CsaV3_4G027650 (gene) Cucumber (Chinese Long) v3

NameCsaV3_4G027650
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 16958511 .. 16958755 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATGGGGGATTTTGGAGAATTAGGGTTTTTCTTGGTTGTTCTTGCCGTCGATTGGAACATTTGTTTCTATCAGGGTTTGTTCTTCCGATGCTAAAGTTTGAGAATTTGGAGTTAGTCTTAGCAATCACTGCACTTCCTTTTCAGTATTTTTATTAATTAAAAGCTGAGGCATCTGATTCGTGTATCACTTCCATGAATTGCGGCTCCGAGACATTGCTTTATGGGAATAAAGAGTTCTAA

mRNA sequence

ATGGGGATGGGGGATTTTGGAGAATTAGGGTTTTTCTTGGTTGTTCTTGCCGTCGATTGGAACATTTGTTTCTATCAGGCTGAGGCATCTGATTCGTGTATCACTTCCATGAATTGCGGCTCCGAGACATTGCTTTATGGGAATAAAGAGTTCTAA

Coding sequence (CDS)

ATGGGGATGGGGGATTTTGGAGAATTAGGGTTTTTCTTGGTTGTTCTTGCCGTCGATTGGAACATTTGTTTCTATCAGGCTGAGGCATCTGATTCGTGTATCACTTCCATGAATTGCGGCTCCGAGACATTGCTTTATGGGAATAAAGAGTTCTAA

Protein sequence

MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF
BLAST of CsaV3_4G027650 vs. NCBI nr
Match: KGN54501.1 (hypothetical protein Csa_4G340520 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-22
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF 52
          MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF
Sbjct: 1  MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF 51

BLAST of CsaV3_4G027650 vs. TrEMBL
Match: tr|A0A0A0L335|A0A0A0L335_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G340520 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-22
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF 52
          MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF
Sbjct: 1  MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN54501.14.4e-22100.00hypothetical protein Csa_4G340520 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L335|A0A0A0L335_CUCSA2.9e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G340520 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G027650.1CsaV3_4G027650.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None