CsaV3_4G030340 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G030340
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionProteinase inhibitor I25, cystatin
Locationchr4 : 20178297 .. 20179035 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCAATCTATGTGAATTAGATTTGTGGTTATCGATATCGTCTAAGGTTGAACAACAATTATAAACACCAAGCTTCGTCTCAACATTGAACGGTACAAATCGACCTTATAACGTTTAGGGAATTAAAAAGGTACTGTATAATGAGTATTGAAGAGTCACGTCATCGTTTGAAACCTATTATAGATATAAATGATCCCCATGTGCAAGCACTAGGGGAGTTAGCGGTGGAAAACCTTTACTCCAAGAACTCTGGGGAGAAATTGAAGTTTGTGCGTGTGGTGAATGGTTTGAAGAGTGACAAATACATTGGGCCTGGGTTTACTGAAGTAATATTATATCACCTTGTGCTGGAAGCTAAAACTAATGAAGAAATCAATTGGACATATGCCACCAAATTGGAAGAGGTATCAGGCGGCCTAATAAGGCATGTATTCCTATCTTTTGAACCTGTTCTCCCATACTACAAGCCATAATATTGGCATCATCTCTCTACTTCGGAACAAGCTTAAATAAGTTGTACCCTTTACCACCTTTGTCTAACAAAAATGGTAGCATGATATAAATAAAATAGTACTGAGATGTTACTGTCATCGATATTGAGTGTTTTGGATCCAAGTTGTTATATTAAACTCATTTTCTTCCGTCAATTTTCAATCTGACACCGACGTCTTTTTCTACTTTTTTTGCGGTTCACGAATCTCAATTCCGTTCTGCTTTCCCTTCGTCATGTATTTCAACA

mRNA sequence

ATGAGTATTGAAGAGTCACGTCATCGTTTGAAACCTATTATAGATATAAATGATCCCCATGTGCAAGCACTAGGGGAGTTAGCGGTGGAAAACCTTTACTCCAAGAACTCTGGGGAGAAATTGAAGTTTGTGCGTGTGGTGAATGGTTTGAAGAGTGACAAATACATTGGGCCTGGGTTTACTGAAGTAATATTATATCACCTTGTGCTGGAAGCTAAAACTAATGAAGAAATCAATTGGACATATGCCACCAAATTGGAAGAGGTATCAGGCGGCCTAATAAGGCATGTATTCCTATCTTTTGAACCTGTTCTCCCATACTACAAGCCATAA

Coding sequence (CDS)

ATGAGTATTGAAGAGTCACGTCATCGTTTGAAACCTATTATAGATATAAATGATCCCCATGTGCAAGCACTAGGGGAGTTAGCGGTGGAAAACCTTTACTCCAAGAACTCTGGGGAGAAATTGAAGTTTGTGCGTGTGGTGAATGGTTTGAAGAGTGACAAATACATTGGGCCTGGGTTTACTGAAGTAATATTATATCACCTTGTGCTGGAAGCTAAAACTAATGAAGAAATCAATTGGACATATGCCACCAAATTGGAAGAGGTATCAGGCGGCCTAATAAGGCATGTATTCCTATCTTTTGAACCTGTTCTCCCATACTACAAGCCATAA

Protein sequence

MSIEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLVLEAKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLPYYKP
Homology
[Close]
BLAST of CsaV3_4G030340 vs. NCBI nr
Match: KGN54823.1 (hypothetical protein Csa_4G508510 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 2.6e-56
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MSIEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGF 60
           MSIEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGF
Sbjct: 1   MSIEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGF 60

Query: 61  TEVILYHLVLEAKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLPYYKP 111
           TEVILYHLVLEAKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLPYYKP
Sbjct: 61  TEVILYHLVLEAKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLPYYKP 110

[Close]
BLAST of CsaV3_4G030340 vs. NCBI nr
Match: KGN54824.1 (hypothetical protein Csa_4G508520 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 5.5e-46
Identity = 97/111 (87.39%), Postives = 101/111 (90.99%), Query Frame = 0 

Query: 1   MSIEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGF 60
           MSIEE  HRLKPIIDINDPHVQ +G+LAVE+  S N GEKLKFVRVVNGLKSDKYIGPGF
Sbjct: 1   MSIEEIHHRLKPIIDINDPHVQIIGKLAVEDHDSHNPGEKLKFVRVVNGLKSDKYIGPGF 60

Query: 61  TEVILYHLVLEAKTNEEINWTYATKLEEV-SGGLIRHVFLSFEPVLPYYKP 111
           TEVILYHLVLEAKTNEEINWTYATKLE+V SG LIRHVFLSFEPVLPY KP
Sbjct: 61  TEVILYHLVLEAKTNEEINWTYATKLEKVYSGCLIRHVFLSFEPVLPYNKP 111

[Close]
BLAST of CsaV3_4G030340 vs. NCBI nr
Match: KGN54821.1 (Proteinase inhibitor I25, cystatin [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 1.2e-21
Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 0 

Query: 1   MSIEESRHRLKPIIDINDP-HVQA-LGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGP 60
           MS+EE+ H  KPI DIND   VQ+ +G+LAVE+ ++K +G+ L+ V VVNGL+S  ++ P
Sbjct: 10  MSVEEAYHTSKPIEDINDDLQVQSIIGQLAVED-HNKKTGDNLELVDVVNGLRSGIFVQP 69

Query: 61  GFT-EVILYHLVLEAKTNEEINWTYATKLEEVSGGL-IRHVFLSFEPVLPYYKP 111
           G T E ILYHL++EAKT E INWTY  KL E+  G  IR+ F SFEP+LPYY P
Sbjct: 70  GSTHEGILYHLLVEAKTIEGINWTYVAKLLELYVGCRIRYEFKSFEPLLPYYNP 122

[Close]
BLAST of CsaV3_4G030340 vs. NCBI nr
Match: XP_008442277.1 (PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo])

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-09
Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 0 

Query: 11  KPIIDINDP-HVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLV 70
           KPI DIND   VQ LG L V++ ++K +GE LKFVRVVNGL +           +LY LV
Sbjct: 8   KPIEDINDNLEVQDLGNLTVDD-HNKKTGENLKFVRVVNGLAASFSDPISPLGGVLYELV 67

Query: 71  LEAKTNEEINWTYATKLEEVSGGL----IRHVFLSFEPVLPY 108
           LEA T  +INWTY  ++ +         + + F SF+PVL Y
Sbjct: 68  LEAITTSKINWTYKARVSKSKAITPPFHMLYSFQSFKPVLEY 108

[Close]
BLAST of CsaV3_4G030340 vs. NCBI nr
Match: KGN51193.1 (hypothetical protein Csa_5G487700 [Cucumis sativus])

HSP 1 Score: 57.8 bits (138), Expect = 2.8e-05
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 0 

Query: 12  PIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLVLE 71
           PI D++   +Q +G +AV      ++GE L+FV+V+NGL+  +    GF   I+Y LVL 
Sbjct: 22  PIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGLEKGR---RGFQ--IVYTLVLS 81

Query: 72  AKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLP 107
           AK +  I WTY  K+   +   +R     FE VLP
Sbjct: 82  AKNSLGIVWTYKAKVIFNNRAAVR--LPEFEAVLP 109

[Close]
BLAST of CsaV3_4G030340 vs. TrEMBL
Match: tr|A0A0A0KZ98|A0A0A0KZ98_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508510 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-56
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MSIEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGF 60
           MSIEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGF
Sbjct: 1   MSIEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGF 60

Query: 61  TEVILYHLVLEAKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLPYYKP 111
           TEVILYHLVLEAKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLPYYKP
Sbjct: 61  TEVILYHLVLEAKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLPYYKP 110

[Close]
BLAST of CsaV3_4G030340 vs. TrEMBL
Match: tr|A0A0A0L191|A0A0A0L191_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508520 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.7e-46
Identity = 97/111 (87.39%), Postives = 101/111 (90.99%), Query Frame = 0 

Query: 1   MSIEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGF 60
           MSIEE  HRLKPIIDINDPHVQ +G+LAVE+  S N GEKLKFVRVVNGLKSDKYIGPGF
Sbjct: 1   MSIEEIHHRLKPIIDINDPHVQIIGKLAVEDHDSHNPGEKLKFVRVVNGLKSDKYIGPGF 60

Query: 61  TEVILYHLVLEAKTNEEINWTYATKLEEV-SGGLIRHVFLSFEPVLPYYKP 111
           TEVILYHLVLEAKTNEEINWTYATKLE+V SG LIRHVFLSFEPVLPY KP
Sbjct: 61  TEVILYHLVLEAKTNEEINWTYATKLEKVYSGCLIRHVFLSFEPVLPYNKP 111

[Close]
BLAST of CsaV3_4G030340 vs. TrEMBL
Match: tr|A0A0A0L3W1|A0A0A0L3W1_CUCSA (Proteinase inhibitor I25, cystatin OS=Cucumis sativus OX=3659 GN=Csa_4G508490 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.2e-22
Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 0 

Query: 1   MSIEESRHRLKPIIDINDP-HVQA-LGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGP 60
           MS+EE+ H  KPI DIND   VQ+ +G+LAVE+ ++K +G+ L+ V VVNGL+S  ++ P
Sbjct: 10  MSVEEAYHTSKPIEDINDDLQVQSIIGQLAVED-HNKKTGDNLELVDVVNGLRSGIFVQP 69

Query: 61  GFT-EVILYHLVLEAKTNEEINWTYATKLEEVSGGL-IRHVFLSFEPVLPYYKP 111
           G T E ILYHL++EAKT E INWTY  KL E+  G  IR+ F SFEP+LPYY P
Sbjct: 70  GSTHEGILYHLLVEAKTIEGINWTYVAKLLELYVGCRIRYEFKSFEPLLPYYNP 122

[Close]
BLAST of CsaV3_4G030340 vs. TrEMBL
Match: tr|A0A1S3B5B9|A0A1S3B5B9_CUCME (Cysteine proteinase inhibitor OS=Cucumis melo OX=3656 GN=LOC103486185 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.2e-10
Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 0 

Query: 11  KPIIDINDP-HVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLV 70
           KPI DIND   VQ LG L V++ ++K +GE LKFVRVVNGL +           +LY LV
Sbjct: 8   KPIEDINDNLEVQDLGNLTVDD-HNKKTGENLKFVRVVNGLAASFSDPISPLGGVLYELV 67

Query: 71  LEAKTNEEINWTYATKLEEVSGGL----IRHVFLSFEPVLPY 108
           LEA T  +INWTY  ++ +         + + F SF+PVL Y
Sbjct: 68  LEAITTSKINWTYKARVSKSKAITPPFHMLYSFQSFKPVLEY 108

[Close]
BLAST of CsaV3_4G030340 vs. TrEMBL
Match: tr|A0A0A0KNL2|A0A0A0KNL2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G487700 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-05
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 0 

Query: 12  PIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLVLE 71
           PI D++   +Q +G +AV      ++GE L+FV+V+NGL+  +    GF   I+Y LVL 
Sbjct: 22  PIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGLEKGR---RGFQ--IVYTLVLS 81

Query: 72  AKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLP 107
           AK +  I WTY  K+   +   +R     FE VLP
Sbjct: 82  AKNSLGIVWTYKAKVIFNNRAAVR--LPEFEAVLP 109

The following BLAST results are available for this feature:
BLAST of CsaV3_4G030340 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54823.12.6e-56100.00hypothetical protein Csa_4G508510 [Cucumis sativus][more]
KGN54824.15.5e-4687.39hypothetical protein Csa_4G508520 [Cucumis sativus][more]
KGN54821.11.2e-2156.14Proteinase inhibitor I25, cystatin [Cucumis sativus][more]
XP_008442277.11.1e-0945.10PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo][more]
KGN51193.12.8e-0537.89hypothetical protein Csa_5G487700 [Cucumis sativus][more]
BLAST of CsaV3_4G030340 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G030340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G030340 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KZ98|A0A0A0KZ98_CUCSA1.7e-56100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508510 PE=4 SV=1[more]
tr|A0A0A0L191|A0A0A0L191_CUCSA3.7e-4687.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508520 PE=4 SV=1[more]
tr|A0A0A0L3W1|A0A0A0L3W1_CUCSA8.2e-2256.14Proteinase inhibitor I25, cystatin OS=Cucumis sativus OX=3659 GN=Csa_4G508490 PE... [more]
tr|A0A1S3B5B9|A0A1S3B5B9_CUCME7.2e-1045.10Cysteine proteinase inhibitor OS=Cucumis melo OX=3656 GN=LOC103486185 PE=3 SV=1[more]
tr|A0A0A0KNL2|A0A0A0KNL2_CUCSA1.8e-0537.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G487700 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G030340.1CsaV3_4G030340.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 9..105
e-value: 3.6E-10
score: 41.7
NoneNo IPR availableSUPERFAMILYSSF54403Cystatin/monellincoord: 17..88

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G030340Silver-seed gourdcarcucB0510
CsaV3_4G030340Silver-seed gourdcarcucB0551
CsaV3_4G030340Cucumber (Gy14) v2cgybcucB171
CsaV3_4G030340Cucumber (Gy14) v1cgycucB406
CsaV3_4G030340Cucurbita maxima (Rimu)cmacucB0793
CsaV3_4G030340Cucurbita maxima (Rimu)cmacucB1018
CsaV3_4G030340Cucurbita maxima (Rimu)cmacucB1023
CsaV3_4G030340Cucurbita moschata (Rifu)cmocucB0778
CsaV3_4G030340Cucurbita moschata (Rifu)cmocucB0784
CsaV3_4G030340Cucurbita moschata (Rifu)cmocucB1001
CsaV3_4G030340Cucurbita moschata (Rifu)cmocucB1007
CsaV3_4G030340Cucurbita pepo (Zucchini)cpecucB0077
CsaV3_4G030340Cucurbita pepo (Zucchini)cpecucB0603
CsaV3_4G030340Wild cucumber (PI 183967)cpicucB212
CsaV3_4G030340Wild cucumber (PI 183967)cpicucB214
CsaV3_4G030340Bottle gourd (USVL1VR-Ls)cuclsiB274
CsaV3_4G030340Melon (DHL92) v3.5.1cucmeB336
CsaV3_4G030340Melon (DHL92) v3.6.1cucmedB329
CsaV3_4G030340Watermelon (Charleston Gray)cucwcgB319
CsaV3_4G030340Watermelon (97103) v1cucwmB357
CsaV3_4G030340Watermelon (97103) v2cucwmbB304
CsaV3_4G030340Watermelon (97103) v2cucwmbB308
CsaV3_4G030340Wax gourdcucwgoB398
CsaV3_4G030340Wax gourdcucwgoB419