CsaV3_4G027080 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAAAGAAATAAAGAAATAAAGAAAAGGGATGCCACGTGGACCCCACGGTTTTGCCTTTATCCCCACTTTTTCTTCAAGGGGTGGGTCCCTTTCTCTCTCCCCACAGCTCTAAAACCTTTCTTTTATTTCTCTCCCCGCCGACTCTGCAGCTCACACCTAAAACACACACACACATAGAGAGAGAGAGACTATCAATATTCTTTCATACACTAAACATTTTCCGATGAGAAATCACAAGTTCCGTTTCTCCGACATGATTCCCAACGCCTGGTTTTACAAACTCAAAGAAATTGGCGGCGCCTCCAGACCTAAATCTTTCCGTTCCAACAAAAACCCTCACGCCCACCCACCTCCACCACCCCCTCCCTCCAAACACAAACAACAACCACCCCCACCCCCTCCTCCCCCTCACTCTCGTTCTAGAAAATCTTACTATTTCACTAGACAACTCCAATCCAACGATGCCTACTTCATCAATTCCCCTCCACCCTCGCCCCCCCTTCTACCTGTACCAATCCCCCCGAGAAAGTCAACAAAACAACCCAAACCAGGAAGAAAACAAACCAGTTCCCGGTCCTCCGCCAAGCTCCTCAGCTCCTCCTCCCTCGCCTGCAGCTGCCACACAACTGCTGAATCCATCTGGACAAAATCCGATTCTCCTCCACAATTTTCCACTTCACCCTCCGACACCTCCCCCGATTTCCGAACTGACAAAATCCTCACTGCAGAAGCATCCGAACACTTCGAGCACGACATCGTAATCGACGTATCGTCCAATTACTCCAACAATGCCGTCATCGGCGCTTTTGACGAACTGGAACTCCCCCCGATCATCACGAAACAGAAGAAGAAAACAGAGACAAAACAGAGAACGACGACGACTACGACGACAGGAACAAAGAAAGTTGCGGGGAATTCCCCGGGCGTACGGCTGCGGATTCACTCCCCGAAAATTGGGTACCGGAAAATGGGAGGGAGGAAAAGCGTGTCGTCACGGCGGAGCTTGTCGGAGAGTTTAGCGATAATGAAATCATCGTACGATCCACAAAAGGACTTCAGAGAATCGATGGTGGAGATGATTGTTGAGAATAACATTAGGAGTTCGAAGGAATTGGAAGATCTTCTTGCATGTTATCTGTGTTTGAACGCCGATGAATATCATGATCTTATTATCAAAGTTTTTAAGCAGATCTGGTTTGATCTTACACAACCTTCTCCTCCACCACTTTGATTTTGATCTTCTCTTTTTTTTCTTCTTTTTTTTTTTTTTTTCTTTCTTCTCCCTCCCATTTTGTAATTCTCTTTTGTACAGTTCTTCTTCTTCTCTAATTTCTAAACATAATCTTAATAAAAAAATTTACCTTTCATTCTCTTTTTATTTTTTGTTCTGTGAAATGTGAATTAATTGATTGGAGTTTTTGTTTTGTTTGGGGGAAGAACAGAGAGATTTGCTGTGCTTTACTTCAACTTGTCTCAATTTGTTTTGATCCTTTGTAGCCATTCTGTTTTTCTTTTTGTTTTAAATAAAATTTATGATTCTTATATTTATTAAGAAATATTGAATTTTAAGTCACAATCATGTTATCGAGAATTATTTAAGACTTAGAATTTAGTTTGTTTGGTAAAACACTTATAAAAGGGTTGATTGATAACTTAGGAACTATTTTATGATAAGTTGAGATTTTATCAAATCCTTAAAACTAAATTTTCATGTTTGTAGTTCATCTTACTTTGTAGTAAAAATCCATTACAATATTTATAAGCTTCATTTTAAAAAAATATAAATTTAAAAGAAATCAAATAGTTGTTAAAGGAAACTACAATCCTCCACTTTTGTTCAACCTAAAGAAAAAGAGGAAAAAAG ATGAGAAATCACAAGTTCCGTTTCTCCGACATGATTCCCAACGCCTGGTTTTACAAACTCAAAGAAATTGGCGGCGCCTCCAGACCTAAATCTTTCCGTTCCAACAAAAACCCTCACGCCCACCCACCTCCACCACCCCCTCCCTCCAAACACAAACAACAACCACCCCCACCCCCTCCTCCCCCTCACTCTCGTTCTAGAAAATCTTACTATTTCACTAGACAACTCCAATCCAACGATGCCTACTTCATCAATTCCCCTCCACCCTCGCCCCCCCTTCTACCTGTACCAATCCCCCCGAGAAAGTCAACAAAACAACCCAAACCAGGAAGAAAACAAACCAGTTCCCGGTCCTCCGCCAAGCTCCTCAGCTCCTCCTCCCTCGCCTGCAGCTGCCACACAACTGCTGAATCCATCTGGACAAAATCCGATTCTCCTCCACAATTTTCCACTTCACCCTCCGACACCTCCCCCGATTTCCGAACTGACAAAATCCTCACTGCAGAAGCATCCGAACACTTCGAGCACGACATCGTAATCGACGTATCGTCCAATTACTCCAACAATGCCGTCATCGGCGCTTTTGACGAACTGGAACTCCCCCCGATCATCACGAAACAGAAGAAGAAAACAGAGACAAAACAGAGAACGACGACGACTACGACGACAGGAACAAAGAAAGTTGCGGGGAATTCCCCGGGCGTACGGCTGCGGATTCACTCCCCGAAAATTGGGTACCGGAAAATGGGAGGGAGGAAAAGCGTGTCGTCACGGCGGAGCTTGTCGGAGAGTTTAGCGATAATGAAATCATCGTACGATCCACAAAAGGACTTCAGAGAATCGATGGTGGAGATGATTGTTGAGAATAACATTAGGAGTTCGAAGGAATTGGAAGATCTTCTTGCATGTTATCTGTGTTTGAACGCCGATGAATATCATGATCTTATTATCAAAGTTTTTAAGCAGATCTGGTTTGATCTTACACAACCTTCTCCTCCACCACTTTGA ATGAGAAATCACAAGTTCCGTTTCTCCGACATGATTCCCAACGCCTGGTTTTACAAACTCAAAGAAATTGGCGGCGCCTCCAGACCTAAATCTTTCCGTTCCAACAAAAACCCTCACGCCCACCCACCTCCACCACCCCCTCCCTCCAAACACAAACAACAACCACCCCCACCCCCTCCTCCCCCTCACTCTCGTTCTAGAAAATCTTACTATTTCACTAGACAACTCCAATCCAACGATGCCTACTTCATCAATTCCCCTCCACCCTCGCCCCCCCTTCTACCTGTACCAATCCCCCCGAGAAAGTCAACAAAACAACCCAAACCAGGAAGAAAACAAACCAGTTCCCGGTCCTCCGCCAAGCTCCTCAGCTCCTCCTCCCTCGCCTGCAGCTGCCACACAACTGCTGAATCCATCTGGACAAAATCCGATTCTCCTCCACAATTTTCCACTTCACCCTCCGACACCTCCCCCGATTTCCGAACTGACAAAATCCTCACTGCAGAAGCATCCGAACACTTCGAGCACGACATCGTAATCGACGTATCGTCCAATTACTCCAACAATGCCGTCATCGGCGCTTTTGACGAACTGGAACTCCCCCCGATCATCACGAAACAGAAGAAGAAAACAGAGACAAAACAGAGAACGACGACGACTACGACGACAGGAACAAAGAAAGTTGCGGGGAATTCCCCGGGCGTACGGCTGCGGATTCACTCCCCGAAAATTGGGTACCGGAAAATGGGAGGGAGGAAAAGCGTGTCGTCACGGCGGAGCTTGTCGGAGAGTTTAGCGATAATGAAATCATCGTACGATCCACAAAAGGACTTCAGAGAATCGATGGTGGAGATGATTGTTGAGAATAACATTAGGAGTTCGAAGGAATTGGAAGATCTTCTTGCATGTTATCTGTGTTTGAACGCCGATGAATATCATGATCTTATTATCAAAGTTTTTAAGCAGATCTGGTTTGATCTTACACAACCTTCTCCTCCACCACTTTGA MRNHKFRFSDMIPNAWFYKLKEIGGASRPKSFRSNKNPHAHPPPPPPPSKHKQQPPPPPPPPHSRSRKSYYFTRQLQSNDAYFINSPPPSPPLLPVPIPPRKSTKQPKPGRKQTSSRSSAKLLSSSSLACSCHTTAESIWTKSDSPPQFSTSPSDTSPDFRTDKILTAEASEHFEHDIVIDVSSNYSNNAVIGAFDELELPPIITKQKKKTETKQRTTTTTTTGTKKVAGNSPGVRLRIHSPKIGYRKMGGRKSVSSRRSLSESLAIMKSSYDPQKDFRESMVEMIVENNIRSSKELEDLLACYLCLNADEYHDLIIKVFKQIWFDLTQPSPPPL
BLAST of CsaV3_4G027080 vs. NCBI nr
Match: XP_011653718.1 (PREDICTED: transcription repressor OFP1 [Cucumis sativus] >KGN54443.1 hypothetical protein Csa_4G332100 [Cucumis sativus]) HSP 1 Score: 415.6 bits (1067), Expect = 1.6e-112 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. NCBI nr
Match: XP_016903000.1 (PREDICTED: transcription repressor OFP1 [Cucumis melo]) HSP 1 Score: 392.9 bits (1008), Expect = 1.1e-105 Identity = 300/335 (89.55%), Postives = 303/335 (90.45%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. NCBI nr
Match: XP_022978221.1 (transcription repressor OFP1-like [Cucurbita maxima]) HSP 1 Score: 283.5 bits (724), Expect = 9.4e-73 Identity = 221/340 (65.00%), Postives = 239/340 (70.29%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. NCBI nr
Match: XP_022950425.1 (transcription repressor OFP1-like [Cucurbita moschata]) HSP 1 Score: 282.0 bits (720), Expect = 2.7e-72 Identity = 222/333 (66.67%), Postives = 238/333 (71.47%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. NCBI nr
Match: XP_023544718.1 (transcription repressor OFP1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271.2 bits (692), Expect = 4.8e-69 Identity = 222/340 (65.29%), Postives = 240/340 (70.59%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. TAIR10
Match: AT5G01840.1 (ovate family protein 1) HSP 1 Score: 128.3 bits (321), Expect = 9.2e-30 Identity = 81/177 (45.76%), Postives = 100/177 (56.50%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. TAIR10
Match: AT2G30400.1 (ovate family protein 2) HSP 1 Score: 114.8 bits (286), Expect = 1.0e-25 Identity = 62/102 (60.78%), Postives = 78/102 (76.47%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. TAIR10
Match: AT1G06920.1 (ovate family protein 4) HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22 Identity = 57/104 (54.81%), Postives = 67/104 (64.42%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. TAIR10
Match: AT5G58360.1 (ovate family protein 3) HSP 1 Score: 100.5 bits (249), Expect = 2.0e-21 Identity = 49/93 (52.69%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. TAIR10
Match: AT4G18830.1 (ovate family protein 5) HSP 1 Score: 86.7 bits (213), Expect = 3.1e-17 Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. Swiss-Prot
Match: sp|Q9LZW2|OFP1_ARATH (Transcription repressor OFP1 OS=Arabidopsis thaliana OX=3702 GN=OFP1 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.7e-28 Identity = 81/177 (45.76%), Postives = 100/177 (56.50%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. Swiss-Prot
Match: sp|O04351|OFP2_ARATH (Transcription repressor OFP2 OS=Arabidopsis thaliana OX=3702 GN=OFP2 PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.9e-24 Identity = 62/102 (60.78%), Postives = 78/102 (76.47%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. Swiss-Prot
Match: sp|F4HNU8|OFP4_ARATH (Transcription repressor OFP4 OS=Arabidopsis thaliana OX=3702 GN=OFP4 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.3e-21 Identity = 57/104 (54.81%), Postives = 67/104 (64.42%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. Swiss-Prot
Match: sp|Q9LVL4|OFP3_ARATH (Transcription repressor OFP3 OS=Arabidopsis thaliana OX=3702 GN=OFP3 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.7e-20 Identity = 49/93 (52.69%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. Swiss-Prot
Match: sp|Q8VZN1|OFP5_ARATH (Transcription repressor OFP5 OS=Arabidopsis thaliana OX=3702 GN=OFP5 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 5.5e-16 Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. TrEMBL
Match: tr|A0A0A0KY70|A0A0A0KY70_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G332100 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.0e-112 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. TrEMBL
Match: tr|A0A1S4E4U7|A0A1S4E4U7_CUCME (transcription repressor OFP1 OS=Cucumis melo OX=3656 GN=LOC103501454 PE=4 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 7.3e-106 Identity = 300/335 (89.55%), Postives = 303/335 (90.45%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. TrEMBL
Match: tr|A0A0L9VRI0|A0A0L9VRI0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g048500 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.6e-47 Identity = 164/397 (41.31%), Postives = 190/397 (47.86%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. TrEMBL
Match: tr|A0A0S3SY10|A0A0S3SY10_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G109600 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.6e-47 Identity = 164/397 (41.31%), Postives = 190/397 (47.86%), Query Frame = 0
BLAST of CsaV3_4G027080 vs. TrEMBL
Match: tr|A0A1S3T9A1|A0A1S3T9A1_VIGRR (transcription repressor OFP1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106753075 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 4.5e-47 Identity = 171/397 (43.07%), Postives = 197/397 (49.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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