CsaV3_4G027570 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G027570
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionTransmembrane protein, putative
Locationchr4 : 16795055 .. 16801409 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCGCCTCCACCCTCATTTTCTTTTACTCTCTTTCTTCCTTCTGTCGTCTTTCCTTTCTCTCCTTCTCTGTCTTTTTCTTTTCTCTTCACTTCTTTCTTTTCTTTTCTCTCATATTTTCTTTTTCCTTTCTCTTCTCCTCTTTCCTTCTCTCTTTTCTTTTTCTATACCTCTCTATCTCCCTATACGGCAAGTTCTTAAAAGAAAAAAGGGAGACCGGCGGAGATGTTATAGTACGGCGGCGCGGAGACGACCAACAAGTAATCAAGATCTACGTTTTTGCGACAAGCAGCTTTGGTAACGATGGTCTCTTCGTTTTTTTATTGTTCGTTCTTATTACCTAAGATCTACGTGGTTTCTATTTGGGTTTTCCACTTTGTTTTTGTTTTGAAATCAAGAGTTGGAATGTGTTCAGCACTCTGGCCATCAAGTTTAAGGACCTTGGCCCCGCATTCATGTCAGTTTGGAACCTATTCAAACACGAACCAACAAGTAATTAAGCTTTTCTGGCCTTAATCAGCGGGCAATGATTTGTTTTCATGACTTTCAAACTCGTTTAAGTTCGGTTAGTTAGTCTCTAACCTTTGAAGTTCTTCCATTTCAGTTTTGAGCTAATACGTCAGCGAGAATGAGTTAATAAACCTCCTCAGTATCCTTTGGGTAAGGTAATAGCATTTACATTGAGTTTCAGAGTAATTTTGGTTTAAGTTCTTATTTATAAAATTTGATCCAAATTTTTGGATTGAATTGAAGTACCGAATCAGTTTCTAACCAATGGAGCCTTTATGCGTTTAGGTTGAACTGATTAGATCCATCTGAGTAACTTTTAGTTGTATAGTTAATTTTTGGATTGAATTGAAGTATTACCAAATCAGTTCCTAACCAATGGAGCCTATATGCGTTTAGGTTGAACTGATTAGATTGTTGATTTATGAGATGACAACTGGTAAGAGCTAGTTACTACTAGCTCTTGAATTACGTTTTAGAATTAGTAAGATTAAGTTTTGATTTCAGAAATTTTCTTTAGGTTGATTTGAGGAGATTTGATCGAGAGAAATTTTTATACTTTGGATTTCTAATCAGGTAAGTGGCTCTTGTGATGTATGACCTTAGGGCGAGTCATATATATGTTAACAATTATGTATTGATTATCCTTGAATTATGATGATTGAAATGTATGGTGAATGATGATGTATGTTGATTGACAATGTTTGCTGATTATGATGTGAATGCATGTATTGATAACACATATATGTGCATGGGACCCCATGCATGGATGTGATGACACATGCAAGATTGAAAATGTTTGTGGTAATTGGCACCCAATCAACAAAGTCGAGCCTCACCCTTCAGAAGCCCCTAAAATTGTGTATGTGTCATCACAGATGCACCTCAAGGGAGTGTAATTTTCAATTTTCATTTTAGAATTTGAGTCTTTTAGAGAGACAGAGGTGGCCTTGTTCCGAAGTGGACAAGAGGGTAGTTTCTCAATTCAATAAGACTTCCTTCAATATTTAGTGGATAGCCATCGGTCTGTTGTCTTAAACCTTTTGTTTCATTACCATTGTATTTTGAGCTACAATTTTTTTCTTTATATGAATAAAAAGTTCTTTTTTCTTTAAAACAAAAACCATAGTGCTGTTAATTATTAATAAATATGGGTTTTTTAGCATTGTTGTAACTTTTATTGCCCTTTTGGTCGGTCAATCATTTACATTTTGATTGAAATAGTTAGTGTTTTTCCTTTTTTCTCTTAATTTTATTACTGAAATTTAAATGGTTAGGCATTGATTTTAAGTTTCTTGAAATCCATATCTACCTATGTACTTTTATGATGATGTAGCCTATTCTTTTCATTTTTTATTGTCAGTGTTTTTCTTGTGGTTTCTTTTTTTGAATTTAGCCATGTGGAGTTGGGGATTGAACATCTAATCTTTAGATCAAATGTTTAACCTCTTAATGAGCTATGGACAGGCTGACTTTTTTCTTGTGATTTATAATATGGGAGGATTGTGTTAGCAGGGGGCTAGTGTGAACAAGCAACAAGGAAAGGGCTATAACAACCTTACTAGAATGAGCAATATGAGATGTCAACACTGTGCAGGCCCTCTTTCAAAGGATATGGTCTCGTGCCTTCTTCTGAGTTTTCTTCTATCGTCTTGGTCTACACAGTCTCACTTTAATCTGTAATTTGTTGTATATTACAGGAAACAAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGCTTCTCTATGGTATTATTCCTTTTTCTTATGGAACCTTGCCTTAGAAAATTGTATATTGCTCTTCTGTTATTTACTCTTCGAGTATAGACCATTTAGAAAATTGTATATTGCCTTAATCTTGTTTCCTTTCGTGTTGTACTTACCTGTGCATGCTCGTGATACCTCACTTTATTGTTGTGATGTTATCTACTTCTTGTAGATTAGCTCTGCTGTTGGCGGTATTGCTAGTGCTTTCTATGGATTTAACAATGGTAATATACACCTTCCCTTTCAAATTTCAATAAATCCAACAATTACAATACAAGCTATTATCCAAATGGCCTACTAAATTACATAATCAACACTAAACAATCCTACGTACTCTACTATATTCTGTTGTGTTCTTTTATATCTTAAATAGCTCATCTTTTATTGCCATTGCAGTGATGCCTGTTGTCCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTGTAAGTACCTTTCTGCTTTCCAATTTGGGATGCTTGTGAACTGTTGCAAAATCTTTCTTCAGCTTAGTGTTTTTTAAATCTCAAGGGGCGATGCACAATAGTCTTCTAGGGCTTAAGCACTTGACGCAAAAAGATCTTTTTTAAAAGGTGCACTGCATATAAAAGTACTACATTTAGAAAACGGCTGATTGGAAAAGGGAACAAAAACCCATGGTTTTTTTTCTTTTAGAAAACGGAAATGCCACAAATAAAATTATCCAAATTGGACCAACATGAACGAAATGAAATTGTGTGAGCCCACAGAGTTTAACAAGGCAACATAAACAAACCCACATAAAAAAATCATGGGCTTTTGTTATAGATCTCTATATGAGGATCTATGTTTCTATTCCAGGAGTTCTTGGTCACATTCTCTGTGGGTTTGTGTTTCTAGCCTAGAAGTTCTTGTTTTCGTTCTTCTTGGGTTTTTGGTCCTATCTCATATCTGCTGATTTGATTCGAATGTTTTCTTTACAAACTCAAGTTGTTTGTCGTTCTACCACCTTGAGTTTGAGGGAGGGTGTTAAAGAAAAATAAAGTTTATTCTTATTTAATATTTCCATATTTGTATTTTTCCTTTATTAGTATTTTTGGTCTCTATTTGTTCACCAATGTAATAGGTTACTTTGATCGATCCAATATATTATATAAAATTATCAGTTTTTTGCTTATTAGAAGCTGAGTACCGCTATAGACTTCCAAAATGAATAGGCAGCCTTTTGATTTCCACGAGCGGGTGCATCAAGTAAGGGAGATGTGGAGGACCAAATATAATATCCATCTTTTTCTTATGCTGTTTGCTGCCTGATCTGTTGCTACATGCCTTCTAAGATCCTAACATTAGTTGGTGCTTTCCAAATAGCAGTGGATGATTTTTCCAGCTCATCTCTGGCACTCTTTCTCATGGCCAAGTGGGGTATTCTTTTTGGAGGTGTAATAAAGGACCTTCCAATGGCAGTTAGTTGCATAGAAGTTTTATTAGGATATCTGTTTCATCCCTGACTTGGCGGGGGATATCTGACTTTCTCTTCTTTTGATAATGAAATTCCAGTTCTTGTAAGGAAAAATGAAAGGTTCTATTTACTAGAGTTCATTCCCCAAAATAAATATTGTGTCAGATCTTGTTCTACATTCTACCTTCTATTTATAGGTAATTACGGAGTCCATTGAACAAATGCCAATTTTGTGTTAGGTTTGAGAAAAACAAGAGGATTTTAAGAAAAGTGGAGATGTCTTGGGGAAGGTTTGGTCTTTCAATTGGGTTTACCTTTGTTTATTGATTTGATAATAGAACTGGCAAGCTAATGTTCGTTATGACCCAACCAAGGATTAAAATATCTAATGGCGGTATTGATATCAAGATTTCAATTTTATAGATGTATCAATAAAATATCTATATCAACGGATATTTCTGTTATTCAAAATTTTGAAAATGTGTAGATTAATATTAAGTTGTTTTTACCCTTTAATCAAGTTATAGATATTGTTATTGGTATTTCTATTTATGTTATATTAAACAGATGACAATTTTTATGTTTTTTGAGCATTTATAAAAGATATTAAAGATATTTGCGGATATTTAATATTGATATCGAACTCTTCAATTTACGGATATTTTCATCCTATTGATGGATATTTACATTCTTGGACCCAACCTACGGCTTTTGGATTGGTAATATGGATTGTGCTTCACTGGATAGCTAATTAGGAAAGAAGTATGCTTGAGAGATTTAAAGCAGTCGTATAGAGCGAGGGTCTATGGAGGACTGTTTTTGTTTTTATTTGTTGTAATTTTTACTATTTACGGATGATTATGTGCTATTATTGCGTGTAATGTCTAGTCTTTACTGTCTTACTCATTTCATATTTGTAATGTCTTTTTTCCTATATGAGAATATGAGAATTAATTTTTGCATATTGAATTATTAAAACGATATTAATCTGTTTATTTTGTTGTTTCTTGGGTCATCTAGATGAAGAGAAATAATAAGATCTTTATAGACACGAGGAATGTAGAGTGGGAGGAAGTTTGGTCCTTAAATTTAACACCTTGCTTTGGGCTTGTGTCGAAGAATTTATTTATTATTTTTTTAGATCTTACTCTCTTGGATTTAGCCGTTTTCTTCTCTGCAAGGCTAGTCTCTGTTTGTTACCCTTTTCCCCCTACTGAGAACTTTTTCTTGAAAAAGAACATAAAATGCTGGTGTACATAGGGTGCAAGTACAGCTTCTTGAGATGAATTTCATGTTTTAGTCCTCTTGATTGGAAACATTTAATCTCACTTGCAGGCTCCTCCTGTGATTGTATTTTCTTCGGCTTGTGCAGGAATGACAGGTTAGTTATTTTGTTGTTATTTAATATTTAATAATTGGAGCTGGCTTTTTTTTTCTTTATCCAAAATGTTTTATATAGTATGGTATGGCAAATTGAGTACTTTACTTCTTTAGGATGGAGTAGTAGTGAGGCGCAATTCCATTTTGTTTAGCATTGGTAATAGGAACACATCATGAGTAAATTACCTTTGAAATAACTTTGATAGAAATTATTTGTGATATTTTCATTTGAAGATGATATTAAGTACAAAAATTGTTACTAAATGGTTGGTTACAGGTGGTGCGGTTCCAGCTTTGGCCCAACTTGTTTCTTCATCTTATCATTCATTAACATCGTCTTCAGAGGATGATAAGGCTCAGGATTCAAGATCTTCTTCTTCCTTGTAGTGGTAATGTATATAGTGGGGATTCTTATAGTATAGGTTTATACATACATATCTTATATTCCGCTTGAGGATAAGACAAAAGTTTTTATTTATTTATTTATGTGTGCTACATTCATTTTTGTTCTGAGCTACACGATCTCGAGCTGTGAGTTTTTTTCTTTCAATTTTGATAATGTCTCTCTTTAGGTTTTGGCCTCTTAAAATGAAATGCATGGTTCTCGTTATAGGGGAGGAGTATCCTTTAGATATATATAGGACTTCTAAAACACTTGGGAATCCTAGTCCTAGATAGACTTGAGTTATTGGTGAGTGGGGCCAATGTAATATAAAACAAGTGCATTTCAAGTATAGAGAACTTATAAGGAACAATTCATAATTCATAGGCTTCGAAAGATTTGGTTGGGGTTTTGTTTTGTAAACAATGAAATTGAGAAGAAATCAAATGATTAGAGAGAAGGAAATTCAAAGTGGTTTCCGTTTCCGCCTTCGTGAATTGAACATATCCTAGTGCATGTGGCTCTCTATGCACCTGTAACTCACTCTTGTAAGCACGTTGTGAAGACCTTTTATGCTCAGGACCACAACCCGAAGGCTTTCATATACTTTGAATTCTCAAAGAAAACTTGGTTTGTAATAACGAGAGGATAGAAAAGTGACTTGCCTTGTTAAATTCAATGAGAAGTCTAGGGCTAAGAATAAAAGCTTAGCAACCAAGATAAGTCTAGGGCTAATAAGAGCTTAGTTAAACTACCCCTTGACATCCAAGATAAGTCTAGGGCCAATAAGAGCTTAGTTAAACTACCACTTGACATGTACTTGGTTTGTACTTAGAACCAAGAAGTTTTAAGTTCTACTCTCAACTTCTATT

mRNA sequence

ATGAGCAATATGAGATGTCAACACTGTGCAGGCCCTCTTTCAAAGGATATGGAAACAAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGCTTCTCTATGATTAGCTCTGCTGTTGGCGGTATTGCTAGTGCTTTCTATGGATTTAACAATGTGATGCCTGTTGTCCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTGCTCCTCCTGTGATTGTATTTTCTTCGGCTTGTGCAGGAATGACAGGTGGTGCGGTTCCAGCTTTGGCCCAACTTGTTTCTTCATCTTATCATTCATTAACATCGTCTTCAGAGGATGATAAGGCTCAGGATTCAAGATCTTCTTCTTCCTTGTAG

Coding sequence (CDS)

ATGAGCAATATGAGATGTCAACACTGTGCAGGCCCTCTTTCAAAGGATATGGAAACAAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGCTTCTCTATGATTAGCTCTGCTGTTGGCGGTATTGCTAGTGCTTTCTATGGATTTAACAATGTGATGCCTGTTGTCCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTGCTCCTCCTGTGATTGTATTTTCTTCGGCTTGTGCAGGAATGACAGGTGGTGCGGTTCCAGCTTTGGCCCAACTTGTTTCTTCATCTTATCATTCATTAACATCGTCTTCAGAGGATGATAAGGCTCAGGATTCAAGATCTTCTTCTTCCTTGTAG

Protein sequence

MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSSSL
Homology
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BLAST of CsaV3_4G027570 vs. NCBI nr
Match: KGN54489.1 (hypothetical protein Csa_4G338930 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 9.7e-60
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV
Sbjct: 175 MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 234

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVI+FSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS
Sbjct: 235 KGPMWLHFLIGAPPVIIFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 294

Query: 121 SL 123
           SL
Sbjct: 295 SL 296

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BLAST of CsaV3_4G027570 vs. NCBI nr
Match: XP_011653746.1 (PREDICTED: uncharacterized protein LOC101207007 [Cucumis sativus] >XP_011653747.1 PREDICTED: uncharacterized protein LOC101207007 [Cucumis sativus] >XP_011653748.1 PREDICTED: uncharacterized protein LOC101207007 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 9.7e-60
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV
Sbjct: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVI+FSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS
Sbjct: 61  KGPMWLHFLIGAPPVIIFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120

Query: 121 SL 123
           SL
Sbjct: 121 SL 122

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BLAST of CsaV3_4G027570 vs. NCBI nr
Match: XP_011658376.1 (PREDICTED: uncharacterized protein LOC105435977 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 4.5e-57
Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFNNVMPVVQRSV
Sbjct: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSV 60

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVI+FSSACAGMTGGAVPALAQLV+SSYHSLTSSSEDDK QDSRSSS
Sbjct: 61  KGPMWLHFLIGAPPVIIFSSACAGMTGGAVPALAQLVASSYHSLTSSSEDDKTQDSRSSS 120

[Close]
BLAST of CsaV3_4G027570 vs. NCBI nr
Match: XP_008455891.1 (PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_008455892.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_008455893.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_016901867.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_016901868.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_016901869.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_016901870.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_016901872.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo])

HSP 1 Score: 226.9 bits (577), Expect = 3.8e-56
Identity = 114/122 (93.44%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFN VMPVVQRSV
Sbjct: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNTVMPVVQRSV 60

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLV+SSYHSLTSSS+DDK++DSRSSS
Sbjct: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSYHSLTSSSKDDKSRDSRSSS 120

Query: 121 SL 123
           +L
Sbjct: 121 TL 122

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BLAST of CsaV3_4G027570 vs. NCBI nr
Match: XP_022925022.1 (uncharacterized protein LOC111432392 [Cucurbita moschata] >XP_023517210.1 uncharacterized protein LOC111781045 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.9 bits (546), Expect = 1.5e-52
Identity = 108/121 (89.26%), Postives = 112/121 (92.56%), Query Frame = 0 

Query: 2   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVK 61
           SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFN+VMPVVQRSVK
Sbjct: 32  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVK 91

Query: 62  GPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSSS 121
           GPMWLHFLIGAPPVIVFSSACAGM GGAVPALAQL SSSYHS  S S+DDK  DSRSSS+
Sbjct: 92  GPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSST 151

Query: 122 L 123
           +
Sbjct: 152 M 152

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BLAST of CsaV3_4G027570 vs. TAIR10
Match: AT3G04040.1 (unknown protein)

HSP 1 Score: 167.9 bits (424), Expect = 3.8e-42
Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 0 

Query: 5   RCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVKGPM 64
           RC HCAGPL+K++ET+ WT+ P IRDSFSMI SAVGG ASAF GF++VMP+V++ +KGPM
Sbjct: 15  RCHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPM 74

Query: 65  WLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQD 116
           WLHFL+GAPPVIV SSACAG+ GGAVPALAQL SSSYH+   SS+  + QD
Sbjct: 75  WLHFLVGAPPVIVVSSACAGLAGGAVPALAQLASSSYHAAVHSSQPPQGQD 125

[Close]
BLAST of CsaV3_4G027570 vs. TAIR10
Match: AT5G18250.1 (unknown protein)

HSP 1 Score: 163.7 bits (413), Expect = 7.2e-41
Identity = 76/111 (68.47%), Postives = 92/111 (82.88%), Query Frame = 0 

Query: 4   MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVKGP 63
           +RC HCAGPL++++ETS WT+ P IRDSFSMI SAVGG ASAF GFN+ MP+V++ +KGP
Sbjct: 10  IRCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGP 69

Query: 64  MWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQ 115
           MWLHFL+GAPPVIV SSACAG+ GG VPALAQL SSSY +   SS+  +AQ
Sbjct: 70  MWLHFLVGAPPVIVLSSACAGLAGGTVPALAQLASSSYRAAVHSSQPPQAQ 120

[Close]
BLAST of CsaV3_4G027570 vs. TAIR10
Match: AT2G41945.3 (unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 5.0e-10
Identity = 40/146 (27.40%), Postives = 65/146 (44.52%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           + + RC  C   L+ + E   WTI P++ D+ ++  S +GG+ SA + FN  +P +Q   
Sbjct: 26  LGSARCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRF 85

Query: 61  KGPMWLHFLIGAPPVIVFS------------------------SACAG------------ 109
            G   L FL+G P ++V+S                        S CA             
Sbjct: 86  SGSKRLSFLVGVPLLLVYSGVGAAFGESLQAAISFPIVWLEYESRCAAQCRIATFTFSLL 145

[Close]
BLAST of CsaV3_4G027570 vs. TrEMBL
Match: tr|A0A0A0L0B0|A0A0A0L0B0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338930 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 6.4e-60
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV
Sbjct: 175 MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 234

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVI+FSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS
Sbjct: 235 KGPMWLHFLIGAPPVIIFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 294

Query: 121 SL 123
           SL
Sbjct: 295 SL 296

[Close]
BLAST of CsaV3_4G027570 vs. TrEMBL
Match: tr|A0A1S4E0V5|A0A1S4E0V5_CUCME (uncharacterized protein LOC103495968 OS=Cucumis melo OX=3656 GN=LOC103495968 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.5e-56
Identity = 114/122 (93.44%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFN VMPVVQRSV
Sbjct: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNTVMPVVQRSV 60

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLV+SSYHSLTSSS+DDK++DSRSSS
Sbjct: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSYHSLTSSSKDDKSRDSRSSS 120

Query: 121 SL 123
           +L
Sbjct: 121 TL 122

[Close]
BLAST of CsaV3_4G027570 vs. TrEMBL
Match: tr|V7AGM4|V7AGM4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G094200g PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.3e-46
Identity = 97/122 (79.51%), Postives = 108/122 (88.52%), Query Frame = 0 

Query: 3   NMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVKG 62
           N++C HCAGPLSK+MET  WT+ PL+RDSFSMI SAVGG ASAFYGFN+VMPVV+RSVKG
Sbjct: 13  NIQCHHCAGPLSKNMETRNWTVSPLVRDSFSMIGSAVGGTASAFYGFNHVMPVVRRSVKG 72

Query: 63  PMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSS--SEDDKAQDSRSSS 122
           PMWLHFLIG PPVIVFSSACAG+ GGAVPALAQLVSSSYH+  SS  SEDDK Q SR+SS
Sbjct: 73  PMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAAVSSPPSEDDKIQKSRTSS 132

[Close]
BLAST of CsaV3_4G027570 vs. TrEMBL
Match: tr|A0A151TNV5|A0A151TNV5_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_022373 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.9e-46
Identity = 95/124 (76.61%), Postives = 109/124 (87.90%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           + N+RC HCAGPLSKDMETS WT+PPL+RDSFSMI SAVGG  SAFYGFN+VMPVV+R +
Sbjct: 11  IKNIRCHHCAGPLSKDMETSNWTVPPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCI 70

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSS--SEDDKAQDSRS 120
           KGPMWLHFL+G PPVIVFSSACAG+ GGAVPALAQLVSSSY++  S+  SEDDK Q SR+
Sbjct: 71  KGPMWLHFLVGTPPVIVFSSACAGVAGGAVPALAQLVSSSYNAALSTPPSEDDKIQKSRT 130

Query: 121 SSSL 123
           SS+L
Sbjct: 131 SSAL 134

[Close]
BLAST of CsaV3_4G027570 vs. TrEMBL
Match: tr|A0A2P4LSU9|A0A2P4LSU9_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_66379 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-45
Identity = 96/126 (76.19%), Postives = 107/126 (84.92%), Query Frame = 0 

Query: 3   NMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVKG 62
           +MRC HCAGPLSKDMETS WT+PPLIRDSFSMI SAVGG  SAFYGFN+VMP V+R VKG
Sbjct: 10  DMRCHHCAGPLSKDMETSEWTVPPLIRDSFSMIGSAVGGTTSAFYGFNHVMPKVRRCVKG 69

Query: 63  PMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSS------SEDDKAQDS 122
           PMWLHFLIGAPPVIVFSSACAG+ GGAVPA+AQL SSSYH++ SS      S+DDK   S
Sbjct: 70  PMWLHFLIGAPPVIVFSSACAGLAGGAVPAIAQLASSSYHAVVSSPSVPAPSQDDKMHKS 129

The following BLAST results are available for this feature:
BLAST of CsaV3_4G027570 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54489.19.7e-6099.18hypothetical protein Csa_4G338930 [Cucumis sativus][more]
XP_011653746.19.7e-6099.18PREDICTED: uncharacterized protein LOC101207007 [Cucumis sativus] >XP_011653747.... [more]
XP_011658376.14.5e-5795.83PREDICTED: uncharacterized protein LOC105435977 [Cucumis sativus][more]
XP_008455891.13.8e-5693.44PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_008455892.1 P... [more]
XP_022925022.11.5e-5289.26uncharacterized protein LOC111432392 [Cucurbita moschata] >XP_023517210.1 unchar... [more]
BLAST of CsaV3_4G027570 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04040.13.8e-4270.27unknown protein[more]
AT5G18250.17.2e-4168.47unknown protein[more]
AT2G41945.35.0e-1027.40unknown protein[more]
BLAST of CsaV3_4G027570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G027570 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L0B0|A0A0A0L0B0_CUCSA6.4e-6099.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338930 PE=4 SV=1[more]
tr|A0A1S4E0V5|A0A1S4E0V5_CUCME2.5e-5693.44uncharacterized protein LOC103495968 OS=Cucumis melo OX=3656 GN=LOC103495968 PE=... [more]
tr|V7AGM4|V7AGM4_PHAVU5.3e-4679.51Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G094200g PE=4 ... [more]
tr|A0A151TNV5|A0A151TNV5_CAJCA6.9e-4676.61Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_022373 PE=4 SV=1[more]
tr|A0A2P4LSU9|A0A2P4LSU9_QUESU1.5e-4576.19Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_66379 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G027570.1CsaV3_4G027570.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..122
NoneNo IPR availablePANTHERPTHR34459:SF1SUBFAMILY NOT NAMEDcoord: 2..115
NoneNo IPR availablePANTHERPTHR34459FAMILY NOT NAMEDcoord: 2..115

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G027570CSPI04G17010Wild cucumber (PI 183967)cpicucB212
CsaV3_4G027570Cucsa.017940Cucumber (Gy14) v1cgycucB405
CsaV3_4G027570CsGy4G016290Cucumber (Gy14) v2cgybcucB171
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G027570Silver-seed gourdcarcucB0511
CsaV3_4G027570Silver-seed gourdcarcucB0562
CsaV3_4G027570Cucurbita maxima (Rimu)cmacucB0803
CsaV3_4G027570Cucurbita maxima (Rimu)cmacucB1027
CsaV3_4G027570Cucurbita moschata (Rifu)cmocucB0788
CsaV3_4G027570Cucurbita moschata (Rifu)cmocucB1011
CsaV3_4G027570Cucurbita pepo (Zucchini)cpecucB0082
CsaV3_4G027570Cucurbita pepo (Zucchini)cpecucB0606
CsaV3_4G027570Watermelon (97103) v1cucwmB361