CsaV3_4G030240 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G030240
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionSelf-incompatibility protein
Locationchr4 : 19963679 .. 19964237 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCCTACGTACATATATCCACTATTTGCACCACGTCCCAATCATACCAATACAAAATAAAGGGTAGAAAGCCTTCGTATTCTTGTCTCTTCCTTTGTGTTTCAAACGACCCCTTAAAAATGGGCTCATCTCCAACGCTTGCACTGTCTTTGCTAATTTTATTTTTGTGTAACCTATGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCTTCAACCAAATTGAATATGGCATACCTGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCACTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCGTGGGGACGACCCTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACGACAAAAGGGATGCAGGGAAATGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGAAATTTGCTATAACTACGGAGATAAGGAGCCAGGCATTATTGTGTAA

mRNA sequence

CCCTACGTACATATATCCACTATTTGCACCACGTCCCAATCATACCAATACAAAATAAAGGGTAGAAAGCCTTCGTATTCTTGTCTCTTCCTTTGTGTTTCAAACGACCCCTTAAAAATGGGCTCATCTCCAACGCTTGCACTGTCTTTGCTAATTTTATTTTTGTGTAACCTATGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCTTCAACCAAATTGAATATGGCATACCTGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCACTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCGTGGGGACGACCCTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACGACAAAAGGGATGCAGGGAAATGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGAAATTTGCTATAACTACGGAGATAAGGAGCCAGGCATTATTGTGTAA

Coding sequence (CDS)

CCCTACGTACATATATCCACTATTTGCACCACGTCCCAATCATACCAATACAAAATAAAGGGTAGAAAGCCTTCGTATTCTTGTCTCTTCCTTTGTGTTTCAAACGACCCCTTAAAAATGGGCTCATCTCCAACGCTTGCACTGTCTTTGCTAATTTTATTTTTGTGTAACCTATGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCTTCAACCAAATTGAATATGGCATACCTGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCACTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCGTGGGGACGACCCTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACGACAAAAGGGATGCAGGGAAATGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGAAATTTGCTATAACTACGGAGATAAGGAGCCAGGCATTATTGTGTAA

Protein sequence

PYVHISTICTTSQSYQYKIKGRKPSYSCLFLCVSNDPLKMGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKNPGKEICYNYGDKEPGIIV
Homology
[Close]
BLAST of CsaV3_4G030240 vs. NCBI nr
Match: XP_004515192.1 (PREDICTED: uncharacterized protein LOC101514444 [Cicer arietinum])

HSP 1 Score: 119.4 bits (298), Expect = 1.3e-23
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 0 

Query: 69  PVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWT 128
           PV  VV+ N++  G+ +TVHCKSK++DLG+HVL  GQ Y FKFR NL G TLFFC F W 
Sbjct: 33  PVLNVVMTNKLTDGLKLTVHCKSKDNDLGIHVLVPGQSYGFKFRHNLFGETLFFCFFKW- 92

Query: 129 GQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKNPGKEICY 175
                +WF++++D+RD   C +C W I +   CL+DPK    +ICY
Sbjct: 93  -NDVTHWFDIYEDERDYATCKSCYWDIKQTGPCLKDPKG---DICY 133

[Close]
BLAST of CsaV3_4G030240 vs. NCBI nr
Match: KGN61530.1 (hypothetical protein Csa_2G162130 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 2.9e-23
Identity = 62/142 (43.66%), Postives = 82/142 (57.75%), Query Frame = 0 

Query: 39  KMGSSPTLALSLLI-LFLCNLCAIQGSIFIQPVTTVVIFNQI-EYGIPVTVHCKSKNDDL 98
           KM S  T  LSL I L    +  I+G  F  P  TV I N + +    +T+HCKS +DDL
Sbjct: 41  KMSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDL 100

Query: 99  GVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKC--TTCTWI 158
           GVH L     Y+F FRPN  G+TLF+C+F WTG    ++FN++ D RD  KC  T C WI
Sbjct: 101 GVHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSS--HYFNIYQDLRDRAKCNDTLCLWI 160

Query: 159 IHEYSMCLQDPKNPGKEICYNY 177
           + E  +C+ D K    +ICY +
Sbjct: 161 VGEQGLCMFDYKTNAYDICYTW 180

[Close]
BLAST of CsaV3_4G030240 vs. NCBI nr
Match: EEF44294.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 117.1 bits (292), Expect = 6.5e-23
Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 0 

Query: 72  TVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 131
           TV+I N +  G+ ++VHCKSK DDLGVH+LP    Y F+F+PN  G T FFC FTW  + 
Sbjct: 133 TVIITNDLNQGLDLSVHCKSKEDDLGVHILPPHNNYQFEFQPNFWGVTQFFCGFTWK-KT 192

Query: 132 QIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKNPGKEICYNY 177
            I+WF+++   RD  KC+TC W++ +   C+ + K     +CY++
Sbjct: 193 GIHWFDIYIQNRDYPKCSTCKWVLRQKGPCMFEEKTNNYTLCYDW 236

[Close]
BLAST of CsaV3_4G030240 vs. NCBI nr
Match: OWM67577.1 (hypothetical protein CDL15_Pgr028440 [Punica granatum])

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 59/135 (43.70%), Postives = 81/135 (60.00%), Query Frame = 0 

Query: 42  SSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVL 101
           S  +L L + +L L   C  + SIF +  T V+I N ++  + +TVHCKSK+DDLGVHV+
Sbjct: 4   SKSSLLLLVALLLLWGRC--ESSIFQKHKTHVLIRNDLQEQLDMTVHCKSKDDDLGVHVI 63

Query: 102 PLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMC 161
           P G  Y F FRPN   TTLF+C+F W G  + Y   V+D +RD  +C  CTW I   S C
Sbjct: 64  PPGGSYGFNFRPNFFCTTLFWCNFEWPGASRGY--KVYDCQRDYDRCFDCTWSIKSSSPC 123

Query: 162 LQDPKNPGKEICYNY 177
           L + K    ++C N+
Sbjct: 124 LYNAKTSQYDLCDNW 134

[Close]
BLAST of CsaV3_4G030240 vs. NCBI nr
Match: XP_010644710.1 (PREDICTED: uncharacterized protein LOC104877646 [Vitis vinifera])

HSP 1 Score: 112.1 bits (279), Expect = 2.1e-21
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 0 

Query: 50  LLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSF 109
           +L++FL  LC     +F +    V I N +E G+ + +HCKSKNDDLG HVL   Q + F
Sbjct: 12  VLLVFLIRLCDGGPGVF-EKKADVKIINGLEAGVDLNIHCKSKNDDLGTHVLGFDQFFEF 71

Query: 110 KFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCT-TCTWIIHEYSMCLQDPKNP 169
            FRPN  GTTL+FC F W  + + +WF+++  KRD G+C   C W++     CL + K  
Sbjct: 72  HFRPNFWGTTLYFCRFWW--ESESHWFDIYVQKRDVGRCNKKCWWLVGAAGPCLLNDKIG 131

Query: 170 GKEICYNY---GDKEPGI 184
             +IC N+   G  + GI
Sbjct: 132 VYDICDNWNGDGSSQVGI 146

[Close]
BLAST of CsaV3_4G030240 vs. TAIR10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21
Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 0 

Query: 72  TVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 131
           TVV    +  G P+T+HCKSK DDLG+HV+P  Q Y FKF+PNL  +TLFFCSF W  Q 
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 132 QIYWFNVFDDKRDAGKCTTCTWIIHEYSMC 162
           +   F+++D +RD G C  C W I     C
Sbjct: 89  KS--FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]
BLAST of CsaV3_4G030240 vs. TAIR10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 98.6 bits (244), Expect = 4.3e-21
Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = 0 

Query: 71  TTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLV-GTTLFFCSFTWTG 130
           + V I N++  G  + +HCKS +DDLG+ +L     +SFKFRP++V G TLFFC FTW G
Sbjct: 38  SVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPG 97

Query: 131 QHQIYWFNVFDDKRDAGK----CTTCTWIIHEYSMCLQDPKNPGKEICYNY 177
           Q +  WFN++DD RD  +    C  C W I +Y  C     +    ICY++
Sbjct: 98  QSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEIDDAFNICYDW 146

[Close]
BLAST of CsaV3_4G030240 vs. TAIR10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-19
Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 0 

Query: 73  VVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQ 132
           V I N++  G+ + +HCKS +DDLG+ +L     +SFKFR ++VGTTLF+C FTW GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 133 IYWFNVFDDKRDAGK----CTTCTWIIHEYSMCLQDPKNPGKEICYNY 177
              F+++DD RD  +    C  C W I     C+    +    ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSESDHAFNICYDW 144

[Close]
BLAST of CsaV3_4G030240 vs. TAIR10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 90.9 bits (224), Expect = 9.0e-19
Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 0 

Query: 66  FIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSF 125
           F  P TTVVI+N +   +P+  HCKSKNDDLG   + +   +SF+FRP++ G TLFFC F
Sbjct: 23  FDNPRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGF 82

Query: 126 TWTGQHQIYWFNVFDDKRDAG----KCTTCTWIIHEYSMCLQDPKNPGKEIC 174
            W    +++WF+++   RD       C  C W I +   C  +  +   ++C
Sbjct: 83  IW--DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVC 132

[Close]
BLAST of CsaV3_4G030240 vs. TAIR10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-16
Identity = 47/142 (33.10%), Postives = 74/142 (52.11%), Query Frame = 0 

Query: 40  MGSSPT-LALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGV 99
           MGS  T L   ++++F+        +I  +  T+VVI+N +  G+P+  HCKS+ DDLG 
Sbjct: 1   MGSLETCLLFFVMVMFM-------SAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGY 60

Query: 100 HVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAG----KCTTCTWI 159
             L  G+ +SF F P++ G TLF+C F+W  +  I  F+++   RD       C  C W 
Sbjct: 61  QSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHI--FDIYKQSRDKEFQEFGCKKCEWK 120

Query: 160 IHEYSMCLQDPKNPGKEICYNY 177
           I +   C    K    + CY++
Sbjct: 121 IRKNGPCKFYKKTGMFDHCYSW 133

[Close]
BLAST of CsaV3_4G030240 vs. Swiss-Prot
Match: sp|O23020|SPH5_ARATH (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.7e-20
Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 0 

Query: 72  TVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 131
           TVV    +  G P+T+HCKSK DDLG+HV+P  Q Y FKF+PNL  +TLFFCSF W  Q 
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 132 QIYWFNVFDDKRDAGKCTTCTWIIHEYSMC 162
           +   F+++D +RD G C  C W I     C
Sbjct: 89  KS--FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]
BLAST of CsaV3_4G030240 vs. Swiss-Prot
Match: sp|F4JZG1|SPH4_ARATH (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.8e-20
Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = 0 

Query: 71  TTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLV-GTTLFFCSFTWTG 130
           + V I N++  G  + +HCKS +DDLG+ +L     +SFKFRP++V G TLFFC FTW G
Sbjct: 38  SVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPG 97

Query: 131 QHQIYWFNVFDDKRDAGK----CTTCTWIIHEYSMCLQDPKNPGKEICYNY 177
           Q +  WFN++DD RD  +    C  C W I +Y  C     +    ICY++
Sbjct: 98  QSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEIDDAFNICYDW 146

[Close]
BLAST of CsaV3_4G030240 vs. Swiss-Prot
Match: sp|Q9FMQ4|SPH3_ARATH (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.3e-18
Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 0 

Query: 73  VVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQ 132
           V I N++  G+ + +HCKS +DDLG+ +L     +SFKFR ++VGTTLF+C FTW GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 133 IYWFNVFDDKRDAGK----CTTCTWIIHEYSMCLQDPKNPGKEICYNY 177
              F+++DD RD  +    C  C W I     C+    +    ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSESDHAFNICYDW 144

[Close]
BLAST of CsaV3_4G030240 vs. Swiss-Prot
Match: sp|P0DN93|SPH29_ARATH (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17
Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 0 

Query: 38  LKMGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLG 97
           +K  S   + LS+++ ++ + C           T V + N I     +T+ C+SK+DDLG
Sbjct: 1   MKNSSKIFVVLSIILFYVISSCHGYNPF---AKTVVTVTNNISPQTTLTISCRSKDDDLG 60

Query: 98  VHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHE 157
            H+L  GQ + +KFRP+   TTLF C F W   + + WF+ +   RD G C +C W I+ 
Sbjct: 61  EHLLLHGQAFLWKFRPSWFRTTLFTCKFLW--NNNVKWFDTYRSDRDQGHCYSCNWSINA 120

Query: 158 YSMCLQDPKNPGKEICY 175
            S C+    N   + CY
Sbjct: 121 DSACISGNFNKKFDRCY 132

[Close]
BLAST of CsaV3_4G030240 vs. Swiss-Prot
Match: sp|F4JLQ5|SPH2_ARATH (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.4e-14
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 0 

Query: 64  SIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFC 123
           S+F     TV I N +   + +  HCKSK+DDLG   L  G+ +SF F     G TL+FC
Sbjct: 41  SVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFC 100

Query: 124 SFTWTGQHQIYWFNVFDDKRDAG---KCTT--CTWIIHEYSMCLQDPKNPGKEICY 175
           SF+W   ++ + F+++ D RD+G   KC +  C W I     C  + +    ++CY
Sbjct: 101 SFSW--PNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCY 154

[Close]
BLAST of CsaV3_4G030240 vs. TrEMBL
Match: tr|A0A1S2Z503|A0A1S2Z503_CICAR (uncharacterized protein LOC101514444 OS=Cicer arietinum OX=3827 GN=LOC101514444 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 8.6e-24
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 0 

Query: 69  PVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWT 128
           PV  VV+ N++  G+ +TVHCKSK++DLG+HVL  GQ Y FKFR NL G TLFFC F W 
Sbjct: 33  PVLNVVMTNKLTDGLKLTVHCKSKDNDLGIHVLVPGQSYGFKFRHNLFGETLFFCFFKW- 92

Query: 129 GQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKNPGKEICY 175
                +WF++++D+RD   C +C W I +   CL+DPK    +ICY
Sbjct: 93  -NDVTHWFDIYEDERDYATCKSCYWDIKQTGPCLKDPKG---DICY 133

[Close]
BLAST of CsaV3_4G030240 vs. TrEMBL
Match: tr|A0A0A0LI28|A0A0A0LI28_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.9e-23
Identity = 62/142 (43.66%), Postives = 82/142 (57.75%), Query Frame = 0 

Query: 39  KMGSSPTLALSLLI-LFLCNLCAIQGSIFIQPVTTVVIFNQI-EYGIPVTVHCKSKNDDL 98
           KM S  T  LSL I L    +  I+G  F  P  TV I N + +    +T+HCKS +DDL
Sbjct: 41  KMSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDL 100

Query: 99  GVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKC--TTCTWI 158
           GVH L     Y+F FRPN  G+TLF+C+F WTG    ++FN++ D RD  KC  T C WI
Sbjct: 101 GVHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSS--HYFNIYQDLRDRAKCNDTLCLWI 160

Query: 159 IHEYSMCLQDPKNPGKEICYNY 177
           + E  +C+ D K    +ICY +
Sbjct: 161 VGEQGLCMFDYKTNAYDICYTW 180

[Close]
BLAST of CsaV3_4G030240 vs. TrEMBL
Match: tr|B9RWP2|B9RWP2_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1023130 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.3e-23
Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 0 

Query: 72  TVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 131
           TV+I N +  G+ ++VHCKSK DDLGVH+LP    Y F+F+PN  G T FFC FTW  + 
Sbjct: 133 TVIITNDLNQGLDLSVHCKSKEDDLGVHILPPHNNYQFEFQPNFWGVTQFFCGFTWK-KT 192

Query: 132 QIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKNPGKEICYNY 177
            I+WF+++   RD  KC+TC W++ +   C+ + K     +CY++
Sbjct: 193 GIHWFDIYIQNRDYPKCSTCKWVLRQKGPCMFEEKTNNYTLCYDW 236

[Close]
BLAST of CsaV3_4G030240 vs. TrEMBL
Match: tr|A0A218W404|A0A218W404_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr028440 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.3e-23
Identity = 59/135 (43.70%), Postives = 81/135 (60.00%), Query Frame = 0 

Query: 42  SSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVL 101
           S  +L L + +L L   C  + SIF +  T V+I N ++  + +TVHCKSK+DDLGVHV+
Sbjct: 4   SKSSLLLLVALLLLWGRC--ESSIFQKHKTHVLIRNDLQEQLDMTVHCKSKDDDLGVHVI 63

Query: 102 PLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMC 161
           P G  Y F FRPN   TTLF+C+F W G  + Y   V+D +RD  +C  CTW I   S C
Sbjct: 64  PPGGSYGFNFRPNFFCTTLFWCNFEWPGASRGY--KVYDCQRDYDRCFDCTWSIKSSSPC 123

Query: 162 LQDPKNPGKEICYNY 177
           L + K    ++C N+
Sbjct: 124 LYNAKTSQYDLCDNW 134

[Close]
BLAST of CsaV3_4G030240 vs. TrEMBL
Match: tr|A0A1S2Z508|A0A1S2Z508_CICAR (uncharacterized protein LOC101514770 OS=Cicer arietinum OX=3827 GN=LOC101514770 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.3e-21
Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = 0 

Query: 69  PVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWT 128
           PV           G+ +TVHCKSK++DLG+HVL  GQ Y FKFR NL G TLFFC F W 
Sbjct: 54  PVLNXXXXXXXXXGLKLTVHCKSKDNDLGIHVLVPGQSYGFKFRHNLFGETLFFCFFKW- 113

Query: 129 GQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKNPGKEICY 175
                +WF++++D+RD   C +C W I +   CL+DPK    +ICY
Sbjct: 114 -NDVTHWFDIYEDERDYATCKSCYWDIKQTGPCLKDPKG---DICY 154

The following BLAST results are available for this feature:
BLAST of CsaV3_4G030240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004515192.11.3e-2350.00PREDICTED: uncharacterized protein LOC101514444 [Cicer arietinum][more]
KGN61530.12.9e-2343.66hypothetical protein Csa_2G162130 [Cucumis sativus][more]
EEF44294.16.5e-2343.81conserved hypothetical protein [Ricinus communis][more]
OWM67577.11.1e-2243.70hypothetical protein CDL15_Pgr028440 [Punica granatum][more]
XP_010644710.12.1e-2140.58PREDICTED: uncharacterized protein LOC104877646 [Vitis vinifera][more]
BLAST of CsaV3_4G030240 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04645.11.5e-2150.00Plant self-incompatibility protein S1 family[more]
AT5G12070.14.3e-2142.34Plant self-incompatibility protein S1 family[more]
AT5G12060.12.4e-1939.81Plant self-incompatibility protein S1 family[more]
AT3G16970.19.0e-1937.50Plant self-incompatibility protein S1 family[more]
AT3G17080.11.1e-1633.10Plant self-incompatibility protein S1 family[more]
BLAST of CsaV3_4G030240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O23020|SPH5_ARATH2.7e-2050.00S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1[more]
sp|F4JZG1|SPH4_ARATH7.8e-2042.34S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1[more]
sp|Q9FMQ4|SPH3_ARATH4.3e-1839.81S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1[more]
sp|P0DN93|SPH29_ARATH1.6e-1733.58S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1[more]
sp|F4JLQ5|SPH2_ARATH6.4e-1435.34S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1[more]
BLAST of CsaV3_4G030240 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S2Z503|A0A1S2Z503_CICAR8.6e-2450.00uncharacterized protein LOC101514444 OS=Cicer arietinum OX=3827 GN=LOC101514444 ... [more]
tr|A0A0A0LI28|A0A0A0LI28_CUCSA1.9e-2343.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=4 SV=1[more]
tr|B9RWP2|B9RWP2_RICCO4.3e-2343.81Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1023130 PE=4 SV=1[more]
tr|A0A218W404|A0A218W404_PUNGR7.3e-2343.70Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr028440 PE=4 SV=1[more]
tr|A0A1S2Z508|A0A1S2Z508_CICAR2.3e-2147.17uncharacterized protein LOC101514770 OS=Cicer arietinum OX=3827 GN=LOC101514770 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G030240.1CsaV3_4G030240.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF05938Self-incomp_S1coord: 72..175
e-value: 2.4E-28
score: 98.6
IPR010264Plant self-incompatibility S1PANTHERPTHR31232FAMILY NOT NAMEDcoord: 49..178

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G030240Silver-seed gourdcarcucB0510
CsaV3_4G030240Silver-seed gourdcarcucB0551
CsaV3_4G030240Cucumber (Gy14) v2cgybcucB171
CsaV3_4G030240Cucurbita maxima (Rimu)cmacucB0793
CsaV3_4G030240Cucurbita maxima (Rimu)cmacucB1023
CsaV3_4G030240Cucurbita moschata (Rifu)cmocucB0784
CsaV3_4G030240Cucurbita moschata (Rifu)cmocucB1007
CsaV3_4G030240Cucurbita pepo (Zucchini)cpecucB0077
CsaV3_4G030240Cucurbita pepo (Zucchini)cpecucB0603
CsaV3_4G030240Wild cucumber (PI 183967)cpicucB212
CsaV3_4G030240Wild cucumber (PI 183967)cpicucB214
CsaV3_4G030240Bottle gourd (USVL1VR-Ls)cuclsiB274
CsaV3_4G030240Melon (DHL92) v3.5.1cucmeB336
CsaV3_4G030240Melon (DHL92) v3.6.1cucmedB329
CsaV3_4G030240Watermelon (Charleston Gray)cucwcgB319
CsaV3_4G030240Watermelon (97103) v1cucwmB357
CsaV3_4G030240Watermelon (97103) v2cucwmbB304
CsaV3_4G030240Watermelon (97103) v2cucwmbB308
CsaV3_4G030240Wax gourdcucwgoB398
CsaV3_4G030240Wax gourdcucwgoB418
CsaV3_4G030240Wax gourdcucwgoB419