCAAGACCCTTGACAAGAATCTTGCAACAAACTTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGATAAAACACAGAAAAAGGAGCGTCTTCTGAAAAGAGCTCAGGAAGAAGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATTGTTGTTAAATATGGTCTCAACCATGTTACCTACCTCATTGAGCAGAACAAGGCACAACTGGTTGTGATTGCACACGATGTGGATCCAATTGAGTTGGTTGTATGGCTCCCAGCTCTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGTTTGGGAGCGGTTGTCCACCAAAAGACTGCATCAGTTTTGTGTTTAACAACAGTGAAAAATGAAGATAAGATGGAGTTTAGCAGGATCCTGGAAGCCATTAAGGCTAATTTCAACGACAAGTACGACGAATACAGAAAGAAGTGGGGCGGTGGAATCATGGGATCCAAGTCTCAGGCAAAAACTAAGGCAAAGGAGAAATTACTGGCCAAAGAAGCTGCTCAAAGGATGTCTTAG

Protein sequence

MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS

Homology

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BLAST of CsaV3_5G005530 vs. NCBI nr
Match: XP_004143647.1 (PREDICTED: 60S ribosomal protein L7a-like [Cucumis sativus] >KGN50392.1 hypothetical protein Csa_5G171740 [Cucumis sativus])

HSP 1 Score: 494.6 bits (1272), Expect = 2.1e-136
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKEKLLAKEAAQRMS
Sbjct: 241 TKAKEKLLAKEAAQRMS 257

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BLAST of CsaV3_5G005530 vs. NCBI nr
Match: XP_008467259.1 (PREDICTED: 60S ribosomal protein L7a-2 [Cucumis melo])

HSP 1 Score: 489.6 bits (1259), Expect = 6.6e-135
Identity = 254/257 (98.83%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKKAVGKVSAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKVSAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQK+ERLLKRAQEEAEGKSHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKRAQEEAEGKSHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAVVH+KTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKEKLLAKEAAQRMS
Sbjct: 241 TKAKEKLLAKEAAQRMS 257

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BLAST of CsaV3_5G005530 vs. NCBI nr
Match: XP_022157908.1 (60S ribosomal protein L7a-2 [Momordica charantia])

HSP 1 Score: 483.0 bits (1242), Expect = 6.2e-133
Identity = 249/257 (96.89%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKKAVGK SAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPK VQIQRKKR
Sbjct: 1   MAPKKAVGKASAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDK QKKERLLKRAQEEAEGK+HD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKKERLLKRAQEEAEGKAHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGA+VH+KTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKEKLLAKEAAQRMS
Sbjct: 241 TKAKEKLLAKEAAQRMS 257

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BLAST of CsaV3_5G005530 vs. NCBI nr
Match: XP_022995921.1 (60S ribosomal protein L7a-2-like [Cucurbita maxima] >XP_023534150.1 60S ribosomal protein L7a-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482.3 bits (1240), Expect = 1.1e-132
Identity = 249/257 (96.89%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKKAVGKVSAKKK  KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPK VQIQRKKR
Sbjct: 1   MAPKKAVGKVSAKKKPVKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDK QK+ERLLKRAQEEAEGKSHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGA+VHQKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKE+LLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

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BLAST of CsaV3_5G005530 vs. NCBI nr
Match: XP_022958469.1 (60S ribosomal protein L7a-2-like [Cucurbita moschata])

HSP 1 Score: 481.1 bits (1237), Expect = 2.4e-132
Identity = 248/257 (96.50%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKKAVGK+SAKKK  KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPK VQIQRKKR
Sbjct: 1   MAPKKAVGKLSAKKKPVKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDK QK+ERLLKRAQEEAEGKSHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGA+VHQKTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKE+LLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

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BLAST of CsaV3_5G005530 vs. TAIR10
Match: AT2G47610.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 434.1 bits (1115), Expect = 6.0e-122
Identity = 222/258 (86.05%), Postives = 247/258 (95.74%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKT-EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKK 60
           MAPKK V KV+AKKKT EKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK +++QR+K
Sbjct: 1   MAPKKGV-KVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQK 60

Query: 61  RILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSH 120
           RILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK  KKERL+K+AQ EAEGK  
Sbjct: 61  RILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPS 120

Query: 121 DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKA 180
           ++KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+
Sbjct: 121 ESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKS 180

Query: 181 RLGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQA 240
           RLGAVVHQKTAS LCLTTVKNEDK+EFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQA
Sbjct: 181 RLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQA 240

Query: 241 KTKAKEKLLAKEAAQRMS 258
           KTKAKE+++AKEAAQRM+
Sbjct: 241 KTKAKERVIAKEAAQRMN 257

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BLAST of CsaV3_5G005530 vs. TAIR10
Match: AT3G62870.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 434.1 bits (1115), Expect = 6.0e-122
Identity = 219/257 (85.21%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKK V KV++KKK EKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK +++QR+KR
Sbjct: 1   MAPKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK  KKERLL +AQ EAEGK  +
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAE 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 121 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAVVHQKTA+ LCLTTVKNEDK+EFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKE+++AKEAAQRM+
Sbjct: 241 TKAKERVIAKEAAQRMN 256

[Close]

BLAST of CsaV3_5G005530 vs. TAIR10
Match: AT4G22380.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 43.1 bits (100), Expect = 3.0e-04
Identity = 21/79 (26.58%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 127 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAVVH 186
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 187 QKTASVLCLTTVKNEDKME 206
                + C  T     +++
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

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BLAST of CsaV3_5G005530 vs. Swiss-Prot
Match: sp|P35685|RL7A1_ORYSJ (60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 4.4e-122
Identity = 226/258 (87.60%), Postives = 245/258 (94.96%), Query Frame = 0


Query: 1   MAPKK-AVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKK 60
           MAPK+     V AKKKTEKV NPLFEKRPKQFGIGGALPPK+DL RFVKWPKVV+IQR++
Sbjct: 1   MAPKRGGRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQR 60

Query: 61  RILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSH 120
           RILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDK  KKERLLKRAQ EAEGK+ 
Sbjct: 61  RILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTV 120

Query: 121 DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKA 180
           +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKA
Sbjct: 121 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKA 180

Query: 181 RLGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQA 240
           RLG++VH+KTASVLCLTTVKNEDK+EFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQA
Sbjct: 181 RLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQA 240

Query: 241 KTKAKEKLLAKEAAQRMS 258
           KTKA+EKLLAKEAAQRM+
Sbjct: 241 KTKAREKLLAKEAAQRMT 258

[Close]

BLAST of CsaV3_5G005530 vs. Swiss-Prot
Match: sp|P0DKK7|RL7A2_ORYSJ (60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 PE=2 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 4.4e-122
Identity = 226/258 (87.60%), Postives = 245/258 (94.96%), Query Frame = 0


Query: 1   MAPKK-AVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKK 60
           MAPK+     V AKKKTEKV NPLFEKRPKQFGIGGALPPK+DL RFVKWPKVV+IQR++
Sbjct: 1   MAPKRGGRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQR 60

Query: 61  RILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSH 120
           RILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDK  KKERLLKRAQ EAEGK+ 
Sbjct: 61  RILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTV 120

Query: 121 DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKA 180
           +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKA
Sbjct: 121 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKA 180

Query: 181 RLGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQA 240
           RLG++VH+KTASVLCLTTVKNEDK+EFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQA
Sbjct: 181 RLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQA 240

Query: 241 KTKAKEKLLAKEAAQRMS 258
           KTKA+EKLLAKEAAQRM+
Sbjct: 241 KTKAREKLLAKEAAQRMT 258

[Close]

BLAST of CsaV3_5G005530 vs. Swiss-Prot
Match: sp|P49692|RL7A1_ARATH (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2)

HSP 1 Score: 434.1 bits (1115), Expect = 1.1e-120
Identity = 222/258 (86.05%), Postives = 247/258 (95.74%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKT-EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKK 60
           MAPKK V KV+AKKKT EKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK +++QR+K
Sbjct: 1   MAPKKGV-KVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQK 60

Query: 61  RILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSH 120
           RILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK  KKERL+K+AQ EAEGK  
Sbjct: 61  RILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPS 120

Query: 121 DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKA 180
           ++KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+
Sbjct: 121 ESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKS 180

Query: 181 RLGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQA 240
           RLGAVVHQKTAS LCLTTVKNEDK+EFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQA
Sbjct: 181 RLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQA 240

Query: 241 KTKAKEKLLAKEAAQRMS 258
           KTKAKE+++AKEAAQRM+
Sbjct: 241 KTKAKERVIAKEAAQRMN 257

[Close]

BLAST of CsaV3_5G005530 vs. Swiss-Prot
Match: sp|Q9LZH9|RL7A2_ARATH (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=2 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.1e-120
Identity = 219/257 (85.21%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKK V KV++KKK EKV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK +++QR+KR
Sbjct: 1   MAPKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDK  KKERLL +AQ EAEGK  +
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAE 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 121 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAVVHQKTA+ LCLTTVKNEDK+EFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKE+++AKEAAQRM+
Sbjct: 241 TKAKERVIAKEAAQRMN 256

[Close]

BLAST of CsaV3_5G005530 vs. Swiss-Prot
Match: sp|O57592|RL7A_TAKRU (60S ribosomal protein L7a OS=Takifugu rubripes OX=31033 GN=rpl7a PE=3 SV=3)

HSP 1 Score: 288.5 bits (737), Expect = 7.3e-77
Identity = 151/261 (57.85%), Postives = 196/261 (75.10%), Query Frame = 0


Query: 4   KKAVGK-------VSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQ 63
           KKA GK       V+ K + +KVVNPLFEKRPK FGIG  + PKRDLTRFVKWP+ +++Q
Sbjct: 5   KKAKGKKVAPAPSVAKKHEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQ 64

Query: 64  RKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEG 123
           R++ IL +RLKVPPA+NQFT+ LD+  AT LFK+  KYRPE K +KK+RLL RA+++A G
Sbjct: 65  RQRSILYKRLKVPPAINQFTQALDRQTATQLFKLAHKYRPETKQEKKKRLLARAEQKAAG 124

Query: 124 KSH-DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIV 183
           K     K+P V++ G+N +T L+E  KAQLVVIAHDVDPIELV++LPALCRKM +PYCIV
Sbjct: 125 KGDAPTKRPPVLRAGVNTITSLVENKKAQLVVIAHDVDPIELVIFLPALCRKMGVPYCIV 184

Query: 184 KGKARLGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGS 243
           KGKARLG +VH+KT + +  T    EDK   ++++EAIK N+ND+Y+E R+ WGGGI+G 
Sbjct: 185 KGKARLGRLVHRKTCTSVAFTQTNPEDKGALAKLVEAIKTNYNDRYEEIRRHWGGGILGP 244

Query: 244 KSQAKTKAKEKLLAKEAAQRM 257
           KS A+    EK  AKE A ++
Sbjct: 245 KSTARINKLEKAKAKELATKL 265

[Close]

BLAST of CsaV3_5G005530 vs. TrEMBL
Match: tr|A0A0A0KPQ6|A0A0A0KPQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171740 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 1.4e-136
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKEKLLAKEAAQRMS
Sbjct: 241 TKAKEKLLAKEAAQRMS 257

[Close]

BLAST of CsaV3_5G005530 vs. TrEMBL
Match: tr|A0A1S3CUE8|A0A1S3CUE8_CUCME (60S ribosomal protein L7a-2 OS=Cucumis melo OX=3656 GN=LOC103504656 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 4.4e-135
Identity = 254/257 (98.83%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKKAVGKVSAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKVSAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQK+ERLLKRAQEEAEGKSHD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKRAQEEAEGKSHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LGAVVH+KTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGAVVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKEKLLAKEAAQRMS
Sbjct: 241 TKAKEKLLAKEAAQRMS 257

[Close]

BLAST of CsaV3_5G005530 vs. TrEMBL
Match: tr|A0A0A0KRP5|A0A0A0KRP5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171730 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 5.9e-132
Identity = 247/257 (96.11%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKKAVGKVSAKKK +KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKVSAKKKLDKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQK+ERLLKRAQEEAEGK+ D
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKRERLLKRAQEEAEGKTLD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LG++VH+KTASVLCLTTVKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKE+LLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of CsaV3_5G005530 vs. TrEMBL
Match: tr|A0A1S3CT56|A0A1S3CT56_CUCME (60S ribosomal protein L7a-1 OS=Cucumis melo OX=3656 GN=LOC103504657 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 7.8e-132
Identity = 247/257 (96.11%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKKAVGKVSAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKVSAKKKLEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED+TQK+ERLLKRAQEEAEGKS D
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRTQKRERLLKRAQEEAEGKSLD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LG++VH+KTASVLCLTTVKNEDK+EFSRILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 181 LGSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKE+LLAKEAAQRMS
Sbjct: 241 TKAKERLLAKEAAQRMS 257

[Close]

BLAST of CsaV3_5G005530 vs. TrEMBL
Match: tr|A0A0A0LBU9|A0A0A0LBU9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G563300 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.7e-131
Identity = 245/257 (95.33%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   MAPKKAVGKVSAKKKTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKR 60
           MAPKKAVGK  AKKK EKVVNPLFEKRPKQFGIGGA+PPKRDLTRFVKWPKVVQIQRKKR
Sbjct: 1   MAPKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKR 60

Query: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHD 120
           ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPED++QK+ERLLKRAQEEA+GK HD
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHD 120

Query: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180
           AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR
Sbjct: 121 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 180

Query: 181 LGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240
           LG++VH+KTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK
Sbjct: 181 LGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 240

Query: 241 TKAKEKLLAKEAAQRMS 258
           TKAKEKLLAKEAAQRMS
Sbjct: 241 TKAKEKLLAKEAAQRMS 257

The following BLAST results are available for this feature:

BLAST of CsaV3_5G005530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143647.1	2.1e-136	100.00	PREDICTED: 60S ribosomal protein L7a-like [Cucumis sativus] >KGN50392.1 hypothet...	[more]
XP_008467259.1	6.6e-135	98.83	PREDICTED: 60S ribosomal protein L7a-2 [Cucumis melo]	[more]
XP_022157908.1	6.2e-133	96.89	60S ribosomal protein L7a-2 [Momordica charantia]	[more]
XP_022995921.1	1.1e-132	96.89	60S ribosomal protein L7a-2-like [Cucurbita maxima] >XP_023534150.1 60S ribosoma...	[more]
XP_022958469.1	2.4e-132	96.50	60S ribosomal protein L7a-2-like [Cucurbita moschata]	[more]

BLAST of CsaV3_5G005530 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47610.1	6.0e-122	86.05	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT3G62870.1	6.0e-122	85.21	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G22380.1	3.0e-04	26.58	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

BLAST of CsaV3_5G005530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P35685\|RL7A1_ORYSJ	4.4e-122	87.60	60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 ...	[more]
sp\|P0DKK7\|RL7A2_ORYSJ	4.4e-122	87.60	60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 ...	[more]
sp\|P49692\|RL7A1_ARATH	1.1e-120	86.05	60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2	[more]
sp\|Q9LZH9\|RL7A2_ARATH	1.1e-120	85.21	60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=2 SV=1	[more]
sp\|O57592\|RL7A_TAKRU	7.3e-77	57.85	60S ribosomal protein L7a OS=Takifugu rubripes OX=31033 GN=rpl7a PE=3 SV=3	[more]

BLAST of CsaV3_5G005530 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KPQ6\|A0A0A0KPQ6_CUCSA	1.4e-136	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171740 PE=4 SV=1	[more]
tr\|A0A1S3CUE8\|A0A1S3CUE8_CUCME	4.4e-135	98.83	60S ribosomal protein L7a-2 OS=Cucumis melo OX=3656 GN=LOC103504656 PE=4 SV=1	[more]
tr\|A0A0A0KRP5\|A0A0A0KRP5_CUCSA	5.9e-132	96.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171730 PE=4 SV=1	[more]
tr\|A0A1S3CT56\|A0A1S3CT56_CUCME	7.8e-132	96.11	60S ribosomal protein L7a-1 OS=Cucumis melo OX=3656 GN=LOC103504657 PE=4 SV=1	[more]
tr\|A0A0A0LBU9\|A0A0A0LBU9_CUCSA	1.7e-131	95.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G563300 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0042254	ribosome biogenesis

Vocabulary: **Cellular Component**
Term	Definition
GO:1990904	ribonucleoprotein complex

Vocabulary: **INTERPRO**
Term	Definition
IPR029064	L30e-like
IPR004037	Ribosomal_L7Ae_CS
IPR038524	Ribosomal_L7A/L8_sf
IPR004038	Ribosomal_L7Ae/L30e/S12e/Gad45
IPR018492	Ribosomal_L7Ae/L8/Nhp2
IPR001921	Ribosomal_L7A/L8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G005530.1	CsaV3_5G005530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 249..257
None	No IPR available	PANTHER	PTHR23105:SF70	60S RIBOSOMAL PROTEIN L7A-1-RELATED	coord: 8..257
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 8..257
IPR001921	Ribosomal protein L7A/L8	PRINTS	PR00882	RIBOSOMALL7A	coord: 184..208 score: 48.0 coord: 45..62 score: 60.61 coord: 28..45 score: 71.21 coord: 123..143 score: 62.77 coord: 216..236 score: 68.4 coord: 89..102 score: 59.09 coord: 65..84 score: 74.09
IPR018492	Ribosomal protein L7Ae/L8/Nhp2 family	PRINTS	PR00881	L7ARS6FAMILY	coord: 162..172 score: 64.46 coord: 172..186 score: 56.67 coord: 146..159 score: 71.43 coord: 127..141 score: 45.76
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 114..205 e-value: 8.8E-26 score: 89.4
IPR038524	Ribosomal protein L7A/L8 superfamily	GENE3D	G3DSA:3.30.1330.210		coord: 49..232 e-value: 8.6E-89 score: 298.0
IPR004037	Ribosomal protein L7Ae conserved site	PROSITE	PS01082	RIBOSOMAL_L7AE	coord: 165..182
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	SSF55315	L30e-like	coord: 89..222

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G005530	Cucumber (Chinese Long) v3	cuccucB122
CsaV3_5G005530	Silver-seed gourd	carcucB0752
CsaV3_5G005530	Silver-seed gourd	carcucB0776
CsaV3_5G005530	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G005530	Cucumber (Gy14) v1	cgycucB153
CsaV3_5G005530	Cucumber (Gy14) v1	cgycucB395
CsaV3_5G005530	Cucurbita maxima (Rimu)	cmacucB0341
CsaV3_5G005530	Cucurbita maxima (Rimu)	cmacucB0731
CsaV3_5G005530	Cucurbita moschata (Rifu)	cmocucB0336
CsaV3_5G005530	Cucurbita moschata (Rifu)	cmocucB0719
CsaV3_5G005530	Cucurbita pepo (Zucchini)	cpecucB0224
CsaV3_5G005530	Cucurbita pepo (Zucchini)	cpecucB0916
CsaV3_5G005530	Wild cucumber (PI 183967)	cpicucB285
CsaV3_5G005530	Bottle gourd (USVL1VR-Ls)	cuclsiB345
CsaV3_5G005530	Bottle gourd (USVL1VR-Ls)	cuclsiB405
CsaV3_5G005530	Melon (DHL92) v3.5.1	cucmeB360
CsaV3_5G005530	Melon (DHL92) v3.5.1	cucmeB414
CsaV3_5G005530	Melon (DHL92) v3.6.1	cucmedB352
CsaV3_5G005530	Watermelon (Charleston Gray)	cucwcgB385
CsaV3_5G005530	Watermelon (97103) v1	cucwmB427
CsaV3_5G005530	Watermelon (97103) v1	cucwmB436
CsaV3_5G005530	Watermelon (97103) v2	cucwmbB351
CsaV3_5G005530	Wax gourd	cucwgoB454