CsaV3_4G036410 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTGAACACCGTAAATTTTTTCAATCATGTAAAAAGGTCATTCCAAACCGACCCTTTAAACGTTTATGTATATATTAACCGACACTTATGTTTGGTACTGCAGAGAATCTTCAGTGAATATAAACATCCATTTGCTCTCTCATATTTAGGGGTATCTCTCATGGTGATATATTTACCAGTGGCAGTTCTCAAAGATTTGGTGTGCAGTTTATTAAACCCTCATAGTTTACTTGATAATAATTATGATTCTATTATAAGCACTTCAATTGGAATTGATGGCCCATTGAGATTTAATGAAATACATTACAATTTGGATGAAAGCATGGGACATTGCCTTATAATTAATGATAAAGATTTGAGTACTACTGAAAGGGAAGAGGGACAACCTTTGATTCCTAATTTTGAATCATCACATCATAAAGTTAGTACATGGGAAATTATTAAATGCAGCCTTTATCTTACTCCCTTGTGGTTCACTACGGAGGTACATTTTCTCTTAAACTATTTTAGTTTATTTTGACTCTTGCATATATTTCTTTTTGTGGTACACGTTTCTTTCTTTGGTGCACCTTGAGGTGATGGATTTGAACTCGGGATATTTTGGTTTTTAGCCCATCTATATATTAGTTGAGTTAAATTCTTGTTAGCATTTAGTACATGTTTCTTACTTTTTTTTTAATGTAATTTAATATTATTCTCCTAAACAAATAAAAGAAAGAGGAATTTTCAATAATGACAAAATATTTACAAAATATAGCAAAATTTCAGATTCTATCAAAGATAGAAATTGATAAATGTTGATATGTTTCTATTAGCGACTTTGAAGTTTATCCATTATTGATAAAATTCAAAATTTTACTATATTTTGTAAATATTTTAGTTTATTTGAAAATGTCCCTAAAAGAAATGTGTAATGTGTATATGCTTGTTTTCCATACTATATATGATTCACACATTTCTTGAAAGAATGTTTGAACTATTTTTGGCCAAAATTTTAAAACCAAAAATAAGTTTTTGAAACACTACATTTTTTCTAAGACTTCATTTGGTATTTTTGTTTTTGGTTTTTCAAAATTTAGTCTATAAACACTAACTCTACCTCTAAGTTTGTTATCTATTTTCTAGGACCAATGTTTTCAAAAGTTAAAGCCAAATTTTGATAGCCGAAAATAATTTTTAAAAATTTGTTAAAATAGACTAAAACTATTTTAAGAAATTGATAAGAAATAGACTTATAATTTTCAAAAACAAAAAACGGTTAATAAATGGGCCTAAATCTTAGACCGAATAAATGTGGTTGTATGTGAATGTCTACTGAGGTTTTCATTTATCATTGATTGTTAATTTTAGGAACTCGTGTTGCTGCAATAATGTCGTTTGTTGAGACTTTTGCAGTACTTCTCAAACTCGGCCCTAGCAAATACGAGTGTTGCGACGGCAACGATCTTGAATTCGACATCAGGCCTTTTCGCCCTTCTGTTTGGAGCTCTTGTTGGACAAGAATCCATAACCATTTCCAAAGTGGTTGCTGTTTTCATTAGTATGGCTGGGGTCATCATGACAACCTTGGGAAAAACTTGGGCAACCAATGAGTTCCTAATCATTTCTGAGTAAGCTTTACTATTAATTACTATATAGTTTCAATTTTCTTCATTTCATATGTAAGATGAACGTTATCACATATTGGTGAGTCATATCTTTTTGGTAAGGTCAAGAGGTCTAAGCATCACAGGAGACATTTTCGGTCTTCTTTCGGCCGCAATCTATGGATTATTTACTGGTATGGCGTTCTAACTAGGGACTGTTTTGTTGGTGATTCAAATGCTTTACATGATAATTATTAAAATTCTATGATTGGTATATGTATATAGTGCTGCTAAAAAAATCAGCTGGATCAGAAGGAGACAAGATTGATGTACAAAAGTTTTTTGGATATGTTGGTCTCTTTACCGTATTGGGTCTCTGGTGGCTTGGTAAGTGGATCAGTAATATCTAGTTAATGATGATTTGTTCTTCTTCATTGAACAGATTTTTTAGGGTCAGACAGAAGTACTTGACCATGAAAATTTAAGCACTTCATTGACAAGTTATGAAAACGTATTTAGCTGAGTTTGTGTTCAACACATGTTGTTGAACTCAGTAGTCAGTACAGTAGATGTGTTATATACTAGTTGTACGAGGTCGAAATAGGACCAACAATCGGTAGAACAAATCAAGCACTTGTTACATACATTTGTTTCATTTTCTTTTTTCCTCGATGAAAGTAAAATAGATGTTTGAGTATATATAGCAATCCATAGAGTCTTGTATCTATTTGTATCCATGCTGCCTTTACAAAGTAAACTGTTCTTATCAGTAAAATCACTCCTTGCAGTTTGGCCTTTAACTGCTATGGGCATTGAACCTCCTCTCAAGTTTCCTCCCTCGACATCCTTAACCGAAATCGTGCTTTTGAATGGCTTCGTCGGGAGCGTTCTGTCGGATTACTTTTGGTATGTCGACAAAAATACTATATATGTTCAAGTTGACCACACACCCGGTTGGATAACAATTTCCTTTACAGTTTTTTCCCATGCAAATATCTAGAAAAATAATCTGAAAATAACAAGTCATTTCATTGATAAGAGTTACCTCTTCGAAAACTTATTGAGACTTTGTTCTGTTTGATTGAAAATTCAAAGAGAGGATTTGTTCATACTTTGGCAGGGCCCTCTCTGTGATTTGGACTTCTCCATTAGTTGCCACACTTGGCATGTCATTGACAATTCCCCTAGCTATGCTGGCTGACGTTATATTACACGGTCGTCGCTACTCTGCTCTCTACATCCTCGGTTGCATTCAGGTAATCGCTCATCAACTCAGTTAAAATTTTAGAACTCAAGAACAAAATGGTACAATGGATATCACGTATTTCGAACACGATATCGATCTATTTAGTTTATACAGATGTTTCGTATTCGAGTATTCAAATACTTAAGGGAGAAGTGTTCTTAGGCTCTTGGCTCTGTTTTCTTCTTTCCATTCAGGTGTTTGCTGGATTTTTAATAGTGAACTTTTCAGACAAGGTCTCTACTTAGGGGAGAACCAACTCAAAATCCTCGGAAGAAGAAGGTGGATGTGTTAAATGTAACTTTACAAATGTAAATATTGAACATCTTATGAATATAGGTATAGAAATGTTAAATATTTGAGAGTTAGAATATAATTATGTGTTGGATATGTATATTTGAGAGTTTAATGTCTCGTGTTTGATTATAGATTTGGTTGATGGGAAAATAATTTTAATTATTAGATTTAATTGGAATATAT ATGGTGATATATTTACCAGTGGCAGTTCTCAAAGATTTGGTGTGCAGTTTATTAAACCCTCATAGTTTACTTGATAATAATTATGATTCTATTATAAGCACTTCAATTGGAATTGATGGCCCATTGAGATTTAATGAAATACATTACAATTTGGATGAAAGCATGGGACATTGCCTTATAATTAATGATAAAGATTTGAGTACTACTGAAAGGGAAGAGGGACAACCTTTGATTCCTAATTTTGAATCATCACATCATAAAGTTAGTACATGGGAAATTATTAAATGCAGCCTTTATCTTACTCCCTTGTGGTTCACTACGGAGTACTTCTCAAACTCGGCCCTAGCAAATACGAGTGTTGCGACGGCAACGATCTTGAATTCGACATCAGGCCTTTTCGCCCTTCTGTTTGGAGCTCTTGTTGGACAAGAATCCATAACCATTTCCAAAGTGGTTGCTGTTTTCATTAGTATGGCTGGGGTCATCATGACAACCTTGGGAAAAACTTGGGCAACCAATGAGTTCCTAATCATTTCTGAGTCAAGAGGTCTAAGCATCACAGGAGACATTTTCGGTCTTCTTTCGGCCGCAATCTATGGATTATTTACTGTGCTGCTAAAAAAATCAGCTGGATCAGAAGGAGACAAGATTGATGTACAAAAGTTTTTTGGATATGTTGGTCTCTTTACCGTATTGGGTCTCTGGTGGCTTGTTTGGCCTTTAACTGCTATGGGCATTGAACCTCCTCTCAAGTTTCCTCCCTCGACATCCTTAACCGAAATCGTGCTTTTGAATGGCTTCGTCGGGAGCGTTCTGTCGGATTACTTTTGGGCCCTCTCTGTGATTTGGACTTCTCCATTAGTTGCCACACTTGGCATGTCATTGACAATTCCCCTAGCTATGCTGGCTGACGTTATATTACACGGTCGTCGCTACTCTGCTCTCTACATCCTCGGTTGCATTCAGGTGTTTGCTGGATTTTTAATAGTGAACTTTTCAGACAAGGTCTCTACTTAG ATGGTGATATATTTACCAGTGGCAGTTCTCAAAGATTTGGTGTGCAGTTTATTAAACCCTCATAGTTTACTTGATAATAATTATGATTCTATTATAAGCACTTCAATTGGAATTGATGGCCCATTGAGATTTAATGAAATACATTACAATTTGGATGAAAGCATGGGACATTGCCTTATAATTAATGATAAAGATTTGAGTACTACTGAAAGGGAAGAGGGACAACCTTTGATTCCTAATTTTGAATCATCACATCATAAAGTTAGTACATGGGAAATTATTAAATGCAGCCTTTATCTTACTCCCTTGTGGTTCACTACGGAGTACTTCTCAAACTCGGCCCTAGCAAATACGAGTGTTGCGACGGCAACGATCTTGAATTCGACATCAGGCCTTTTCGCCCTTCTGTTTGGAGCTCTTGTTGGACAAGAATCCATAACCATTTCCAAAGTGGTTGCTGTTTTCATTAGTATGGCTGGGGTCATCATGACAACCTTGGGAAAAACTTGGGCAACCAATGAGTTCCTAATCATTTCTGAGTCAAGAGGTCTAAGCATCACAGGAGACATTTTCGGTCTTCTTTCGGCCGCAATCTATGGATTATTTACTGTGCTGCTAAAAAAATCAGCTGGATCAGAAGGAGACAAGATTGATGTACAAAAGTTTTTTGGATATGTTGGTCTCTTTACCGTATTGGGTCTCTGGTGGCTTGTTTGGCCTTTAACTGCTATGGGCATTGAACCTCCTCTCAAGTTTCCTCCCTCGACATCCTTAACCGAAATCGTGCTTTTGAATGGCTTCGTCGGGAGCGTTCTGTCGGATTACTTTTGGGCCCTCTCTGTGATTTGGACTTCTCCATTAGTTGCCACACTTGGCATGTCATTGACAATTCCCCTAGCTATGCTGGCTGACGTTATATTACACGGTCGTCGCTACTCTGCTCTCTACATCCTCGGTTGCATTCAGGTGTTTGCTGGATTTTTAATAGTGAACTTTTCAGACAAGGTCTCTACTTAG MVIYLPVAVLKDLVCSLLNPHSLLDNNYDSIISTSIGIDGPLRFNEIHYNLDESMGHCLIINDKDLSTTEREEGQPLIPNFESSHHKVSTWEIIKCSLYLTPLWFTTEYFSNSALANTSVATATILNSTSGLFALLFGALVGQESITISKVVAVFISMAGVIMTTLGKTWATNEFLIISESRGLSITGDIFGLLSAAIYGLFTVLLKKSAGSEGDKIDVQKFFGYVGLFTVLGLWWLVWPLTAMGIEPPLKFPPSTSLTEIVLLNGFVGSVLSDYFWALSVIWTSPLVATLGMSLTIPLAMLADVILHGRRYSALYILGCIQVFAGFLIVNFSDKVST
BLAST of CsaV3_4G036410 vs. NCBI nr
Match: XP_004145580.1 (PREDICTED: uncharacterized transporter C405.03c-like [Cucumis sativus]) HSP 1 Score: 608.2 bits (1567), Expect = 1.7e-170 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. NCBI nr
Match: KGN55414.1 (hypothetical protein Csa_4G651810 [Cucumis sativus]) HSP 1 Score: 608.2 bits (1567), Expect = 1.7e-170 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. NCBI nr
Match: XP_008452823.1 (PREDICTED: uncharacterized transporter C405.03c-like [Cucumis melo]) HSP 1 Score: 581.3 bits (1497), Expect = 2.2e-162 Identity = 322/338 (95.27%), Postives = 329/338 (97.34%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. NCBI nr
Match: XP_022982168.1 (uncharacterized transporter C405.03c-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 483.0 bits (1242), Expect = 8.2e-133 Identity = 278/339 (82.01%), Postives = 304/339 (89.68%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. NCBI nr
Match: XP_022982173.1 (thiamine-repressible mitochondrial transport protein THI74-like isoform X4 [Cucurbita maxima]) HSP 1 Score: 483.0 bits (1242), Expect = 8.2e-133 Identity = 278/339 (82.01%), Postives = 304/339 (89.68%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. TAIR10
Match: AT4G32140.1 (EamA-like transporter family) HSP 1 Score: 323.6 bits (828), Expect = 1.5e-88 Identity = 176/345 (51.01%), Postives = 227/345 (65.80%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. TAIR10
Match: AT3G07080.1 (EamA-like transporter family) HSP 1 Score: 78.6 bits (192), Expect = 8.4e-15 Identity = 58/214 (27.10%), Postives = 108/214 (50.47%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. Swiss-Prot
Match: sp|Q03730|YMB8_YEAST (Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YML018C PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-27 Identity = 85/270 (31.48%), Postives = 135/270 (50.00%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. Swiss-Prot
Match: sp|Q4R794|S35F5_MACFA (Solute carrier family 35 member F5 OS=Macaca fascicularis OX=9541 GN=SLC35F5 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.0e-26 Identity = 76/207 (36.71%), Postives = 119/207 (57.49%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. Swiss-Prot
Match: sp|A6QL92|S35F5_BOVIN (Solute carrier family 35 member F5 OS=Bos taurus OX=9913 GN=SLC35F5 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.7e-26 Identity = 77/206 (37.38%), Postives = 119/206 (57.77%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. Swiss-Prot
Match: sp|Q5R6J3|S35F5_PONAB (Solute carrier family 35 member F5 OS=Pongo abelii OX=9601 GN=SLC35F5 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.7e-26 Identity = 76/207 (36.71%), Postives = 118/207 (57.00%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. Swiss-Prot
Match: sp|Q8R314|S35F5_MOUSE (Solute carrier family 35 member F5 OS=Mus musculus OX=10090 GN=Slc35f5 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 4.5e-26 Identity = 76/207 (36.71%), Postives = 117/207 (56.52%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. TrEMBL
Match: tr|A0A0A0L306|A0A0A0L306_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651810 PE=4 SV=1) HSP 1 Score: 608.2 bits (1567), Expect = 1.1e-170 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. TrEMBL
Match: tr|A0A1S3BUT3|A0A1S3BUT3_CUCME (uncharacterized transporter C405.03c-like OS=Cucumis melo OX=3656 GN=LOC103493733 PE=4 SV=1) HSP 1 Score: 581.3 bits (1497), Expect = 1.5e-162 Identity = 322/338 (95.27%), Postives = 329/338 (97.34%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. TrEMBL
Match: tr|A0A067FVC7|A0A067FVC7_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g015504mg PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 3.5e-108 Identity = 230/347 (66.28%), Postives = 273/347 (78.67%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. TrEMBL
Match: tr|A0A2H5NW71|A0A2H5NW71_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_081670 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 1.7e-107 Identity = 229/347 (65.99%), Postives = 272/347 (78.39%), Query Frame = 0
BLAST of CsaV3_4G036410 vs. TrEMBL
Match: tr|V4WAW2|V4WAW2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008500mg PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 1.1e-106 Identity = 229/347 (65.99%), Postives = 272/347 (78.39%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |