CsaV3_4G034560 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCCCCTTCTTCATCGCCTCAAAAACTCCCTCTCCACAGCTCTCTTTCATTTCTACCCACTTTCCGGCCGCCTTGCTACCGCTACCAATAATGGGGTTTATGTTGACTGCGTTAACAGCCCAGGAGCCAAGTTCATCCATGCTGCCCTTGACATTACAGTCTCCGACATTCTCTCCCCGCTTCAACCATTCATCCAATCTCTCTTTGACCTCAACAAAGCCGTCAACTACGATGGCCACACCTTACCTTTGCTATCCATTCAG ATGGTTCCCCTTCTTCATCGCCTCAAAAACTCCCTCTCCACAGCTCTCTTTCATTTCTACCCACTTTCCGGCCGCCTTGCTACCGCTACCAATAATGGGGTTTATGTTGACTGCGTTAACAGCCCAGGAGCCAAGTTCATCCATGCTGCCCTTGACATTACAGTCTCCGACATTCTCTCCCCGCTTCAACCATTCATCCAATCTCTCTTTGACCTCAACAAAGCCGTCAACTACGATGGCCACACCTTACCTTTGCTATCCATTCAG ATGGTTCCCCTTCTTCATCGCCTCAAAAACTCCCTCTCCACAGCTCTCTTTCATTTCTACCCACTTTCCGGCCGCCTTGCTACCGCTACCAATAATGGGGTTTATGTTGACTGCGTTAACAGCCCAGGAGCCAAGTTCATCCATGCTGCCCTTGACATTACAGTCTCCGACATTCTCTCCCCGCTTCAACCATTCATCCAATCTCTCTTTGACCTCAACAAAGCCGTCAACTACGATGGCCACACCTTACCTTTGCTATCCATTCAG MVPLLHRLKNSLSTALFHFYPLSGRLATATNNGVYVDCVNSPGAKFIHAALDITVSDILSPLQPFIQSLFDLNKAVNYDGHTLPLLSIQ
BLAST of CsaV3_4G034560 vs. NCBI nr
Match: KGN55216.1 (hypothetical protein Csa_4G641505 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 1.3e-42 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. NCBI nr
Match: KGN55214.1 (hypothetical protein Csa_4G641000 [Cucumis sativus]) HSP 1 Score: 166.8 bits (421), Expect = 3.4e-38 Identity = 85/92 (92.39%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. NCBI nr
Match: XP_011654121.1 (PREDICTED: uncharacterized acetyltransferase At3g50280-like isoform X1 [Cucumis sativus] >XP_011654122.1 PREDICTED: uncharacterized acetyltransferase At3g50280-like isoform X2 [Cucumis sativus]) HSP 1 Score: 166.8 bits (421), Expect = 3.4e-38 Identity = 85/92 (92.39%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. NCBI nr
Match: XP_011654123.1 (PREDICTED: uncharacterized acetyltransferase At3g50280-like isoform X3 [Cucumis sativus]) HSP 1 Score: 166.8 bits (421), Expect = 3.4e-38 Identity = 85/92 (92.39%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. NCBI nr
Match: XP_011654124.1 (PREDICTED: uncharacterized acetyltransferase At3g50280-like isoform X4 [Cucumis sativus]) HSP 1 Score: 166.8 bits (421), Expect = 3.4e-38 Identity = 85/92 (92.39%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. TAIR10
Match: AT5G07870.1 (HXXXD-type acyl-transferase family protein) HSP 1 Score: 97.1 bits (240), Expect = 6.0e-21 Identity = 54/96 (56.25%), Postives = 72/96 (75.00%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. TAIR10
Match: AT5G42830.1 (HXXXD-type acyl-transferase family protein) HSP 1 Score: 90.5 bits (223), Expect = 5.6e-19 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. TAIR10
Match: AT5G07850.1 (HXXXD-type acyl-transferase family protein) HSP 1 Score: 84.3 bits (207), Expect = 4.0e-17 Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. TAIR10
Match: AT5G07860.1 (HXXXD-type acyl-transferase family protein) HSP 1 Score: 83.6 bits (205), Expect = 6.9e-17 Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. TAIR10
Match: AT2G39980.1 (HXXXD-type acyl-transferase family protein) HSP 1 Score: 67.8 bits (164), Expect = 3.9e-12 Identity = 36/89 (40.45%), Postives = 59/89 (66.29%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. Swiss-Prot
Match: sp|Q9SND9|Y3028_ARATH (Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana OX=3702 GN=At3g50280 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 9.5e-08 Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. Swiss-Prot
Match: sp|Q9FH97|EPS1_ARATH (Protein ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 OS=Arabidopsis thaliana OX=3702 GN=EPS1 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 4.4e-05 Identity = 34/91 (37.36%), Postives = 48/91 (52.75%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. Swiss-Prot
Match: sp|K4D9Y4|ASAT3_SOLLC (Acylsugar acyltransferase 3 OS=Solanum lycopersicum OX=4081 GN=ASAT3 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 4.9e-04 Identity = 23/53 (43.40%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. TrEMBL
Match: tr|A0A0A0L4X8|A0A0A0L4X8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641505 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 8.8e-43 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. TrEMBL
Match: tr|A0A0A0L2F0|A0A0A0L2F0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641000 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.2e-38 Identity = 85/92 (92.39%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. TrEMBL
Match: tr|A0A1S3BU45|A0A1S3BU45_CUCME (uncharacterized acetyltransferase At3g50280-like OS=Cucumis melo OX=3656 GN=LOC103493561 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 5.5e-37 Identity = 83/92 (90.22%), Postives = 84/92 (91.30%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. TrEMBL
Match: tr|A0A0A0L3M3|A0A0A0L3M3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G640980 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.0e-31 Identity = 73/91 (80.22%), Postives = 78/91 (85.71%), Query Frame = 0
BLAST of CsaV3_4G034560 vs. TrEMBL
Match: tr|A0A1S3BTK1|A0A1S3BTK1_CUCME (uncharacterized acetyltransferase At3g50280-like OS=Cucumis melo OX=3656 GN=LOC103493559 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.9e-30 Identity = 72/92 (78.26%), Postives = 77/92 (83.70%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |