CsaV3_5G000880 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAGCTCAGAGTTGGCGTCATGCCTTTAGGAAGCTTCCTCCCTCCAATCTAAATTCCTTTTTCTGCCGCTATTTCATCTTTTTCAACCATTATCCTACGAGAGGACCCCACGTTTGCCACCATTTTCCTATCAAAATTTCACTATAAAGCTCATTTCTCGTATATTCATTTCCAAGTCATTCCTTTCAGAGATATACACAATCCAATCAATCCCCTTTCTTTTTCAATCCTTCTCCTAAATTCCAATCTGGTTCCATTGCCATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATCAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAAAATGGATATCGGTTGGGATAGAGTTTTTGTTTTCAAGTGTTGTTGGGTGTAAAATCTGTTTGCTAGAAATTAGTGTAGAAAGAAAGTAAAAGTATTATAGAGGGCGAATTGTGATGGAATTTTTTTGTTTAAATTATAGATTTTAATTTTTAACTATTATTTATATGTAAGAAAAAGTTAGAAAACCCTCTAACCTTCATGGAAACATTACTAGAATTTTTGTTTACCAATTCAATTAATGTGATGAATAATCTAAAATTTGATCATCCAAATATAA ATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATCAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAA ATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATCAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAA MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWWVVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGGECCDGFELSFHERMFMLDQFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN
BLAST of CsaV3_5G000880 vs. NCBI nr
Match: KGN49903.1 (hypothetical protein Csa_5G139810 [Cucumis sativus]) HSP 1 Score: 355.1 bits (910), Expect = 1.3e-94 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of CsaV3_5G000880 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia]) HSP 1 Score: 201.1 bits (510), Expect = 3.2e-48 Identity = 109/176 (61.93%), Postives = 129/176 (73.30%), Query Frame = 0
BLAST of CsaV3_5G000880 vs. NCBI nr
Match: XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia]) HSP 1 Score: 199.9 bits (507), Expect = 7.2e-48 Identity = 107/175 (61.14%), Postives = 127/175 (72.57%), Query Frame = 0
BLAST of CsaV3_5G000880 vs. NCBI nr
Match: XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia]) HSP 1 Score: 163.7 bits (413), Expect = 5.7e-37 Identity = 89/179 (49.72%), Postives = 119/179 (66.48%), Query Frame = 0
BLAST of CsaV3_5G000880 vs. NCBI nr
Match: KGN49902.1 (hypothetical protein Csa_5G139800 [Cucumis sativus]) HSP 1 Score: 152.1 bits (383), Expect = 1.7e-33 Identity = 91/180 (50.56%), Postives = 116/180 (64.44%), Query Frame = 0
BLAST of CsaV3_5G000880 vs. TrEMBL
Match: tr|A0A0A0KJZ3|A0A0A0KJZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 8.9e-95 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of CsaV3_5G000880 vs. TrEMBL
Match: tr|A0A0A0KND2|A0A0A0KND2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139800 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.1e-33 Identity = 91/180 (50.56%), Postives = 116/180 (64.44%), Query Frame = 0
BLAST of CsaV3_5G000880 vs. TrEMBL
Match: tr|E5GBE1|E5GBE1_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19 Identity = 70/181 (38.67%), Postives = 98/181 (54.14%), Query Frame = 0
BLAST of CsaV3_5G000880 vs. TrEMBL
Match: tr|A0A0A0KM15|A0A0A0KM15_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.9e-18 Identity = 71/183 (38.80%), Postives = 96/183 (52.46%), Query Frame = 0
BLAST of CsaV3_5G000880 vs. TrEMBL
Match: tr|A0A0A0KUT0|A0A0A0KUT0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.3e-15 Identity = 60/177 (33.90%), Postives = 91/177 (51.41%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |