CsaV3_4G033390 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G033390
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	pectinesterase inhibitor-like
Location	chr4 : 23643302 .. 23644158 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAACAAAAGCTTAACCTCATATTCCCACCAAAATAGCATTCCATACACAAATAATAACATTAATATAAAGAAAAGCAAATTCAAAAGGAAAATCAAACGCTTCACAAATTTCATACATAAATACTTACAATTCAACATCAATTCTTCATCAAATTCAAATTGCTCAAACATGAATCTCCTTAACTCCACTCTTCTAATTTCCCTCCTCTTTGCTCTCTTCTCTCCGGCGAAACCCGACGCCGCCTACATCCAAAACCTCTGCGGCAAAACAGAGCAACCGAAGATTTGTTCCGACTGCCTCAATTCCGGCCAGGGAAGTCAGAGCGCCATCGGCCGTGGACTGGCACTCATCGCCGTCGAATGTGCGGAGAGAAATACCAAATTAATGGCGCAGAGGGTTGGAAACCTTGTTCGTTCGACGCCGGAGTCAACATTGAAGACGCTTTTGAATGAATGTTGGATGTCGACGGGGTATGCCGCGGGTAATTTTCCGGGAATTGCAAGATCCGTGGCGGCGGGAGACTATGGGGGCGGGAAGAGCGTTTTGGAGATTACTATTAGGAATGTGAATATGTGCATGGATAATTTCAAGAAAAATCCTAGCATTCTGGTGCCGTCGGAGGTTTTGGCGGGGACGGTGGCGGTCACTCAAGATTGCCGGATTGTTACTCAGATTTTGAATAATATTTAAGAACCCTTAATTGACCCTCACCCCATTGATACAAAAGCAAACCTCATTTGCTTTCTTAATTGTTGTTTTCTAATTTCCTATTCAGTTTTCAAAAACCATTTTCGTTTATTACATATAAATAAAGTAATATCAAAATTTATTGTCACGTGACTGTTTTAAATTAGG

mRNA sequence

ATGAATCTCCTTAACTCCACTCTTCTAATTTCCCTCCTCTTTGCTCTCTTCTCTCCGGCGAAACCCGACGCCGCCTACATCCAAAACCTCTGCGGCAAAACAGAGCAACCGAAGATTTGTTCCGACTGCCTCAATTCCGGCCAGGGAAGTCAGAGCGCCATCGGCCGTGGACTGGCACTCATCGCCGTCGAATGTGCGGAGAGAAATACCAAATTAATGGCGCAGAGGGTTGGAAACCTTGTTCGTTCGACGCCGGAGTCAACATTGAAGACGCTTTTGAATGAATGTTGGATGTCGACGGGGTATGCCGCGGGTAATTTTCCGGGAATTGCAAGATCCGTGGCGGCGGGAGACTATGGGGGCGGGAAGAGCGTTTTGGAGATTACTATTAGGAATGTGAATATGTGCATGGATAATTTCAAGAAAAATCCTAGCATTCTGGTGCCGTCGGAGGTTTTGGCGGGGACGGTGGCGGTCACTCAAGATTGCCGGATTGTTACTCAGATTTTGAATAATATTTAA

Coding sequence (CDS)

ATGAATCTCCTTAACTCCACTCTTCTAATTTCCCTCCTCTTTGCTCTCTTCTCTCCGGCGAAACCCGACGCCGCCTACATCCAAAACCTCTGCGGCAAAACAGAGCAACCGAAGATTTGTTCCGACTGCCTCAATTCCGGCCAGGGAAGTCAGAGCGCCATCGGCCGTGGACTGGCACTCATCGCCGTCGAATGTGCGGAGAGAAATACCAAATTAATGGCGCAGAGGGTTGGAAACCTTGTTCGTTCGACGCCGGAGTCAACATTGAAGACGCTTTTGAATGAATGTTGGATGTCGACGGGGTATGCCGCGGGTAATTTTCCGGGAATTGCAAGATCCGTGGCGGCGGGAGACTATGGGGGCGGGAAGAGCGTTTTGGAGATTACTATTAGGAATGTGAATATGTGCATGGATAATTTCAAGAAAAATCCTAGCATTCTGGTGCCGTCGGAGGTTTTGGCGGGGACGGTGGCGGTCACTCAAGATTGCCGGATTGTTACTCAGATTTTGAATAATATTTAA

Protein sequence

MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLALIAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYGGGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI

Homology

[Close]

BLAST of CsaV3_4G033390 vs. NCBI nr
Match: XP_011654411.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis sativus] >KGN55098.1 hypothetical protein Csa_4G628950 [Cucumis sativus])

HSP 1 Score: 342.0 bits (876), Expect = 1.2e-90
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
           MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL
Sbjct: 1   MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60

Query: 61  IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
           IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG
Sbjct: 61  IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120

Query: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 174
           GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI
Sbjct: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173

[Close]

BLAST of CsaV3_4G033390 vs. NCBI nr
Match: XP_008463801.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 311.6 bits (797), Expect = 1.7e-81
Identity = 159/173 (91.91%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
           MNLLNS LLISLLFALFSPAKPDAAYI NLC KTEQPKICSDCLNSG+GSQSA GRGLAL
Sbjct: 1   MNLLNSILLISLLFALFSPAKPDAAYIGNLCSKTEQPKICSDCLNSGRGSQSASGRGLAL 60

Query: 61  IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
           IAV CAERNTKLMAQRVGNLVRSTPESTLK LLNECWMSTGYAAGNFPGIARSVAAGDY 
Sbjct: 61  IAVGCAERNTKLMAQRVGNLVRSTPESTLKMLLNECWMSTGYAAGNFPGIARSVAAGDYA 120

Query: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 174
            GK+VLEITIRNVNMC+ NFKKNP+I VPSEVLAGTVAVTQDCRIVTQILNNI
Sbjct: 121 SGKNVLEITIRNVNMCLVNFKKNPNIPVPSEVLAGTVAVTQDCRIVTQILNNI 173

[Close]

BLAST of CsaV3_4G033390 vs. NCBI nr
Match: XP_022940751.1 (uncharacterized protein LOC111446254 [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 1.4e-56
Identity = 117/175 (66.86%), Postives = 136/175 (77.71%), Query Frame = 0


Query: 1   MNLLNSTLLISL--LFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGL 60
           MN  NS L + L  LFALFSPAKPDAA I+NLCG+TEQP ICS CLNS   S++A GRGL
Sbjct: 1   MNPFNSMLPLFLLALFALFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGL 60

Query: 61  ALIAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGD 120
           A+IAV CAERNT+ MAQR+G++ R TP S +KTLLN+CW STGYAAGNFPGI  +V  GD
Sbjct: 61  AVIAVGCAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVQGGD 120

Query: 121 YGGGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 174
           Y   ++ +EI+IRNVN C+  F KNPS+ VPSEVLAGTVA  Q CRIV  ILNNI
Sbjct: 121 YARARNGVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175

[Close]

BLAST of CsaV3_4G033390 vs. NCBI nr
Match: XP_023536163.1 (uncharacterized protein LOC111797408 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.5 bits (576), Expect = 7.1e-56
Identity = 113/173 (65.32%), Postives = 135/173 (78.03%), Query Frame = 0


Query: 1   MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
           MNL NS     +LFALFS  KPDAA I ++CGKTEQP ICSDC  S  GSQ+A  RGLA+
Sbjct: 1   MNLSNSMFQFLVLFALFSLVKPDAALIGSVCGKTEQPVICSDCFKSSSGSQTADVRGLAV 60

Query: 61  IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
           IA+ CAERNT+LMAQ++G L+RSTP+S LKT+LN CW+STGY AG+FPGI R+VAAGDY 
Sbjct: 61  IAIGCAERNTRLMAQKLGELLRSTPDSALKTILNGCWLSTGYTAGDFPGIERAVAAGDYT 120

Query: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 174
            G++ LEI IRNVN C++ F KNP + VPSEVL GTVA  Q  RIV+ ILN+I
Sbjct: 121 TGRNTLEIAIRNVNSCLEEFNKNPRVPVPSEVLTGTVAAIQGRRIVSDILNSI 173

[Close]

BLAST of CsaV3_4G033390 vs. NCBI nr
Match: XP_022981703.1 (uncharacterized protein LOC111480766 [Cucurbita maxima])

HSP 1 Score: 225.7 bits (574), Expect = 1.2e-55
Identity = 116/175 (66.29%), Postives = 135/175 (77.14%), Query Frame = 0


Query: 1   MNLLNSTLLISLL--FALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGL 60
           MN  NS L + LL  FA FSPAKPDAA I+NLCG+TEQP ICS CLNS   S++A GRGL
Sbjct: 1   MNPFNSMLPLFLLSVFAPFSPAKPDAALIRNLCGRTEQPVICSACLNSDSASRTANGRGL 60

Query: 61  ALIAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGD 120
           A+IAV CAERNT+ MAQR+G++ R TP S +KTLLN+CW STGYAAGNFPGI  +V  GD
Sbjct: 61  AVIAVGCAERNTRAMAQRIGDISRRTPNSPVKTLLNDCWFSTGYAAGNFPGIRSAVEEGD 120

Query: 121 YGGGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 174
           Y   ++ +EI+IRNVN C+  F KNPS+ VPSEVLAGTVA  Q CRIV  ILNNI
Sbjct: 121 YARARNGVEISIRNVNSCLAGFDKNPSVPVPSEVLAGTVAAVQSCRIVLGILNNI 175

[Close]

BLAST of CsaV3_4G033390 vs. TrEMBL
Match: tr|A0A0A0L044|A0A0A0L044_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628950 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 7.6e-91
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
           MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL
Sbjct: 1   MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60

Query: 61  IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
           IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG
Sbjct: 61  IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120

Query: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 174
           GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI
Sbjct: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 173

[Close]

BLAST of CsaV3_4G033390 vs. TrEMBL
Match: tr|A0A1S3CK48|A0A1S3CK48_CUCME (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103501854 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.1e-81
Identity = 159/173 (91.91%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MNLLNSTLLISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLAL 60
           MNLLNS LLISLLFALFSPAKPDAAYI NLC KTEQPKICSDCLNSG+GSQSA GRGLAL
Sbjct: 1   MNLLNSILLISLLFALFSPAKPDAAYIGNLCSKTEQPKICSDCLNSGRGSQSASGRGLAL 60

Query: 61  IAVECAERNTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYG 120
           IAV CAERNTKLMAQRVGNLVRSTPESTLK LLNECWMSTGYAAGNFPGIARSVAAGDY 
Sbjct: 61  IAVGCAERNTKLMAQRVGNLVRSTPESTLKMLLNECWMSTGYAAGNFPGIARSVAAGDYA 120

Query: 121 GGKSVLEITIRNVNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 174
            GK+VLEITIRNVNMC+ NFKKNP+I VPSEVLAGTVAVTQDCRIVTQILNNI
Sbjct: 121 SGKNVLEITIRNVNMCLVNFKKNPNIPVPSEVLAGTVAVTQDCRIVTQILNNI 173

[Close]

BLAST of CsaV3_4G033390 vs. TrEMBL
Match: tr|A0A2N9GWP3|A0A2N9GWP3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32014 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20
Identity = 65/171 (38.01%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 8   LLISLLFALFSPA---KPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLALIAVE 67
           +LI +    + P+   + D   I  LC K + P IC  CL S   S++A  + L++IA+ 
Sbjct: 9   VLIFIFTLSYQPSPLVRSDDNLIGRLCSKADFPSICLQCLTSNPSSKTASAQALSIIAIH 68

Query: 68  CAERNTKLMAQRVGNLVRSTPE-STLKTLLNECWMSTGYAAGNFPGIARSVAAGDYGGGK 127
           CAE    L ++   NL  STP  S LK +L  C      A  +F  + +SV  GDYGG K
Sbjct: 69  CAENEANLWSEATSNLYESTPNGSPLKKILEFCAGQAFVAGDDFTAVLQSVNGGDYGGAK 128

Query: 128 SVLEITIRN-VNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 174
            +L   I+  V+ C D+F KNP++ +P EV AG   VT  C+ V  IL+NI
Sbjct: 129 YILINQIQPLVDACKDDFSKNPNVPIPQEVAAGFQQVTFHCKNVEAILSNI 179

[Close]

BLAST of CsaV3_4G033390 vs. TrEMBL
Match: tr|A0A2N9GX91|A0A2N9GX91_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32015 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.1e-20
Identity = 58/166 (34.94%), Postives = 93/166 (56.02%), Query Frame = 0


Query: 9   LISLLFALFSPAKPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLALIAVECAER 68
           + +L +  F+  + D   I +LC K + P ICSDCL S   S++A    L++IA+ CA++
Sbjct: 14  IFTLSYQPFTLVRADDNLINSLCSKADFPSICSDCLTSNPSSKTADAPELSIIAISCAQK 73

Query: 69  NTKLMAQRVGNLVRSTPESTLKTLLNECWMSTGYAAGNFPGIARSVAAGDYGGGKSVLEI 128
              L+ + + +   S PE  LKT+L +C   T  A  +F  + +SV+  +YGG K ++  
Sbjct: 74  EANLLYEDLSSQYESAPEGPLKTILGDCAERTLEARNDFESVLQSVSVRNYGGAKGIVIN 133

Query: 129 TIRN-VNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 174
            I+  V+ C  +F   P I +P++V AG   VT  C+ V  IL+NI
Sbjct: 134 LIQPLVDSCTGHFSDLPDIPIPADVAAGIQEVTFHCKNVEAILSNI 179

[Close]

BLAST of CsaV3_4G033390 vs. TrEMBL
Match: tr|A0A2N9FNA6|A0A2N9FNA6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16301 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-19
Identity = 62/171 (36.26%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 8   LLISLLFALFSPA---KPDAAYIQNLCGKTEQPKICSDCLNSGQGSQSAIGRGLALIAVE 67
           +LI +    + P+   + D   I++LC K + P +C  CL S   S++A  + L++IA+ 
Sbjct: 9   VLIFIFTVSYQPSPLVRSDYNLIRSLCSKADFPSVCLQCLTSNPSSKTASAQALSIIAIH 68

Query: 68  CAERNTKLMAQRVGNLVRSTPE-STLKTLLNECWMSTGYAAGNFPGIARSVAAGDYGGGK 127
           CAE    L  +   NL  STP  S LK  L  C      A  +F  + +SV+  DYGG K
Sbjct: 69  CAENEANLWREATSNLYESTPNGSPLKKSLEFCAGQAFVAGDDFTAVLQSVSGRDYGGAK 128

Query: 128 SVLEITIRN-VNMCMDNFKKNPSILVPSEVLAGTVAVTQDCRIVTQILNNI 174
            +L   I+  V+ C D+  KNP++ +P EV AG + VT  C+ V  IL+NI
Sbjct: 129 YILINQIQPLVDACKDDLLKNPNVPIPQEVAAGILLVTFHCKNVEAILSNI 179

The following BLAST results are available for this feature:

BLAST of CsaV3_4G033390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654411.1	1.2e-90	100.00	PREDICTED: pectinesterase inhibitor-like [Cucumis sativus] >KGN55098.1 hypotheti...	[more]
XP_008463801.1	1.7e-81	91.91	PREDICTED: pectinesterase inhibitor-like [Cucumis melo]	[more]
XP_022940751.1	1.4e-56	66.86	uncharacterized protein LOC111446254 [Cucurbita moschata]	[more]
XP_023536163.1	7.1e-56	65.32	uncharacterized protein LOC111797408 [Cucurbita pepo subsp. pepo]	[more]
XP_022981703.1	1.2e-55	66.29	uncharacterized protein LOC111480766 [Cucurbita maxima]	[more]

BLAST of CsaV3_4G033390 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G033390 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G033390 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L044\|A0A0A0L044_CUCSA	7.6e-91	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628950 PE=4 SV=1	[more]
tr\|A0A1S3CK48\|A0A1S3CK48_CUCME	1.1e-81	91.91	pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103501854 PE=4 SV=1	[more]
tr\|A0A2N9GWP3\|A0A2N9GWP3_FAGSY	1.1e-20	38.01	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32014 PE=4 SV=1	[more]
tr\|A0A2N9GX91\|A0A2N9GX91_FAGSY	7.1e-20	34.94	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32015 PE=4 SV=1	[more]
tr\|A0A2N9FNA6\|A0A2N9FNA6_FAGSY	2.1e-19	36.26	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16301 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0043086	negative regulation of catalytic activity

Vocabulary: **Molecular Function**
Term	Definition
GO:0046910	pectinesterase inhibitor activity
GO:0004857	enzyme inhibitor activity

Vocabulary: **INTERPRO**
Term	Definition
IPR034086	PMEI_plant
IPR035513	Invertase/methylesterase_inhib
IPR006501	Pectinesterase_inhib_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004857	enzyme inhibitor activity
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0046910	pectinesterase inhibitor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G033390.1	CsaV3_4G033390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006501	Pectinesterase inhibitor domain	SMART	SM00856	PMEI_2	coord: 22..169 e-value: 1.7E-4 score: 30.9
IPR006501	Pectinesterase inhibitor domain	PFAM	PF04043	PMEI	coord: 26..172 e-value: 7.3E-12 score: 45.8
IPR006501	Pectinesterase inhibitor domain	TIGRFAM	TIGR01614	TIGR01614	coord: 4..170 e-value: 3.0E-19 score: 67.0
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	GENE3D	G3DSA:1.20.140.40		coord: 23..173 e-value: 1.9E-22 score: 81.7
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	SUPERFAMILY	SSF101148	Plant invertase/pectin methylesterase inhibitor	coord: 25..172
None	No IPR available	PANTHER	PTHR31080	FAMILY NOT NAMED	coord: 8..172
IPR034086	Pectinesterase inhibitor, plant	CDD	cd15797	PMEI	coord: 23..173 e-value: 3.08299E-28 score: 102.886

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G033390	CSPI04G23170	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G033390	CmaCh01G012300	Cucurbita maxima (Rimu)	cmacucB0566
CsaV3_4G033390	CmoCh01G012830	Cucurbita moschata (Rifu)	cmocucB0552
CsaV3_4G033390	Cp4.1LG06g06580	Cucurbita pepo (Zucchini)	cpecucB0970
CsaV3_4G033390	Cp4.1LG02g01960	Cucurbita pepo (Zucchini)	cpecucB0702
CsaV3_4G033390	CsGy4G021550	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G033390	Carg17074	Silver-seed gourd	carcucB0194
CsaV3_4G033390	Carg14715	Silver-seed gourd	carcucB0344
CsaV3_4G033390	MELO3C025616	Melon (DHL92) v3.5.1	cucmeB299
CsaV3_4G033390	MELO3C025616.2	Melon (DHL92) v3.6.1	cucmedB291

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G033390	Cucumber (Gy14) v2	cgybcucB034
CsaV3_4G033390	Cucumber (Gy14) v1	cgycucB167
CsaV3_4G033390	Cucurbita maxima (Rimu)	cmacucB0028
CsaV3_4G033390	Cucurbita maxima (Rimu)	cmacucB0034
CsaV3_4G033390	Cucurbita maxima (Rimu)	cmacucB0258
CsaV3_4G033390	Cucurbita maxima (Rimu)	cmacucB0396
CsaV3_4G033390	Cucurbita moschata (Rifu)	cmocucB0016
CsaV3_4G033390	Cucurbita moschata (Rifu)	cmocucB0022
CsaV3_4G033390	Cucurbita moschata (Rifu)	cmocucB0246
CsaV3_4G033390	Cucurbita moschata (Rifu)	cmocucB0393
CsaV3_4G033390	Cucurbita pepo (Zucchini)	cpecucB0270
CsaV3_4G033390	Cucurbita pepo (Zucchini)	cpecucB0976
CsaV3_4G033390	Wild cucumber (PI 183967)	cpicucB039
CsaV3_4G033390	Bottle gourd (USVL1VR-Ls)	cuclsiB291
CsaV3_4G033390	Bottle gourd (USVL1VR-Ls)	cuclsiB304
CsaV3_4G033390	Watermelon (Charleston Gray)	cucwcgB288
CsaV3_4G033390	Watermelon (97103) v1	cucwmB367
CsaV3_4G033390	Watermelon (97103) v2	cucwmbB281
CsaV3_4G033390	Wax gourd	cucwgoB426
CsaV3_4G033390	Cucumber (Chinese Long) v3	cuccucB030
CsaV3_4G033390	Silver-seed gourd	carcucB0196
CsaV3_4G033390	Silver-seed gourd	carcucB0690