CsaV3_4G035780 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATTACAGGTACCATGGAAATGGGTTCAGTGGAGGGAACAATACAGAGTTCAACTATGCCACAAACTCTCGAAATTCTTACGAATTGAGAACATATTCTGCCACTTACGCACAAACCCAGATGGAAATCAGGGATTCCCAATTCAAGAAAGGGAAATCTCATTCTGGGTCTGTCTCAAAATCTTGGAGTTTCTCGGACCCTGAATTTCAGAGGAAGAAGAGAGTTGCTAACTACAAGATGTATTCTGTTGAAGGCAAAATGAAGGGTTCTTTCAGAAACAGTTTTAGATGGCTGAAACGTAAATGCGAACATGTCGTTTATGGCTGGTGGTGA ATGGAAGATTACAGGTACCATGGAAATGGGTTCAGTGGAGGGAACAATACAGAGTTCAACTATGCCACAAACTCTCGAAATTCTTACGAATTGAGAACATATTCTGCCACTTACGCACAAACCCAGATGGAAATCAGGGATTCCCAATTCAAGAAAGGGAAATCTCATTCTGGGTCTGTCTCAAAATCTTGGAGTTTCTCGGACCCTGAATTTCAGAGGAAGAAGAGAGTTGCTAACTACAAGATGTATTCTGTTGAAGGCAAAATGAAGGGTTCTTTCAGAAACAGTTTTAGATGGCTGAAACGTAAATGCGAACATGTCGTTTATGGCTGGTGGTGA ATGGAAGATTACAGGTACCATGGAAATGGGTTCAGTGGAGGGAACAATACAGAGTTCAACTATGCCACAAACTCTCGAAATTCTTACGAATTGAGAACATATTCTGCCACTTACGCACAAACCCAGATGGAAATCAGGGATTCCCAATTCAAGAAAGGGAAATCTCATTCTGGGTCTGTCTCAAAATCTTGGAGTTTCTCGGACCCTGAATTTCAGAGGAAGAAGAGAGTTGCTAACTACAAGATGTATTCTGTTGAAGGCAAAATGAAGGGTTCTTTCAGAAACAGTTTTAGATGGCTGAAACGTAAATGCGAACATGTCGTTTATGGCTGGTGGTGA MEDYRYHGNGFSGGNNTEFNYATNSRNSYELRTYSATYAQTQMEIRDSQFKKGKSHSGSVSKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEHVVYGWW
BLAST of CsaV3_4G035780 vs. NCBI nr
Match: XP_011654415.1 (PREDICTED: uncharacterized protein LOC101210762 [Cucumis sativus] >KGN55347.1 hypothetical protein Csa_4G646210 [Cucumis sativus]) HSP 1 Score: 233.0 bits (593), Expect = 4.9e-58 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. NCBI nr
Match: XP_022136638.1 (uncharacterized protein LOC111008293 [Momordica charantia] >XP_022158308.1 uncharacterized protein LOC111024820 [Momordica charantia]) HSP 1 Score: 193.4 bits (490), Expect = 4.3e-46 Identity = 94/112 (83.93%), Postives = 102/112 (91.07%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. NCBI nr
Match: XP_022975771.1 (uncharacterized protein LOC111476369 [Cucurbita maxima]) HSP 1 Score: 164.1 bits (414), Expect = 2.8e-37 Identity = 83/112 (74.11%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. NCBI nr
Match: XP_015884421.1 (uncharacterized protein LOC107420071 [Ziziphus jujuba] >XP_015902649.1 uncharacterized protein LOC107435530 [Ziziphus jujuba]) HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27 Identity = 74/119 (62.18%), Postives = 86/119 (72.27%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. NCBI nr
Match: XP_012452705.1 (PREDICTED: uncharacterized protein LOC105774692 [Gossypium raimondii] >XP_016754850.1 PREDICTED: uncharacterized protein LOC107962828 [Gossypium hirsutum] >XP_016699631.1 PREDICTED: uncharacterized protein LOC107915042 [Gossypium hirsutum] >XP_016699632.1 PREDICTED: uncharacterized protein LOC107915043 [Gossypium hirsutum] >XP_017636442.1 PREDICTED: uncharacterized protein LOC108478494 [Gossypium arboreum] >KJB65518.1 hypothetical protein B456_010G098600 [Gossypium raimondii] >PPS05404.1 hypothetical protein GOBAR_AA15255 [Gossypium barbadense] >PPS05405.1 hypothetical protein GOBAR_AA15256 [Gossypium barbadense] >PPS05406.1 hypothetical protein GOBAR_AA15257 [Gossypium barbadense]) HSP 1 Score: 123.2 bits (308), Expect = 5.5e-25 Identity = 71/116 (61.21%), Postives = 81/116 (69.83%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. TAIR10
Match: AT5G11970.1 (Protein of unknown function (DUF3511)) HSP 1 Score: 97.8 bits (242), Expect = 4.5e-21 Identity = 56/112 (50.00%), Postives = 68/112 (60.71%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. TAIR10
Match: AT2G19460.1 (Protein of unknown function (DUF3511)) HSP 1 Score: 79.3 bits (194), Expect = 1.6e-15 Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. TAIR10
Match: AT3G13910.1 (Protein of unknown function (DUF3511)) HSP 1 Score: 68.6 bits (166), Expect = 2.9e-12 Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. TAIR10
Match: AT1G72720.1 (Protein of unknown function (DUF3511)) HSP 1 Score: 65.1 bits (157), Expect = 3.2e-11 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. TAIR10
Match: AT2G47480.1 (Protein of unknown function (DUF3511)) HSP 1 Score: 63.2 bits (152), Expect = 1.2e-10 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. TrEMBL
Match: tr|A0A0A0L414|A0A0A0L414_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646210 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.2e-58 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. TrEMBL
Match: tr|A0A1U8PUN1|A0A1U8PUN1_GOSHI (uncharacterized protein LOC107915042 OS=Gossypium hirsutum OX=3635 GN=LOC107962828 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.6e-25 Identity = 71/116 (61.21%), Postives = 81/116 (69.83%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. TrEMBL
Match: tr|A0A2P5XPZ1|A0A2P5XPZ1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA15255 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.6e-25 Identity = 71/116 (61.21%), Postives = 81/116 (69.83%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. TrEMBL
Match: tr|A0A0D2SQF9|A0A0D2SQF9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G098600 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.6e-25 Identity = 71/116 (61.21%), Postives = 81/116 (69.83%), Query Frame = 0
BLAST of CsaV3_4G035780 vs. TrEMBL
Match: tr|B9RQS2|B9RQS2_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0706040 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 5.2e-24 Identity = 72/130 (55.38%), Postives = 85/130 (65.38%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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