CsaV3_4G029110 (gene) Cucumber (Chinese Long) v3

NameCsaV3_4G029110
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionChaperone DnaK
Locationchr4 : 18631896 .. 18632145 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTTGAGGTTGGAGATGGTGTATTTGAGGTTCTTTCTACTTCAGGCGATACACATTTGGGTGGCAATGATTTTGACAAGGTTGAGTCACTCATTTTTCCTATAACTTCCATGTGTTTCTTTATTTGCAGAAAATGACATTTCTGCTTTATTACTTTCAGAGAATTGTCGGTTGGCTTGCTGAGAGCTTTAAGAGGGATGAAGGAGTAAACCTTTTGAAAGACAAACAGGCGCTGCAACGTCTAACCTAA

mRNA sequence

CTTGAGGTTGGAGATGGTGTATTTGAGGTTCTTTCTACTTCAGGCGATACACATTTGGGTGGCAATGATTTTGACAAGAGAATTGTCGGTTGGCTTGCTGAGAGCTTTAAGAGGGATGAAGGAGTAAACCTTTTGAAAGACAAACAGGCGCTGCAACGTCTAACCTA

Coding sequence (CDS)

CTTGAGGTTGGAGATGGTGTATTTGAGGTTCTTTCTACTTCAGGCGATACACATTTGGGTGGCAATGATTTTGACAAGAGAATTGTCGGTTGGCTTGCTGAGAGCTTTAAGAGGGATGAAGGAGTAAACCTTTTGAAAGACAAACAGGCGCTGCAACGTCTAACCTA

Protein sequence

LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLTX
BLAST of CsaV3_4G029110 vs. NCBI nr
Match: XP_008461924.1 (PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic-like [Cucumis melo])

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKRIV WLAESFKRDEG++LLKDKQALQRLT
Sbjct: 245 LEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLT 299

BLAST of CsaV3_4G029110 vs. NCBI nr
Match: KGN44489.1 (hypothetical protein Csa_7G312930 [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKRIV WLAESFKRDEG++LLKDKQALQRLT
Sbjct: 245 LEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLT 299

BLAST of CsaV3_4G029110 vs. NCBI nr
Match: XP_004139746.2 (PREDICTED: LOW QUALITY PROTEIN: stromal 70 kDa heat shock-related protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKRIV WLAESFKRDEG++LLKDKQALQRLT
Sbjct: 245 LEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLT 299

BLAST of CsaV3_4G029110 vs. NCBI nr
Match: XP_022038731.1 (stromal 70 kDa heat shock-related protein, chloroplastic-like [Helianthus annuus] >OTG25756.1 putative chaperone protein dnaK2 [Helianthus annuus])

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKRIV WLAESFKRDEG++LLKDKQALQRLT
Sbjct: 258 LEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLT 312

BLAST of CsaV3_4G029110 vs. NCBI nr
Match: PWA47516.1 (chaperone protein dnaK2 [Artemisia annua])

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKRIV WLAESFKRDEG++LLKDKQALQRLT
Sbjct: 259 LEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLT 313

BLAST of CsaV3_4G029110 vs. TAIR10
Match: AT5G49910.1 (chloroplast heat shock protein 70-2)

HSP 1 Score: 103.2 bits (256), Expect = 5.3e-23
Identity = 47/55 (85.45%), Postives = 53/55 (96.36%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKR+V WLA +FK+DEG++LLKDKQALQRLT
Sbjct: 280 LEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLASTFKKDEGIDLLKDKQALQRLT 334

BLAST of CsaV3_4G029110 vs. TAIR10
Match: AT4G24280.1 (chloroplast heat shock protein 70-1)

HSP 1 Score: 102.4 bits (254), Expect = 9.0e-23
Identity = 47/55 (85.45%), Postives = 52/55 (94.55%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKR+V WLA  FK+DEG++LLKDKQALQRLT
Sbjct: 280 LEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAAEFKKDEGIDLLKDKQALQRLT 334

BLAST of CsaV3_4G029110 vs. TAIR10
Match: AT5G09590.1 (mitochondrial HSO70 2)

HSP 1 Score: 67.0 bits (162), Expect = 4.2e-12
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRL 55
           LE+ +GVFEV +T+GDT LGG DFD  ++ +L   FK  EG++L KD+ ALQRL
Sbjct: 258 LEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKTTEGIDLAKDRLALQRL 311

BLAST of CsaV3_4G029110 vs. TAIR10
Match: AT4G37910.1 (mitochondrial heat shock protein 70-1)

HSP 1 Score: 65.1 bits (157), Expect = 1.6e-11
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRL 55
           LE+  GVFEV +T+GDT LGG DFD  ++ +L   FKR + ++L KD  ALQRL
Sbjct: 253 LEISSGVFEVKATNGDTFLGGEDFDNTLLEYLVNEFKRSDNIDLTKDNLALQRL 306

BLAST of CsaV3_4G029110 vs. TAIR10
Match: AT1G09080.1 (Heat shock protein 70 (Hsp 70) family protein)

HSP 1 Score: 59.3 bits (142), Expect = 8.7e-10
Identity = 27/54 (50.00%), Postives = 38/54 (70.37%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRL 55
           L + +GVFEVLSTSGDTHLGG DFD R++ +  +  K+    ++ KD +AL +L
Sbjct: 255 LTIDNGVFEVLSTSGDTHLGGEDFDHRVMDYFIKLVKKKYNKDISKDHKALGKL 308

BLAST of CsaV3_4G029110 vs. Swiss-Prot
Match: sp|Q08080|HSP7S_SPIOL (Stromal 70 kDa heat shock-related protein, chloroplastic (Fragment) OS=Spinacia oleracea OX=3562 GN=CHSP70 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.5e-22
Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKRIV WLA SFKRDEG++LLKDKQALQRLT
Sbjct: 150 LEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASSFKRDEGIDLLKDKQALQRLT 204

BLAST of CsaV3_4G029110 vs. Swiss-Prot
Match: sp|Q9LTX9|HSP7G_ARATH (Heat shock 70 kDa protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP70-7 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 9.5e-22
Identity = 47/55 (85.45%), Postives = 53/55 (96.36%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKR+V WLA +FK+DEG++LLKDKQALQRLT
Sbjct: 280 LEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLASTFKKDEGIDLLKDKQALQRLT 334

BLAST of CsaV3_4G029110 vs. Swiss-Prot
Match: sp|Q02028|HSP7S_PEA (Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum OX=3888 GN=HSP70 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 9.5e-22
Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKR+V WLA  FKRDEG++LLKDKQALQRLT
Sbjct: 270 LEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAGDFKRDEGIDLLKDKQALQRLT 324

BLAST of CsaV3_4G029110 vs. Swiss-Prot
Match: sp|Q9STW6|HSP7F_ARATH (Heat shock 70 kDa protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP70-6 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-21
Identity = 47/55 (85.45%), Postives = 52/55 (94.55%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKR+V WLA  FK+DEG++LLKDKQALQRLT
Sbjct: 280 LEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAAEFKKDEGIDLLKDKQALQRLT 334

BLAST of CsaV3_4G029110 vs. Swiss-Prot
Match: sp|Q8YW74|DNAK2_NOSS1 (Chaperone protein dnaK2 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=dnaK2 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.0e-19
Identity = 44/55 (80.00%), Postives = 52/55 (94.55%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVL+TSGDTHLGG+DFDK+IV +LAE F++DEG++L KDKQALQRLT
Sbjct: 203 LEVGDGVFEVLATSGDTHLGGDDFDKKIVDFLAEQFRKDEGIDLRKDKQALQRLT 257

BLAST of CsaV3_4G029110 vs. TrEMBL
Match: tr|A0A251USB3|A0A251USB3_HELAN (Putative chaperone protein dnaK2 OS=Helianthus annuus OX=4232 GN=DNAK2 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.8e-21
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKRIV WLAESFKRDEG++LLKDKQALQRLT
Sbjct: 258 LEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLT 312

BLAST of CsaV3_4G029110 vs. TrEMBL
Match: tr|A0A1S3CFU4|A0A1S3CFU4_CUCME (stromal 70 kDa heat shock-related protein, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103500413 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.8e-21
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKRIV WLAESFKRDEG++LLKDKQALQRLT
Sbjct: 245 LEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLT 299

BLAST of CsaV3_4G029110 vs. TrEMBL
Match: tr|A0A2U1LEU5|A0A2U1LEU5_ARTAN (Chaperone protein dnaK2 OS=Artemisia annua OX=35608 GN=CTI12_AA498570 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.8e-21
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKRIV WLAESFKRDEG++LLKDKQALQRLT
Sbjct: 259 LEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLT 313

BLAST of CsaV3_4G029110 vs. TrEMBL
Match: tr|A0A2U1LET4|A0A2U1LET4_ARTAN (Chaperone protein dnaK2 OS=Artemisia annua OX=35608 GN=CTI12_AA498570 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.8e-21
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKRIV WLAESFKRDEG++LLKDKQALQRLT
Sbjct: 259 LEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLT 313

BLAST of CsaV3_4G029110 vs. TrEMBL
Match: tr|A0A0A0K6G7|A0A0A0K6G7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G312930 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.8e-21
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0

Query: 1   LEVGDGVFEVLSTSGDTHLGGNDFDKRIVGWLAESFKRDEGVNLLKDKQALQRLT 56
           LEVGDGVFEVLSTSGDTHLGG+DFDKRIV WLAESFKRDEG++LLKDKQALQRLT
Sbjct: 245 LEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLT 299

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008461924.11.2e-2092.73PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic-like [Cucumi... [more]
KGN44489.11.2e-2092.73hypothetical protein Csa_7G312930 [Cucumis sativus][more]
XP_004139746.21.2e-2092.73PREDICTED: LOW QUALITY PROTEIN: stromal 70 kDa heat shock-related protein, chlor... [more]
XP_022038731.11.2e-2092.73stromal 70 kDa heat shock-related protein, chloroplastic-like [Helianthus annuus... [more]
PWA47516.11.2e-2092.73chaperone protein dnaK2 [Artemisia annua][more]
Match NameE-valueIdentityDescription
AT5G49910.15.3e-2385.45chloroplast heat shock protein 70-2[more]
AT4G24280.19.0e-2385.45chloroplast heat shock protein 70-1[more]
AT5G09590.14.2e-1255.56mitochondrial HSO70 2[more]
AT4G37910.11.6e-1153.70mitochondrial heat shock protein 70-1[more]
AT1G09080.18.7e-1050.00Heat shock protein 70 (Hsp 70) family protein[more]
Match NameE-valueIdentityDescription
sp|Q08080|HSP7S_SPIOL1.5e-2290.91Stromal 70 kDa heat shock-related protein, chloroplastic (Fragment) OS=Spinacia ... [more]
sp|Q9LTX9|HSP7G_ARATH9.5e-2285.45Heat shock 70 kDa protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HS... [more]
sp|Q02028|HSP7S_PEA9.5e-2287.27Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum OX=388... [more]
sp|Q9STW6|HSP7F_ARATH1.6e-2185.45Heat shock 70 kDa protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HS... [more]
sp|Q8YW74|DNAK2_NOSS12.0e-1980.00Chaperone protein dnaK2 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) ... [more]
Match NameE-valueIdentityDescription
tr|A0A251USB3|A0A251USB3_HELAN7.8e-2192.73Putative chaperone protein dnaK2 OS=Helianthus annuus OX=4232 GN=DNAK2 PE=3 SV=1[more]
tr|A0A1S3CFU4|A0A1S3CFU4_CUCME7.8e-2192.73stromal 70 kDa heat shock-related protein, chloroplastic-like OS=Cucumis melo OX... [more]
tr|A0A2U1LEU5|A0A2U1LEU5_ARTAN7.8e-2192.73Chaperone protein dnaK2 OS=Artemisia annua OX=35608 GN=CTI12_AA498570 PE=4 SV=1[more]
tr|A0A2U1LET4|A0A2U1LET4_ARTAN7.8e-2192.73Chaperone protein dnaK2 OS=Artemisia annua OX=35608 GN=CTI12_AA498570 PE=4 SV=1[more]
tr|A0A0A0K6G7|A0A0A0K6G7_CUCSA7.8e-2192.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G312930 PE=3 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013126Hsp_70_fam
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006457 protein folding
cellular_component GO:0005575 cellular_component
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G029110.1CsaV3_4G029110.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.420.40coord: 1..19
e-value: 1.3E-14
score: 56.1
NoneNo IPR availableGENE3DG3DSA:3.90.640.10coord: 20..55
e-value: 1.3E-14
score: 56.1
NoneNo IPR availablePANTHERPTHR19375:SF332SUBFAMILY NOT NAMEDcoord: 1..55
NoneNo IPR availableSUPERFAMILYSSF53067Actin-like ATPase domaincoord: 2..55
IPR013126Heat shock protein 70 familyPFAMPF00012HSP70coord: 1..55
e-value: 1.2E-18
score: 66.6
IPR013126Heat shock protein 70 familyPANTHERPTHR19375HEAT SHOCK PROTEIN 70KDAcoord: 1..55

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G029110CSPI04G18730Wild cucumber (PI 183967)cpicucB212
CsaV3_4G029110CsGy4G017800Cucumber (Gy14) v2cgybcucB171
The following gene(s) are paralogous to this gene:

None