CsaV3_4G029710 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G029710
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 19290744 .. 19290893 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCCGGGACTGGGAGCTGCGAGGTGAAGTCTACGAAGTGCCAATTGTCGAAGAAGGAGAAAGCCAAAGAAGGATGTGGGATGGGAGTCGAGTGTTGGCCATCGGTTGGCGAACAAGGCGGGACGGGAGTCTACTGGAATGGCTGA

mRNA sequence

ATGGGATCCGGGACTGGGAGCTGCGAGGTGAAGTCTACGAAGTGCCAATTGTCGAAGAAGGAGAAAGCCAAAGAAGGATGTGGGATGGGAGTCGAGTGTTGGCCATCGGTTGGCGAACAAGGCGGGACGGGAGTCTACTGGAATGGCTGA

Coding sequence (CDS)

ATGGGATCCGGGACTGGGAGCTGCGAGGTGAAGTCTACGAAGTGCCAATTGTCGAAGAAGGAGAAAGCCAAAGAAGGATGTGGGATGGGAGTCGAGTGTTGGCCATCGGTTGGCGAACAAGGCGGGACGGGAGTCTACTGGAATGGCTGA

Protein sequence

MGSGTGSCEVKSTKCQLSKKEKAKEGCGMGVECWPSVGEQGGTGVYWNG
Homology
[Close]
BLAST of CsaV3_4G029710 vs. NCBI nr
Match: KGN54721.1 (hypothetical protein Csa_4G433480 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 6.2e-21
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MGSGTGSCEVKSTKCQLSKKEKAKEGCGMGVECWPSVGEQGGTGVYWNG 50
          MGSGTGSCEVKSTKCQLSKKEKAKEGCGMGVECWPSVGEQGGTGVYWNG
Sbjct: 1  MGSGTGSCEVKSTKCQLSKKEKAKEGCGMGVECWPSVGEQGGTGVYWNG 49

[Close]
BLAST of CsaV3_4G029710 vs. TrEMBL
Match: tr|A0A0A0L3K3|A0A0A0L3K3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G433480 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.1e-21
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MGSGTGSCEVKSTKCQLSKKEKAKEGCGMGVECWPSVGEQGGTGVYWNG 50
          MGSGTGSCEVKSTKCQLSKKEKAKEGCGMGVECWPSVGEQGGTGVYWNG
Sbjct: 1  MGSGTGSCEVKSTKCQLSKKEKAKEGCGMGVECWPSVGEQGGTGVYWNG 49

The following BLAST results are available for this feature:
BLAST of CsaV3_4G029710 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54721.16.2e-21100.00hypothetical protein Csa_4G433480 [Cucumis sativus][more]
BLAST of CsaV3_4G029710 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029710 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L3K3|A0A0A0L3K3_CUCSA4.1e-21100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G433480 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G029710.1CsaV3_4G029710.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G029710CSPI04G19290Wild cucumber (PI 183967)cpicucB212
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G029710Cucumber (Gy14) v2cgybcucB171
CsaV3_4G029710Cucumber (Gy14) v1cgycucB065
CsaV3_4G029710Cucurbita maxima (Rimu)cmacucB0798
CsaV3_4G029710Cucurbita moschata (Rifu)cmocucB0775
CsaV3_4G029710Cucurbita pepo (Zucchini)cpecucB0078
CsaV3_4G029710Cucurbita pepo (Zucchini)cpecucB0087
CsaV3_4G029710Bottle gourd (USVL1VR-Ls)cuclsiB273
CsaV3_4G029710Melon (DHL92) v3.5.1cucmeB337
CsaV3_4G029710Melon (DHL92) v3.6.1cucmedB330
CsaV3_4G029710Wax gourdcucwgoB412