CsaV3_4G024170 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTAATAATTAGTAACTCAACACTCCATCCAAAGCTTAAGGCTAAATCTGTCAATATGATCAAGGAAAAGGAAGGGAAAGAAGAAGCCTTCATTGCATAGGCCGACCCCTTCCACTTGTTAGTCAATTGGTCTTGTGTGTACCTCTCTCAAGAGCAAAAGGTGGGGAATTCTTCCTGTACCGATTTTTATTGAAGGTCATTGAGAGGTAGGTCATGGGGGAGCTAATTTTCGTCTGCATAGGTTTTCTTTCTTGAATTTTTTGTTCATTAGCATGGGCCAAGTTGCAAGTATAATTTATTACAGCGATTTTTAAAGGTCTAACTTAGTTACAAGGATATTTTTTTCCTATATTCGACGCAAAGGCTGTGTAGTTTTTGTTTTTTTCTATTTGGTTCCGGTCAGTTAAATCAGCATTTTGGAGATTCTGATGATGCACTTTATGTGTGGAATAAGAAAGTGAAGTACAATGATGGAAAATGGAAATTGGGTTTTCGTTTAAACTGGTTCAATGGTCGTTGCTGATGCCAAATCTGTAACTATTACTATTTAGAACGATTTGATCAAGCTTAATGAAGCAGAGTTCTTATTCATTCTCGTGAGTCCGAGTTGAATCTCGGTTTTCTTTTAGCTGCTACAGCAAACTTGAGGGTTTCTAGGGTTTAGAGGCACGAAAATGGATAGTTCAGGTTTGGGAGGTGGGTTTCTGTCAGGAAATGGGGGGTTATTAGATTTGGAGTCTCCTATACGACGACCTCAAAAAACCCAATTGGTTAATCCCTCGTTGACACAACGCCATCAATTGAACATGATGAATAATTTTGAAGGTGATCACCAGTCCATTGGGATTTTGGACTCGAAAAGCCTGGGACAGAAGGATTTATTGATGGCGTTTAATAGAGGGAAAGCTATTGCCTCTGGTTGCATTACAAACAATTACACAAGTGAAGAAGATGAGCCAAGTTATACTGAGGATGGTGAGTGCTCTGAGTTTTTAAAGGGCAAAAAGGGCTCTCCATGGCAGAGAATGAAGTGGACAGATGAGATTGTGAGGCTTCTCATAGCAGTGGTTGCTTGTGTAGGTGACGATGGCGAGGCTGGAATGGGATCGAAGAGAAAATCTGGGATTTTGCATAAGAAGGGAAAATGGAAAACAGTGTCAAAGATTATGCAAAGTAAGGGGTGTCATGTTTCTCCTCAGCAGTGTGAGGACAAGTTCAATGACTTAAACAAAAGATACAAGAGATTGAACGATATCCTTGGGAAGGGAACCAGTTGTAGGGTTGTGGAGAACCCTGCACTCATGGACTCAATGCCTCACCTCTCAAGTAAAGCCAAGGATGATGTAAGAAAAATATTGAGCTCAAAACACTTGTTTTATAAGGAAATGTGTGCTTACCATAATGGACAAACAATTCCTGGTTGCCAGGATGTTGATTTCCAAGGTAAAATTTTGCCTGTTGCAAATTTCTCCAAAGGTAATAATGAGTCGGAGGATAGTGACAGTGACAGTGACAGTGGTGAATCAGATAACGAAGATGATCACTCTCCGGTGGAAAATAGATTATGGTCGTCTGAATCTCGTGGCAGGGATAAAGTGAGTGCAGATGATGGTCCTCTTTGGTCAAACTCTGTTGGAAAAAATGAATTTGAAGGTCAAATTGATGTCTTTCTTTCAGATCCAACCAAGTCCCATTGGGAGCGCAAAGTGTGGATTAAAAAACAGATGCTACAACTTCAGGAGCAATGCAACAGCTTCCAGGCTCAATCTGTTGAACTTGAGAAACAACGTTTCAAATGGTTAAGATATTGCAGTAAGAAAAATAGGGATTTGGAAAGAGCGAGGCTTGAAAATGAGAGGATGAAACTAGATAATGAGCAGAGAGTACTGCAACTGAAGCGGAAGGAAATGGAACTAGAATTAAAAAGGTCTGATTTAGCCGTTGGCCCACTCCTTGCCATTGATAGAATTCAAGGGAGAGAGCAACTTGATTTGGGTATGCATTGACAGCACACGAAGAACTGAGAAAACCATCTATATTTCAGAGCTGTTGGTTTGCACGAGATTTTGCCGATCATTGTGGAACAAATCCTTTAAGCCAAATGCATGTTATCATGCTAAGCTTGTAAGCATGTGTATACTTGCTTTCACTTTAGGCTGACCCTTCTTGTTGGCCCTTGGAACTTTCTGCTGTAAAGCTCAATGATTAATGTTTAAATGCCTTGGTTTCCATTTTCTAGAAATTTGTCCTTTTCTTTTTCAAGGATATAAATTTGTGTGACTATATGGATTTATGTTAACATGCGAGTCTGGTGAACTGCTTGTTCTGAGAACAACATCAAATCTCTTCACCCTTCATGGATATCCTAGATTCTCAGTTTCGGAGGTAATCAATGATAAATGTTAGTTCAAATGTGTTGTTTTCTTGACATTCTGCATTTTGGCTCTCCACGTTTTTGCTTTTGAGATTTGAGAATGTGAACATTTCTCATATCTCTATCTTGATCATCCCATATAATCCATGACAAAGAAAATGTTTCAAGAGGATCAAATCCCTGCTTCCTGTGCGTGCTGCAGAACCGCATTAATTCAATTCCTCAAGGTTTAGACATTAATTAAATGCTCAACTTGGGTTTTATGATAATTGTATTTGTGAAAGAGGATATGAGGGCTGCCTGCATTTGATTTTCTTCACTATTGTTTTCGTCTCTTGTTGATCGGGCACATCTTTGTCATCATCTTTAGAATTTCATCACCTCTAATGGTACTTGTATTTCCCATTCGTTTCTCTCTTTGGTGGAGTATGCCCGGAATTGCTTAGAACTAGAAGTATGGTTTCTACTCTGTTCCTTCTTTTCATTGCCAGAGTCACTCTCATGAGTATGCACCCACCTATTTTTTAGTGATTGAATGTCCAACTCCATGTGTAACTTCCCCGTACTTTTGAAGTCTTGTATTCAATGCAGATACTCAAGAAATATTTCTTGACTAATTTGTTTGATTTCTTATTGACTTGATGATAGTTTGCCACATATTTACATTGTCCTGTTGTATGGGATGACCACAACTTAGAACTGATCCATTTTTTGGTCCTGACTGACTGAGTTTGTTTGATTAAGACTTATAAAATCGAGCACAAGAACCACAAAAGAAAAAAAATGGAACGACAAAAAGTGTAGCCGTCAATCTTATTACATTCTAGGCTACTTGTACTTGGAAAATTTGAAAATAATTTAGATTGACTCATGCTATCCCGGTAGGGTGTAGTGTAGAAGATTTGCTAAAGATGCAAGCACTGAATTAAAAGTAAAAGTGTTATTATAGAAACATTTACTATATACTGCAGAGAATTGGGTAGGCTATAATGGCTGAACATGGTGTTTGCTGTTGTAACTTTTGTAGACAGATAAGACGAATGGAGAATATGATTCATAGTTTCTTTCCTTGCACGCCATGTTTTCTAGTTCTATGATCTCTCACTCATGTTTTTTTACTTTTGGCCATTTTGTGGACAGATCACAGACCTTATTAAAGCTATCTACAAGAGAAGACTCCCTTTGAAAAGTGCTTGGACGACAAAATCATGGCTATGGATAAACTCTCCACTCTTCTTTCAGTGGTACCGGTTTTGCTGAGAAAAACATCTAGTTCTGCCTCTCCTTCAGTTAACTGTATTTCATGGACCCCATACAGTTCTTAAATATTATCTTTGTGGCAAATAATGAATAGAGGTAGTATTTTCATACTAATGCTAGAAAATTTTCCTGTCTTTCTTGGATGCTCATCTGCTATGTTATCAGAATAAAGCTCTCAGATTATGAACTTTTAAGTTTTATTATTATTAACTTTTGACCCGA ATGGATAGTTCAGGTTTGGGAGGTGGGTTTCTGTCAGGAAATGGGGGGTTATTAGATTTGGAGTCTCCTATACGACGACCTCAAAAAACCCAATTGGTTAATCCCTCGTTGACACAACGCCATCAATTGAACATGATGAATAATTTTGAAGGTGATCACCAGTCCATTGGGATTTTGGACTCGAAAAGCCTGGGACAGAAGGATTTATTGATGGCGTTTAATAGAGGGAAAGCTATTGCCTCTGGTTGCATTACAAACAATTACACAAGTGAAGAAGATGAGCCAAGTTATACTGAGGATGGTGAGTGCTCTGAGTTTTTAAAGGGCAAAAAGGGCTCTCCATGGCAGAGAATGAAGTGGACAGATGAGATTGTGAGGCTTCTCATAGCAGTGGTTGCTTGTGTAGGTGACGATGGCGAGGCTGGAATGGGATCGAAGAGAAAATCTGGGATTTTGCATAAGAAGGGAAAATGGAAAACAGTGTCAAAGATTATGCAAAGTAAGGGGTGTCATGTTTCTCCTCAGCAGTGTGAGGACAAGTTCAATGACTTAAACAAAAGATACAAGAGATTGAACGATATCCTTGGGAAGGGAACCAGTTGTAGGGTTGTGGAGAACCCTGCACTCATGGACTCAATGCCTCACCTCTCAAGTAAAGCCAAGGATGATGTAAGAAAAATATTGAGCTCAAAACACTTGTTTTATAAGGAAATGTGTGCTTACCATAATGGACAAACAATTCCTGGTTGCCAGGATGTTGATTTCCAAGGTAAAATTTTGCCTGTTGCAAATTTCTCCAAAGGTAATAATGAGTCGGAGGATAGTGACAGTGACAGTGACAGTGGTGAATCAGATAACGAAGATGATCACTCTCCGGTGGAAAATAGATTATGGTCGTCTGAATCTCGTGGCAGGGATAAAGTGAGTGCAGATGATGGTCCTCTTTGGTCAAACTCTGTTGGAAAAAATGAATTTGAAGGTCAAATTGATGTCTTTCTTTCAGATCCAACCAAGTCCCATTGGGAGCGCAAAGTGTGGATTAAAAAACAGATGCTACAACTTCAGGAGCAATGCAACAGCTTCCAGGCTCAATCTGTTGAACTTGAGAAACAACGTTTCAAATGGTTAAGATATTGCAGTAAGAAAAATAGGGATTTGGAAAGAGCGAGGCTTGAAAATGAGAGGATGAAACTAGATAATGAGCAGAGAGTACTGCAACTGAAGCGGAAGGAAATGGAACTAGAATTAAAAAGGTCTGATTTAGCCGTTGGCCCACTCCTTGCCATTGATAGAATTCAAGGGAGAGAGCAACTTGATTTGGGTATGCATTGA ATGGATAGTTCAGGTTTGGGAGGTGGGTTTCTGTCAGGAAATGGGGGGTTATTAGATTTGGAGTCTCCTATACGACGACCTCAAAAAACCCAATTGGTTAATCCCTCGTTGACACAACGCCATCAATTGAACATGATGAATAATTTTGAAGGTGATCACCAGTCCATTGGGATTTTGGACTCGAAAAGCCTGGGACAGAAGGATTTATTGATGGCGTTTAATAGAGGGAAAGCTATTGCCTCTGGTTGCATTACAAACAATTACACAAGTGAAGAAGATGAGCCAAGTTATACTGAGGATGGTGAGTGCTCTGAGTTTTTAAAGGGCAAAAAGGGCTCTCCATGGCAGAGAATGAAGTGGACAGATGAGATTGTGAGGCTTCTCATAGCAGTGGTTGCTTGTGTAGGTGACGATGGCGAGGCTGGAATGGGATCGAAGAGAAAATCTGGGATTTTGCATAAGAAGGGAAAATGGAAAACAGTGTCAAAGATTATGCAAAGTAAGGGGTGTCATGTTTCTCCTCAGCAGTGTGAGGACAAGTTCAATGACTTAAACAAAAGATACAAGAGATTGAACGATATCCTTGGGAAGGGAACCAGTTGTAGGGTTGTGGAGAACCCTGCACTCATGGACTCAATGCCTCACCTCTCAAGTAAAGCCAAGGATGATGTAAGAAAAATATTGAGCTCAAAACACTTGTTTTATAAGGAAATGTGTGCTTACCATAATGGACAAACAATTCCTGGTTGCCAGGATGTTGATTTCCAAGGTAAAATTTTGCCTGTTGCAAATTTCTCCAAAGGTAATAATGAGTCGGAGGATAGTGACAGTGACAGTGACAGTGGTGAATCAGATAACGAAGATGATCACTCTCCGGTGGAAAATAGATTATGGTCGTCTGAATCTCGTGGCAGGGATAAAGTGAGTGCAGATGATGGTCCTCTTTGGTCAAACTCTGTTGGAAAAAATGAATTTGAAGGTCAAATTGATGTCTTTCTTTCAGATCCAACCAAGTCCCATTGGGAGCGCAAAGTGTGGATTAAAAAACAGATGCTACAACTTCAGGAGCAATGCAACAGCTTCCAGGCTCAATCTGTTGAACTTGAGAAACAACGTTTCAAATGGTTAAGATATTGCAGTAAGAAAAATAGGGATTTGGAAAGAGCGAGGCTTGAAAATGAGAGGATGAAACTAGATAATGAGCAGAGAGTACTGCAACTGAAGCGGAAGGAAATGGAACTAGAATTAAAAAGGTCTGATTTAGCCGTTGGCCCACTCCTTGCCATTGATAGAATTCAAGGGAGAGAGCAACTTGATTTGGGTATGCATTGA MDSSGLGGGFLSGNGGLLDLESPIRRPQKTQLVNPSLTQRHQLNMMNNFEGDHQSIGILDSKSLGQKDLLMAFNRGKAIASGCITNNYTSEEDEPSYTEDGECSEFLKGKKGSPWQRMKWTDEIVRLLIAVVACVGDDGEAGMGSKRKSGILHKKGKWKTVSKIMQSKGCHVSPQQCEDKFNDLNKRYKRLNDILGKGTSCRVVENPALMDSMPHLSSKAKDDVRKILSSKHLFYKEMCAYHNGQTIPGCQDVDFQGKILPVANFSKGNNESEDSDSDSDSGESDNEDDHSPVENRLWSSESRGRDKVSADDGPLWSNSVGKNEFEGQIDVFLSDPTKSHWERKVWIKKQMLQLQEQCNSFQAQSVELEKQRFKWLRYCSKKNRDLERARLENERMKLDNEQRVLQLKRKEMELELKRSDLAVGPLLAIDRIQGREQLDLGMH
BLAST of CsaV3_4G024170 vs. NCBI nr
Match: XP_004142119.1 (PREDICTED: uncharacterized protein LOC101205501 [Cucumis sativus] >KGN54170.1 hypothetical protein Csa_4G290850 [Cucumis sativus]) HSP 1 Score: 780.4 bits (2014), Expect = 3.2e-222 Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. NCBI nr
Match: XP_008449727.1 (PREDICTED: uncharacterized protein LOC103491522 [Cucumis melo]) HSP 1 Score: 757.7 bits (1955), Expect = 2.2e-215 Identity = 431/446 (96.64%), Postives = 434/446 (97.31%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. NCBI nr
Match: XP_022995089.1 (uncharacterized protein LOC111490737 [Cucurbita maxima]) HSP 1 Score: 567.0 bits (1460), Expect = 5.6e-158 Identity = 299/356 (83.99%), Postives = 315/356 (88.48%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. NCBI nr
Match: XP_022957960.1 (uncharacterized protein LOC111459338 [Cucurbita moschata] >XP_022957961.1 uncharacterized protein LOC111459338 [Cucurbita moschata] >XP_022957962.1 uncharacterized protein LOC111459338 [Cucurbita moschata] >XP_022957963.1 uncharacterized protein LOC111459338 [Cucurbita moschata]) HSP 1 Score: 563.9 bits (1452), Expect = 4.8e-157 Identity = 298/356 (83.71%), Postives = 312/356 (87.64%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. NCBI nr
Match: XP_023534092.1 (uncharacterized protein LOC111795758 [Cucurbita pepo subsp. pepo] >XP_023534093.1 uncharacterized protein LOC111795758 [Cucurbita pepo subsp. pepo] >XP_023534094.1 uncharacterized protein LOC111795758 [Cucurbita pepo subsp. pepo] >XP_023534095.1 uncharacterized protein LOC111795758 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 560.5 bits (1443), Expect = 5.3e-156 Identity = 296/356 (83.15%), Postives = 311/356 (87.36%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. TAIR10
Match: AT1G21200.1 (sequence-specific DNA binding transcription factors) HSP 1 Score: 226.5 bits (576), Expect = 3.3e-59 Identity = 105/167 (62.87%), Postives = 132/167 (79.04%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. TAIR10
Match: AT1G76870.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1)) HSP 1 Score: 196.1 bits (497), Expect = 4.7e-50 Identity = 90/159 (56.60%), Postives = 124/159 (77.99%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. TAIR10
Match: AT3G10040.1 (sequence-specific DNA binding transcription factors) HSP 1 Score: 167.5 bits (423), Expect = 1.8e-41 Identity = 84/148 (56.76%), Postives = 101/148 (68.24%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. TrEMBL
Match: tr|A0A0A0KX12|A0A0A0KX12_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G290850 PE=4 SV=1) HSP 1 Score: 780.4 bits (2014), Expect = 2.1e-222 Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. TrEMBL
Match: tr|A0A1S3BM36|A0A1S3BM36_CUCME (uncharacterized protein LOC103491522 OS=Cucumis melo OX=3656 GN=LOC103491522 PE=4 SV=1) HSP 1 Score: 757.7 bits (1955), Expect = 1.5e-215 Identity = 431/446 (96.64%), Postives = 434/446 (97.31%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. TrEMBL
Match: tr|A0A2P4MI13|A0A2P4MI13_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_39702 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.3e-131 Identity = 291/452 (64.38%), Postives = 336/452 (74.34%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. TrEMBL
Match: tr|A0A2I4FH56|A0A2I4FH56_9ROSI (uncharacterized protein LOC108998738 OS=Juglans regia OX=51240 GN=LOC108998738 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127 Identity = 306/452 (67.70%), Postives = 349/452 (77.21%), Query Frame = 0
BLAST of CsaV3_4G024170 vs. TrEMBL
Match: tr|W9S6Z6|W9S6Z6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015274 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 1.8e-120 Identity = 295/454 (64.98%), Postives = 340/454 (74.89%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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