CsaV3_4G025120 (gene) Cucumber (Chinese Long) v3

NameCsaV3_4G025120
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 14759829 .. 14760782 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAGTTCTCGGAGATCAAGTCCTCCCAAGAGGGGCAGGGGATAAGTACTGTTAAAGCCAAGAGAACCGATGCCCGAATTATGTTTGTACCTATAGTTGAAAAACAATAACTTTCATTTGAATCTCACTTGTTATTACACTTTCAAGCCATATACAATATATGTTATATCTATTGGAGTCTACTAATTATCATCAGCTCCCTTATCTTTCCTTCTCTTTCTTCTGTCACCTATACAGGCCCTCACCACTTACTGTGGTTGGTCATGCTACTATCTTACCACCATTAAAATTATATATCTAGAAAGAAAAAAAAAAGGCATGGAATAATTTAGAACATCTGAAATGGGAAATTAAAACCATTTTTTCTCCATACTCTCAAGCCATCCACCGTTAGATAAAAAAAAAAAAAAAAAAAAAAAAAAGAACTGTGGACATCAATGATAAATCATGGACAATAACAGTAGACTGATAGTGACACAAGTAACTCTGTCCTGTCATATTTTGGACAGTAAATCCATGAAAAAATTTAAATTTCGAAAAGAAAAATCCCCCTTTTAAAAACTGCAGAAAGCAAATAAACACAAAATTCAAATCCGACAAAATAAAATGATATGGAAAATAGGTGGGTTGGAGGAAGGGGATCTGTAGTGTGTGTTCTTTTTGTTTGGATGTAAAGGAGTCCGACACGAGTCGTGGTCAAGTGTGGGATCCAAAGCAAGGACTGGGACACCTCGGAGCCGCTCCATCCTTCAAACACGAGATCCTTGAGTCACAACTGGGGCCCTAATACAAGGTGTCTCACAGAAACCATTGACTTCTTTGCTTCGGTGTGTACCGTGGCTAAGGCTCGGATCTGGACACTCAGTCAAACAAACCACTGGTCTGGTTGTAGGGTCGGGTGTGAAAAGTCAAAGCCAGAAGTAGACAAATCTTTGCTCACTTTGAAGTAA

mRNA sequence

ATGGATAAGTTCTCGGAGATCAAGTCCTCCCAAGAGGGGCAGGGGATAAGTACTGTTAAAGCCAAGAGAACCGATGCCCGAATTATGAGTCCGACACGAGTCGTGGTCAAGTGTGGGATCCAAAGCAAGGACTGGGACACCTCGGAGCCGCTCCATCCTTCAAACACGAGATCCTTGAGTCACAACTGGGGCCCTAATACAAGGTGTCTCACAGAAACCATTGACTTCTTTGCTTCGGTGTGTACCGTGGCTAAGGCTCGGATCTGGACACTCAGTCAAACAAACCACTGGTCTGGTTGTAGGGTCGGGTGTGAAAAGTCAAAGCCAGAAGTAGACAAATCTTTGCTCACTTTGAAGTAA

Coding sequence (CDS)

ATGGATAAGTTCTCGGAGATCAAGTCCTCCCAAGAGGGGCAGGGGATAAGTACTGTTAAAGCCAAGAGAACCGATGCCCGAATTATGAGTCCGACACGAGTCGTGGTCAAGTGTGGGATCCAAAGCAAGGACTGGGACACCTCGGAGCCGCTCCATCCTTCAAACACGAGATCCTTGAGTCACAACTGGGGCCCTAATACAAGGTGTCTCACAGAAACCATTGACTTCTTTGCTTCGGTGTGTACCGTGGCTAAGGCTCGGATCTGGACACTCAGTCAAACAAACCACTGGTCTGGTTGTAGGGTCGGGTGTGAAAAGTCAAAGCCAGAAGTAGACAAATCTTTGCTCACTTTGAAGTAA

Protein sequence

MDKFSEIKSSQEGQGISTVKAKRTDARIMSPTRVVVKCGIQSKDWDTSEPLHPSNTRSLSHNWGPNTRCLTETIDFFASVCTVAKARIWTLSQTNHWSGCRVGCEKSKPEVDKSLLTLK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G025120.1CsaV3_4G025120.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G025120CsGy4G014250Cucumber (Gy14) v2cgybcucB171
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G025120Cucumber (Chinese Long) v3cuccucB116
CsaV3_4G025120Cucumber (Chinese Long) v3cuccucB170
CsaV3_4G025120Silver-seed gourdcarcucB0614
CsaV3_4G025120Silver-seed gourdcarcucB0971
CsaV3_4G025120Silver-seed gourdcarcucB1043
CsaV3_4G025120Cucumber (Gy14) v2cgybcucB127
CsaV3_4G025120Cucumber (Gy14) v2cgybcucB226
CsaV3_4G025120Cucumber (Gy14) v1cgycucB057
CsaV3_4G025120Cucumber (Gy14) v1cgycucB263
CsaV3_4G025120Cucumber (Gy14) v1cgycucB283
CsaV3_4G025120Cucurbita maxima (Rimu)cmacucB0302
CsaV3_4G025120Cucurbita maxima (Rimu)cmacucB0797
CsaV3_4G025120Cucurbita maxima (Rimu)cmacucB0850
CsaV3_4G025120Cucurbita maxima (Rimu)cmacucB0853
CsaV3_4G025120Cucurbita maxima (Rimu)cmacucB0989
CsaV3_4G025120Cucurbita maxima (Rimu)cmacucB1016
CsaV3_4G025120Cucurbita moschata (Rifu)cmocucB0295
CsaV3_4G025120Cucurbita moschata (Rifu)cmocucB0781
CsaV3_4G025120Cucurbita moschata (Rifu)cmocucB0840
CsaV3_4G025120Cucurbita moschata (Rifu)cmocucB0837
CsaV3_4G025120Cucurbita moschata (Rifu)cmocucB0973
CsaV3_4G025120Cucurbita moschata (Rifu)cmocucB0999
CsaV3_4G025120Cucurbita pepo (Zucchini)cpecucB0075
CsaV3_4G025120Cucurbita pepo (Zucchini)cpecucB0508
CsaV3_4G025120Cucurbita pepo (Zucchini)cpecucB0510
CsaV3_4G025120Cucurbita pepo (Zucchini)cpecucB0611
CsaV3_4G025120Cucurbita pepo (Zucchini)cpecucB0770
CsaV3_4G025120Wild cucumber (PI 183967)cpicucB160
CsaV3_4G025120Wild cucumber (PI 183967)cpicucB212
CsaV3_4G025120Wild cucumber (PI 183967)cpicucB278
CsaV3_4G025120Bottle gourd (USVL1VR-Ls)cuclsiB272
CsaV3_4G025120Bottle gourd (USVL1VR-Ls)cuclsiB299
CsaV3_4G025120Bottle gourd (USVL1VR-Ls)cuclsiB308
CsaV3_4G025120Melon (DHL92) v3.5.1cucmeB270
CsaV3_4G025120Melon (DHL92) v3.5.1cucmeB293
CsaV3_4G025120Melon (DHL92) v3.5.1cucmeB327
CsaV3_4G025120Melon (DHL92) v3.6.1cucmedB264
CsaV3_4G025120Melon (DHL92) v3.6.1cucmedB285
CsaV3_4G025120Melon (DHL92) v3.6.1cucmedB320
CsaV3_4G025120Watermelon (Charleston Gray)cucwcgB282
CsaV3_4G025120Watermelon (Charleston Gray)cucwcgB318
CsaV3_4G025120Watermelon (97103) v1cucwmB302
CsaV3_4G025120Watermelon (97103) v1cucwmB355
CsaV3_4G025120Watermelon (97103) v2cucwmbB276
CsaV3_4G025120Watermelon (97103) v2cucwmbB307
CsaV3_4G025120Wax gourdcucwgoB361
CsaV3_4G025120Wax gourdcucwgoB397