CsaV3_4G035480 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G035480
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 25017247 .. 25017585 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTTCTCCAGCTATTTCCGAGTTCAGATAAACTCATAATCGCGAGAGCTTGTGAGGGATTTAATTATGCAAGATCAAGGTCAGAAAAAACTTTTCATTACAAGAAGGAAAATGAGGAGGTTTTTTCTTTTCGATTTGATATTAGATCTAAACCCAGAAATCCAATGATAGGTAATGCATTCACAAAATCAAAAAAGATAAGAGCATCTGGGAAAATTCGTCTGCTGATTGCGAATCTGAACAACAAATCAAACTCGCATCTTTCCATCATAGAAAGAAATCCAATTGAGAGGAAAATCCTGTCCGTGAACATTTTTGGAGATGGAAATTTCTGA

mRNA sequence

ATGAACCTTCTCCAGCTATTTCCGAGTTCAGATAAACTCATAATCGCGAGAGCTTGTGAGGGATTTAATTATGCAAGATCAAGGTCAGAAAAAACTTTTCATTACAAGAAGGAAAATGAGGAGGTTTTTTCTTTTCGATTTGATATTAGATCTAAACCCAGAAATCCAATGATAGGTAATGCATTCACAAAATCAAAAAAGATAAGAGCATCTGGGAAAATTCGTCTGCTGATTGCGAATCTGAACAACAAATCAAACTCGCATCTTTCCATCATAGAAAGAAATCCAATTGAGAGGAAAATCCTGTCCGTGAACATTTTTGGAGATGGAAATTTCTGA

Coding sequence (CDS)

ATGAACCTTCTCCAGCTATTTCCGAGTTCAGATAAACTCATAATCGCGAGAGCTTGTGAGGGATTTAATTATGCAAGATCAAGGTCAGAAAAAACTTTTCATTACAAGAAGGAAAATGAGGAGGTTTTTTCTTTTCGATTTGATATTAGATCTAAACCCAGAAATCCAATGATAGGTAATGCATTCACAAAATCAAAAAAGATAAGAGCATCTGGGAAAATTCGTCTGCTGATTGCGAATCTGAACAACAAATCAAACTCGCATCTTTCCATCATAGAAAGAAATCCAATTGAGAGGAAAATCCTGTCCGTGAACATTTTTGGAGATGGAAATTTCTGA

Protein sequence

MNLLQLFPSSDKLIIARACEGFNYARSRSEKTFHYKKENEEVFSFRFDIRSKPRNPMIGNAFTKSKKIRASGKIRLLIANLNNKSNSHLSIIERNPIERKILSVNIFGDGNF
Homology
[Close]
BLAST of CsaV3_4G035480 vs. NCBI nr
Match: KGN55317.1 (hypothetical protein Csa_4G645905 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 8.7e-55
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MNLLQLFPSSDKLIIARACEGFNYARSRSEKTFHYKKENEEVFSFRFDIRSKPRNPMIGN 60
           MNLLQLFPSSDKLIIARACEGFNYARSRSEKTFHYKKENEEVFSFRFDIRSKPRNPMIGN
Sbjct: 1   MNLLQLFPSSDKLIIARACEGFNYARSRSEKTFHYKKENEEVFSFRFDIRSKPRNPMIGN 60

Query: 61  AFTKSKKIRASGKIRLLIANLNNKSNSHLSIIERNPIERKILSVNIFGDGNF 113
           AFTKSKKIRASGKIRLLIANLNNKSNSHLSIIERNPIERKILSVNIFGDGNF
Sbjct: 61  AFTKSKKIRASGKIRLLIANLNNKSNSHLSIIERNPIERKILSVNIFGDGNF 112

[Close]
BLAST of CsaV3_4G035480 vs. TrEMBL
Match: tr|A0A0A0L3Y3|A0A0A0L3Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645905 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.7e-55
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MNLLQLFPSSDKLIIARACEGFNYARSRSEKTFHYKKENEEVFSFRFDIRSKPRNPMIGN 60
           MNLLQLFPSSDKLIIARACEGFNYARSRSEKTFHYKKENEEVFSFRFDIRSKPRNPMIGN
Sbjct: 1   MNLLQLFPSSDKLIIARACEGFNYARSRSEKTFHYKKENEEVFSFRFDIRSKPRNPMIGN 60

Query: 61  AFTKSKKIRASGKIRLLIANLNNKSNSHLSIIERNPIERKILSVNIFGDGNF 113
           AFTKSKKIRASGKIRLLIANLNNKSNSHLSIIERNPIERKILSVNIFGDGNF
Sbjct: 61  AFTKSKKIRASGKIRLLIANLNNKSNSHLSIIERNPIERKILSVNIFGDGNF 112

The following BLAST results are available for this feature:
BLAST of CsaV3_4G035480 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55317.18.7e-55100.00hypothetical protein Csa_4G645905 [Cucumis sativus][more]
BLAST of CsaV3_4G035480 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G035480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G035480 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L3Y3|A0A0A0L3Y3_CUCSA5.7e-55100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645905 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G035480.1CsaV3_4G035480.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G035480Cucumber (Chinese Long) v3cuccucB027
CsaV3_4G035480Cucumber (Chinese Long) v3cuccucB081
CsaV3_4G035480Cucumber (Chinese Long) v3cuccucB190
CsaV3_4G035480Silver-seed gourdcarcucB0111
CsaV3_4G035480Silver-seed gourdcarcucB0211
CsaV3_4G035480Silver-seed gourdcarcucB0352
CsaV3_4G035480Silver-seed gourdcarcucB0810
CsaV3_4G035480Cucumber (Gy14) v2cgybcucB031
CsaV3_4G035480Cucumber (Gy14) v2cgybcucB081
CsaV3_4G035480Cucumber (Gy14) v2cgybcucB171
CsaV3_4G035480Cucumber (Gy14) v2cgybcucB341
CsaV3_4G035480Cucumber (Gy14) v1cgycucB536
CsaV3_4G035480Cucumber (Gy14) v1cgycucB549
CsaV3_4G035480Cucumber (Gy14) v1cgycucB597
CsaV3_4G035480Cucurbita maxima (Rimu)cmacucB0027
CsaV3_4G035480Cucurbita maxima (Rimu)cmacucB0087
CsaV3_4G035480Cucurbita maxima (Rimu)cmacucB0151
CsaV3_4G035480Cucurbita maxima (Rimu)cmacucB0565
CsaV3_4G035480Cucurbita maxima (Rimu)cmacucB0945
CsaV3_4G035480Cucurbita moschata (Rifu)cmocucB0015
CsaV3_4G035480Cucurbita moschata (Rifu)cmocucB0076
CsaV3_4G035480Cucurbita moschata (Rifu)cmocucB0137
CsaV3_4G035480Cucurbita moschata (Rifu)cmocucB0541
CsaV3_4G035480Cucurbita moschata (Rifu)cmocucB0933
CsaV3_4G035480Cucurbita pepo (Zucchini)cpecucB0127
CsaV3_4G035480Cucurbita pepo (Zucchini)cpecucB0459
CsaV3_4G035480Cucurbita pepo (Zucchini)cpecucB0701
CsaV3_4G035480Cucurbita pepo (Zucchini)cpecucB0848
CsaV3_4G035480Cucurbita pepo (Zucchini)cpecucB0969
CsaV3_4G035480Wild cucumber (PI 183967)cpicucB036
CsaV3_4G035480Wild cucumber (PI 183967)cpicucB103
CsaV3_4G035480Wild cucumber (PI 183967)cpicucB212
CsaV3_4G035480Wild cucumber (PI 183967)cpicucB407
CsaV3_4G035480Bottle gourd (USVL1VR-Ls)cuclsiB319
CsaV3_4G035480Bottle gourd (USVL1VR-Ls)cuclsiB312
CsaV3_4G035480Bottle gourd (USVL1VR-Ls)cuclsiB336
CsaV3_4G035480Melon (DHL92) v3.5.1cucmeB280
CsaV3_4G035480Melon (DHL92) v3.5.1cucmeB283
CsaV3_4G035480Melon (DHL92) v3.5.1cucmeB287
CsaV3_4G035480Melon (DHL92) v3.5.1cucmeB316
CsaV3_4G035480Melon (DHL92) v3.6.1cucmedB273
CsaV3_4G035480Melon (DHL92) v3.6.1cucmedB276
CsaV3_4G035480Melon (DHL92) v3.6.1cucmedB280
CsaV3_4G035480Melon (DHL92) v3.6.1cucmedB308
CsaV3_4G035480Watermelon (Charleston Gray)cucwcgB276
CsaV3_4G035480Watermelon (Charleston Gray)cucwcgB327
CsaV3_4G035480Watermelon (Charleston Gray)cucwcgB309
CsaV3_4G035480Watermelon (Charleston Gray)cucwcgB350
CsaV3_4G035480Watermelon (97103) v1cucwmB296
CsaV3_4G035480Watermelon (97103) v1cucwmB310
CsaV3_4G035480Watermelon (97103) v1cucwmB314
CsaV3_4G035480Watermelon (97103) v1cucwmB334
CsaV3_4G035480Watermelon (97103) v2cucwmbB315
CsaV3_4G035480Watermelon (97103) v2cucwmbB336
CsaV3_4G035480Watermelon (97103) v2cucwmbB341
CsaV3_4G035480Wax gourdcucwgoB390
CsaV3_4G035480Wax gourdcucwgoB426
CsaV3_4G035480Wax gourdcucwgoB428
CsaV3_4G035480Wax gourdcucwgoB437