CsaV3_4G037330 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G037330
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 26181471 .. 26181776 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTATTCACAGTTGCTTTTACTGTTTGAGGCAATCGAGATTTGGCTTCAAATTTCCCTGTTTCTTCCAAGAAAAGGAATTTCAACGTCTTTTTCCTCTGGGAGAGGCAAAAAGAGGAGTTTTGTAGAGTTTGAACTTTTGGGTGGGGGAATGGTGGGCCATTGTTTCTTTGCATTTATGTTAGTGGGCAATCCTAACACAAGACTCTGCATTTCTGCCTTCACTTTGCCGGCATTCAAAAGTTTCGGCCGGCCGTTCAGTTTCCGCCACTGCCCTTTATCATCTCCGTTTTTACGAAACTAA

mRNA sequence

ATGGATTATTCACAGTTGCTTTTACTGTTTGAGGCAATCGAGATTTGGCTTCAAATTTCCCTGTTTCTTCCAAGAAAAGGAATTTCAACGTCTTTTTCCTCTGGGAGAGGCAAAAAGAGGAGTTTTGTAGAGTTTGAACTTTTGGGTGGGGGAATGGTGGGCCATTGTTTCTTTGCATTTATGTTAGTGGGCAATCCTAACACAAGACTCTGCATTTCTGCCTTCACTTTGCCGGCATTCAAAAGTTTCGGCCGGCCGTTCAGTTTCCGCCACTGCCCTTTATCATCTCCGTTTTTACGAAACTAA

Coding sequence (CDS)

ATGGATTATTCACAGTTGCTTTTACTGTTTGAGGCAATCGAGATTTGGCTTCAAATTTCCCTGTTTCTTCCAAGAAAAGGAATTTCAACGTCTTTTTCCTCTGGGAGAGGCAAAAAGAGGAGTTTTGTAGAGTTTGAACTTTTGGGTGGGGGAATGGTGGGCCATTGTTTCTTTGCATTTATGTTAGTGGGCAATCCTAACACAAGACTCTGCATTTCTGCCTTCACTTTGCCGGCATTCAAAAGTTTCGGCCGGCCGTTCAGTTTCCGCCACTGCCCTTTATCATCTCCGTTTTTACGAAACTAA

Protein sequence

MDYSQLLLLFEAIEIWLQISLFLPRKGISTSFSSGRGKKRSFVEFELLGGGMVGHCFFAFMLVGNPNTRLCISAFTLPAFKSFGRPFSFRHCPLSSPFLRN
Homology
[Close]
BLAST of CsaV3_4G037330 vs. NCBI nr
Match: KGN55507.1 (hypothetical protein Csa_4G663660 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 8.9e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MDYSQLLLLFEAIEIWLQISLFLPRKGISTSFSSGRGKKRSFVEFELLGGGMVGHCFFAF 60
           MDYSQLLLLFEAIEIWLQISLFLPRKGISTSFSSGRGKKRSFVEFELLGGGMVGHCFFAF
Sbjct: 1   MDYSQLLLLFEAIEIWLQISLFLPRKGISTSFSSGRGKKRSFVEFELLGGGMVGHCFFAF 60

Query: 61  MLVGNPNTRLCISAFTLPAFKSFGRPFSFRHCPLSSPFLRN 102
           MLVGNPNTRLCISAFTLPAFKSFGRPFSFRHCPLSSPFLRN
Sbjct: 61  MLVGNPNTRLCISAFTLPAFKSFGRPFSFRHCPLSSPFLRN 101

[Close]
BLAST of CsaV3_4G037330 vs. TrEMBL
Match: tr|A0A0A0L4L8|A0A0A0L4L8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G663660 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.9e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MDYSQLLLLFEAIEIWLQISLFLPRKGISTSFSSGRGKKRSFVEFELLGGGMVGHCFFAF 60
           MDYSQLLLLFEAIEIWLQISLFLPRKGISTSFSSGRGKKRSFVEFELLGGGMVGHCFFAF
Sbjct: 1   MDYSQLLLLFEAIEIWLQISLFLPRKGISTSFSSGRGKKRSFVEFELLGGGMVGHCFFAF 60

Query: 61  MLVGNPNTRLCISAFTLPAFKSFGRPFSFRHCPLSSPFLRN 102
           MLVGNPNTRLCISAFTLPAFKSFGRPFSFRHCPLSSPFLRN
Sbjct: 61  MLVGNPNTRLCISAFTLPAFKSFGRPFSFRHCPLSSPFLRN 101

The following BLAST results are available for this feature:
BLAST of CsaV3_4G037330 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55507.18.9e-51100.00hypothetical protein Csa_4G663660 [Cucumis sativus][more]
BLAST of CsaV3_4G037330 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G037330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G037330 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L4L8|A0A0A0L4L8_CUCSA5.9e-51100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G663660 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G037330.1CsaV3_4G037330.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G037330Cucurbita moschata (Rifu)cmocucB0020
CsaV3_4G037330Cucurbita moschata (Rifu)cmocucB0540
CsaV3_4G037330Cucurbita pepo (Zucchini)cpecucB0310
CsaV3_4G037330Cucurbita pepo (Zucchini)cpecucB0709
CsaV3_4G037330Cucurbita pepo (Zucchini)cpecucB0974
CsaV3_4G037330Wild cucumber (PI 183967)cpicucB212
CsaV3_4G037330Bottle gourd (USVL1VR-Ls)cuclsiB305
CsaV3_4G037330Melon (DHL92) v3.5.1cucmeB316
CsaV3_4G037330Melon (DHL92) v3.6.1cucmedB308
CsaV3_4G037330Watermelon (Charleston Gray)cucwcgB289
CsaV3_4G037330Watermelon (97103) v1cucwmB368
CsaV3_4G037330Watermelon (97103) v2cucwmbB282
CsaV3_4G037330Wax gourdcucwgoB426
CsaV3_4G037330Cucumber (Chinese Long) v3cuccucB187
CsaV3_4G037330Silver-seed gourdcarcucB0122
CsaV3_4G037330Silver-seed gourdcarcucB0392
CsaV3_4G037330Cucumber (Gy14) v2cgybcucB171
CsaV3_4G037330Cucumber (Gy14) v1cgycucB415
CsaV3_4G037330Cucurbita maxima (Rimu)cmacucB0031
CsaV3_4G037330Cucurbita maxima (Rimu)cmacucB0554