CsaV3_5G000930 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAAAACCCTATTAATTAAATTAATATTTTTTATATATACACAGAAGACATGAACTTTCACAATTACATCATATCCTTCCCTCATAGGCTCATAGCAGATGGCCAACAGCCTTCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCCAGATCTTCCTTCAAATTATAATATCATAACTTCACAAAACTAAGCTCATCACTGTCAGCCATGGAAGCTTCTTCTCAACCTCTATCCATAGAAAGCTTCTCATATAGTTGGTTAGTGAACATGAGATCATCCTTTGAAATTAGTTGTGCCAATTCCTTTAGAACCTCTCTTGATGAAGCTTCCTTCATTGAAATGGATCCTACAATGCCACCTTCCAAGAGATTCTACTTCACTAATTCCTCTCGCCGTTCTAACGACTTCAAGTTCCCAGCTCCTCTCTCCCCGTCTCCCTCTCTCCCTCTCGTTCACGCCGACCAGCTCATCTCCAACGGCTACCTCGTCCCCGTATAACTCTCTCTCGTATCGAAACTCTTAACCCCTTTTTGCATTTTCTCTAATTAATGTAAACTTTTTTTCTTTTCCTTCTAAATTATAGTTGCAAGTGTTCGAGGGCGTATCGGGTGTCATGATCGGTTCACCTGATGCAGTTAAGCTCGTAGCGGAGCCACCAGGAAAATCTGCAGAGTCGTTGAGGAAGTCGTGCAGGAGATTATCAAGGCAGATTTTCCAGAAATATTTGAACTTTTTAAGGCCACTTTGTAGAAGGATTCAAAGGGTGGGAAATTATGGGAATAATACTAATGGTAAATTAGGAGGGAAGAAATTGTTGTTCCATGGTGGAAAATATACTAATACTACTACTACTACCACAAGGGAAGCTCATCATCAGTGTATTGATGAATGGAGAAGATCTTCTTGTGATTCTGAGACCTCAATTTATGATGCAGTTCTTCACTGCAAAAACTCCATAGGTCTGTCTGTCTCTCTCTCTCTCTCTCATTTTAATTTCATTTTCCTCATCATTTCTCCAAATATATTAAAATTTGTTGAGATTAATCTGCTTAATTACCATAAGTACTATATATTCTTAGGCTTTCTTACTGTTGGGTCGGATGAAATTGTTGAGAGTAAAACCAAAGTCAAAATCTTTATTGTTACATAGAAGATGATTTTCTTGGTACGTATGAGGCCTCTTTTAGGTGAAACAAAAATCAGAGTGCTACGAAGAATATAATCATTAACATTGAATATTGTCATAAGGAGATGATATGTTTGTTAGAATAATTAATGTAATTTTTTCCTAATTAATTAAGTGGTAGCAGTTCCATCATAATTTATATACATGGTGGGTGCCTGTTATATAAATCTAAATTAAGACGTACTACGACAAAAGTTCTAGTGAATCAAATTAATTGATATTTGAAGCTGGTACACTACGCTTCTTTCCTGTTAAACATCACTTGAAACTTACTTTTAACCATTCAAAAACATATCAACCTTGAAAATCGTTTAAAAACCTAAGAAGCCAACATTCCTTTTATATGATTCTTATATATATATAAGGGTGGAAGGATTATATTCACATCAACACACACATGCATGGCTTGAAAATTGTTTGATATTTGTTCAGGAAAATGAAGAGGGAGAAGAGAGCAAGGAAGGGGCCTGGGGAAGGGAAAAAAGGATGATGATGATGATGATGATGAACATAGGGACAGTACAGTTGTTGTTTGTCTGTTGTTAATTTCTGTTTGTGTAAGTTTGTGGGGATATATATGGAAAAAATGCAATAGTACTGTTTGTGTTTTGTCATTGTGAGAGTAAAGAAAAGAATCTGTTTTGGATTATGAGAGTGGAAAAATTGTGGCCTTTGATGGAAAGGTGAAAAAGGCA ATGGAAGCTTCTTCTCAACCTCTATCCATAGAAAGCTTCTCATATAGTTGGTTAGTGAACATGAGATCATCCTTTGAAATTAGTTGTGCCAATTCCTTTAGAACCTCTCTTGATGAAGCTTCCTTCATTGAAATGGATCCTACAATGCCACCTTCCAAGAGATTCTACTTCACTAATTCCTCTCGCCGTTCTAACGACTTCAAGTTCCCAGCTCCTCTCTCCCCGTCTCCCTCTCTCCCTCTCGTTCACGCCGACCAGCTCATCTCCAACGGCTACCTCGTCCCCTTGCAAGTGTTCGAGGGCGTATCGGGTGTCATGATCGGTTCACCTGATGCAGTTAAGCTCGTAGCGGAGCCACCAGGAAAATCTGCAGAGTCGTTGAGGAAGTCGTGCAGGAGATTATCAAGGCAGATTTTCCAGAAATATTTGAACTTTTTAAGGCCACTTTGTAGAAGGATTCAAAGGGTGGGAAATTATGGGAATAATACTAATGGTAAATTAGGAGGGAAGAAATTGTTGTTCCATGGTGGAAAATATACTAATACTACTACTACTACCACAAGGGAAGCTCATCATCAGTGTATTGATGAATGGAGAAGATCTTCTTGTGATTCTGAGACCTCAATTTATGATGCAGTTCTTCACTGCAAAAACTCCATAGGAAAATGA ATGGAAGCTTCTTCTCAACCTCTATCCATAGAAAGCTTCTCATATAGTTGGTTAGTGAACATGAGATCATCCTTTGAAATTAGTTGTGCCAATTCCTTTAGAACCTCTCTTGATGAAGCTTCCTTCATTGAAATGGATCCTACAATGCCACCTTCCAAGAGATTCTACTTCACTAATTCCTCTCGCCGTTCTAACGACTTCAAGTTCCCAGCTCCTCTCTCCCCGTCTCCCTCTCTCCCTCTCGTTCACGCCGACCAGCTCATCTCCAACGGCTACCTCGTCCCCTTGCAAGTGTTCGAGGGCGTATCGGGTGTCATGATCGGTTCACCTGATGCAGTTAAGCTCGTAGCGGAGCCACCAGGAAAATCTGCAGAGTCGTTGAGGAAGTCGTGCAGGAGATTATCAAGGCAGATTTTCCAGAAATATTTGAACTTTTTAAGGCCACTTTGTAGAAGGATTCAAAGGGTGGGAAATTATGGGAATAATACTAATGGTAAATTAGGAGGGAAGAAATTGTTGTTCCATGGTGGAAAATATACTAATACTACTACTACTACCACAAGGGAAGCTCATCATCAGTGTATTGATGAATGGAGAAGATCTTCTTGTGATTCTGAGACCTCAATTTATGATGCAGTTCTTCACTGCAAAAACTCCATAGGAAAATGA MEASSQPLSIESFSYSWLVNMRSSFEISCANSFRTSLDEASFIEMDPTMPPSKRFYFTNSSRRSNDFKFPAPLSPSPSLPLVHADQLISNGYLVPLQVFEGVSGVMIGSPDAVKLVAEPPGKSAESLRKSCRRLSRQIFQKYLNFLRPLCRRIQRVGNYGNNTNGKLGGKKLLFHGGKYTNTTTTTTREAHHQCIDEWRRSSCDSETSIYDAVLHCKNSIGK
BLAST of CsaV3_5G000930 vs. NCBI nr
Match: XP_011654638.1 (PREDICTED: probable membrane-associated kinase regulator 6 [Cucumis sativus] >KGN49908.1 hypothetical protein Csa_5G139850 [Cucumis sativus]) HSP 1 Score: 393.7 bits (1010), Expect = 4.3e-106 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_5G000930 vs. NCBI nr
Match: XP_008437554.1 (PREDICTED: probable membrane-associated kinase regulator 6 [Cucumis melo] >ADN33780.1 hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 359.8 bits (922), Expect = 6.9e-96 Identity = 193/223 (86.55%), Postives = 196/223 (87.89%), Query Frame = 0
BLAST of CsaV3_5G000930 vs. NCBI nr
Match: XP_022922345.1 (probable membrane-associated kinase regulator 6 [Cucurbita moschata]) HSP 1 Score: 260.8 bits (665), Expect = 4.3e-66 Identity = 155/224 (69.20%), Postives = 165/224 (73.66%), Query Frame = 0
BLAST of CsaV3_5G000930 vs. NCBI nr
Match: XP_023551260.1 (probable membrane-associated kinase regulator 6 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 260.8 bits (665), Expect = 4.3e-66 Identity = 155/224 (69.20%), Postives = 165/224 (73.66%), Query Frame = 0
BLAST of CsaV3_5G000930 vs. NCBI nr
Match: XP_022973062.1 (probable membrane-associated kinase regulator 6 [Cucurbita maxima]) HSP 1 Score: 253.4 bits (646), Expect = 6.9e-64 Identity = 151/224 (67.41%), Postives = 164/224 (73.21%), Query Frame = 0
BLAST of CsaV3_5G000930 vs. TAIR10
Match: AT5G52900.1 (unknown protein) HSP 1 Score: 104.8 bits (260), Expect = 7.2e-23 Identity = 84/237 (35.44%), Postives = 118/237 (49.79%), Query Frame = 0
BLAST of CsaV3_5G000930 vs. Swiss-Prot
Match: sp|Q84JK8|MAKR6_ARATH (Probable membrane-associated kinase regulator 6 OS=Arabidopsis thaliana OX=3702 GN=MAKR6 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21 Identity = 84/237 (35.44%), Postives = 118/237 (49.79%), Query Frame = 0
BLAST of CsaV3_5G000930 vs. TrEMBL
Match: tr|A0A0A0KJZ7|A0A0A0KJZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139850 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 2.8e-106 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_5G000930 vs. TrEMBL
Match: tr|A0A1S3AUX4|A0A1S3AUX4_CUCME (probable membrane-associated kinase regulator 6 OS=Cucumis melo OX=3656 GN=LOC103482933 PE=4 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 4.5e-96 Identity = 193/223 (86.55%), Postives = 196/223 (87.89%), Query Frame = 0
BLAST of CsaV3_5G000930 vs. TrEMBL
Match: tr|E5GBD9|E5GBD9_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 4.5e-96 Identity = 193/223 (86.55%), Postives = 196/223 (87.89%), Query Frame = 0
BLAST of CsaV3_5G000930 vs. TrEMBL
Match: tr|A0A2P5CB68|A0A2P5CB68_PARAD (Putative membrane-associated kinase regulator OS=Parasponia andersonii OX=3476 GN=PanWU01x14_168430 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 7.1e-41 Identity = 117/230 (50.87%), Postives = 138/230 (60.00%), Query Frame = 0
BLAST of CsaV3_5G000930 vs. TrEMBL
Match: tr|A0A2P5FGL6|A0A2P5FGL6_9ROSA (Putative membrane-associated kinase regulator OS=Trema orientalis OX=63057 GN=TorRG33x02_073160 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.7e-40 Identity = 118/230 (51.30%), Postives = 137/230 (59.57%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |