CsaV3_4G023870 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G023870
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionLipoxygenase
Locationchr4 : 13895558 .. 13900190 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTGTTGTCAATTCATTCTTCTGATGAGGAGTACATTGGGGATGATATAGAGCCAGCCTGGGCTCTCGAGCCGTGCATAAGTAAGGCCTTCGAAAGGTTTAAAGCCAAATTGACGGATCTTGAAAAGAGGATCAACGAGCTTAATGAGAACAAAGATTTGAAGAATAGGTGTGGAGCTGGGATTATACCATACGAAGCTATGAAACCACGTTCAAAGCCTGGAATCACTGGAAGTGGAGTTCCATACAGCGTTTCCATCTAAGCATAGTCTTCTCCATATTTATTTCCATTTTGTTTGTGTGTGTTCTTTCTTCTTGCAGGTTTTCTTTTTCTCTAAAAATTAAGAACATATGTCAGCCTATTTTAAGTGTGTTTTCCTTTTTAAGTACTAGTATGTGTGTGTCTCATTTACGTCCAATATGTCATTGTTATTCCATGTTTTTAATTATAAAATAAACGAGGAAGCAAATGCATTCTTGACTTTTTCTTCATATATTTCATTCATATCTTGATGTTATTATTTTAGTTGTAAAATATCAATCAAGTTATTATTTATGACATAGGCGTGTACTAGGAAAAAACACTGATTCTAACTTTTTTTTTCTTCACAAAAGAAAGAGAAAATAGAATACTACTCACAAATAATCACTCCACAAAGTGTTACGTCCCCGCATTAAAAACAATGTAATTAAAAATTATAAATAGGTGGCTAAGTTAGTATTATTACTCTCGTCCAAGCACGTTTACGTGCAAAGTTTTGATGGGATCCAATACATTAGTACCTGGTATAACGAGATCACTCTAGGGTGTCAAACTAGTAGCTAATTGTTATATAATTTTCATATTAGGGATTTTTTAAAAATAAAACATTTACCCTTTATAGAACAATTTCGAAACCGAAAAAAGGTTATAGGACCACAATGAGAGATACAAAAAAAAAAAAAAAAAAAAAAACAATAGTTAACACGCGATTAATCAGCCACACGCACGTATGAGTAATATTTTTTCTAAACGATCGTGTATTACAGTCTAAATGAATGATCTACGATCATTTAAGTCATGATACATGATCGTGTAGTTCTTTTTAAATGATGAAAAAAATGGCTTCAAATCTAAACGATTGTGTTGGCCATGCTAAACAATCGTGTTAACTATGTTAAGCAATTGTTTAGATCATATCTCCACACGACCATATAATTCTTTTTAAACGATGGAAAAAGGGACTTCAAATCTAAAAGATTGTGTTCACCATGCGAAACGATTGTGTTGACTATGGTAAGTGATCCTTTAGATTACATCAACATTATCATGTAGTTCTTTTTAAACGTGGAAAAATTAGAGGCTTCAAATTTAAACGATCATGTTTATTATGGTAAACGATCATATCGAGAATGGTTAAACGATCATTCAGATCATATCAAAGTGATATTTAAATGATTCTGATACTTTCAAATATGAGAAAGATGAAGTACCTTCAAATTAGAATTTTGTTGAAAAGGGTGAAGATAAAATATCATATTTAAATAGAAAAATAAATCGTTTAATAATATAAGAAGAAAATGAGAAGAAATGTGCTGATAAAAGATTGATGTTACCTGATTAAGAAAAATTAATTTCAGAAATATTTATTAAATATGATTCATAAAAAAATTCAACTTTGTTTCATAACAAAGTCAACTTTTAAATTCATTAGAGAAATTGTCACTCACCCTTTCAAATAATAATAATATAATTGGAGTTATTTTGGTATAAACCAATAGTTGCTAAACTAAAATATGAACGAGAGAGATAATATATAACACAAAAGAGAGAAGAGAAAAGTAAAGTATAGAGAGCAATTTTTATTCTTCACATTTGTTCTTGAAGTGGTTTTTTTTTTTTTTTTTTTTTCGTTTTTCAATAAAACTATACGTTGGGTTACGGGTGCACACGTACATCTCCTCTAGGTGGACACATTCTTAAAGCATTACACTCCAACTCTCTAGAATAAAAACCATGGTACCACTACAAAAAAAGCGGTCTACAAAGACAGTTATTTTTTATCGCGAATAATATTCATGACAGTTATTTACAGTCATAGAAGTGGGAGTCATGGAAAGTCCTTCCATGACAGTTTTCAATAAATTTTTTCATGCTAGAAAATAAACGTCGTTAATTACTATTTTATGACAACAAATAACTGTCATCATTTGCGTATTAACGACAGTTTAAAAATGTCGCAATTCGTTTATTATGACATTTTTTAAATGTCAAGAATATGTCAATCGTGACACTTTTTTTAGAAATTAAATGTCATTGTTTTGCTATTGACGACATTTTTTTCCTGTCAAATATAAGACAATCGTGATAATTTTTCTTCTAAAAACAATGTCATTGTTTTAATATTAACGACAATTATGGAGTGTAACGAATTCATAAATTATGACATTTATTTCCTATTGCAAATTATTCAATTACTACTGTTTTTTTTTTTTTTTTTTTGTTCTCCTTGTCGCTCCGCGATTATCGAGCCATTTGAACGACAATAATGTTATATTACATAACACCCATATAGAAACAAATGGTTGACATTTTAATATATACACACTATAATATACTTTATAATATTCGTACATTTTCAATCAAGTTTGAACAATTTACAAGTCTAGAATTTCAGTCCTTAAGCAAAACTAATGTAAATACCATCATTTGGGATGTATATATAACTGTCATACTAAGTAGTTTTTCTTGTAATGTGCTGACCTAGCAGGGATGGTACACCTAATAACCCACAAATTGTATCTTTCTTTAAAAACCAACCAAATTAAAAAGTGATTACATTAGAGCGCCACCATCCTTGCACTATCTCAAGTACCTTCATGTTCTAACCATTTGCTTAAATATTGACTTAACATTAGAGGTTCATTGATAGACATCAAATTCAGTGATTTTTTTCTTTAACTTATATGTCCTACGTCCTCAAAATTACAAATCCACTATCGAAGACATATAAAAATGAGCCAAGTCTTCTTGTCCAAGTTTTGTCATCAACCATAATGATAAATTTATAATAAGGTTTGGTTGTTGTTACAAAATTGATTATGGAACACTATTGGCTCTCGACGATACAGTTTTTGAAATTGCTTATAAATATAACTAATTAACAAGTGAGGGTTTTATAATGATTTTTTAAAATATACACAAGCCAATGACAAACGCAAAACGAGCATTTTATGCTTGAAGAATCGTTAAAAATAGTAAATTTGACAAAATATTTATAATTTATAGTAAAATTTTGGATTCTATTAATAATAAACAATGATAGACACTTATAAGCTTCTATAAATGTATTGCTAGAAGTCTATTGTTTCTATAATCAATAAAATCTAAAATTTTACTCTAAGTTGTAAATATTTTAATTTATTTTATTATTTTAAAAAATGTCCTTTTTGATGATTTTAATTTTAAATTCATAAGCTCGAATATTTTTTTTATCTTTAATTCCTTTTTAATTTAGATTTTTTTAAAAAAAAAATAGTAGATTTTACAAAACATTTACAACCTATAGAAAATTATATCACCGATAGTCATTGACATGCTATAGTGATAGAATTTAAAACTTTGTTATAGCTTGTAAATATTTTAATTTATTTTGCTATTTTAAAAAATGCCTTCTTAATTTATTTGTATTTGTTTTCCATAACTTTTTAAACCTAGCCCTTGGCTTGGTAAACCCTTCCAAATTCATCCTCTAAATGGATCTTAAATTTCTTTTTTTAAAAAAAGAAGGCATGAGCCAATAGTAGCATTTGAACATCTTTACTAGGTGAACATCCTTATAGTACCATCATCATTCCCGTTTCATTAATATAAAAGAAAAGAGTATATAAAGTAAAGAATGTTCTAAAATAAGGGCTAGAGAATGGCCAAAATAAACCCATAAGTTATACAAAAGCGTGAATGTTTAAAGCAATAGTACTAATCTTTAATCCAAACATAGTTTTATAAATAAAAAATAAAAATAAATTAAAAAAAACATCAATTAAAGTAATATTTTCTTTTTTTTTTTTGCTTCCATGGACTTATCCTTTAAGTTGACTGTTGGTTTCCTTTGTGATTGTTGCAATTAATACTCCAATATTTTAAGACATTTAGAAAACATTTTTTTTAAAAAAAATATCAATATTTACGATGTTAACCAAAATAATTTAATATGTTTAAGAAAAACAAAAACAAAAAAAAAAAATTTTTGACAAGAGACCATAAGGGCATTAGAAAAAAAATAATTTAATGTATATGCTCTATATATTCAAATAGTAATTAAACTCTCAACCATCAATTGATGAAACAACAATAGCTAGGTCAAGATTTTATAATGTATTATATAATAACGACAAAATTATGGTGGTTGAGTTGTTGGACAAAATTAATAATAACAATAACAATAATAAATTGTGATGGGTGAGTGGAGATGCTCATTAATCAATTTTGATATTCAATCAGTAAAGTTGATTTTTTTTTTTTTAAATATACAAAAGATAAGGCGAGAGGAGATAGAAGTGCACCACATCAAAAGACCAGAAATGATATCATTGATCGATAAAAAGGTACCGAACGAGCTAGAGAGACGAAGCTTGGAGAGTCTATAG

mRNA sequence

ATGTTTGTGTTGTCAATTCATTCTTCTGATGAGGAGTACATTGGGGATGATATAGAGCCAGCCTGGGCTCTCGAGCCGTGCATAAGTAAGGCCTTCGAAAGGTTTAAAGCCAAATTGACGGATCTTGAAAAGAGGATCAACGAGCTTAATGAGAACAAAGATTTGAAGAATAGGTGTGGAGCTGGGATTATACCATACGAAGCTATGAAACCACGTTCAAAGCCTGGAATCACTGGAAGTGGAGTTCCATACAGCATAAGGCGAGAGGAGATAGAAGTGCACCACATCAAAAGACCAGAAATGATATCATTGATCGATAAAAAGGTACCGAACGAGCTAGAGAGACGAAGCTTGGAGAGTCTATAG

Coding sequence (CDS)

ATGTTTGTGTTGTCAATTCATTCTTCTGATGAGGAGTACATTGGGGATGATATAGAGCCAGCCTGGGCTCTCGAGCCGTGCATAAGTAAGGCCTTCGAAAGGTTTAAAGCCAAATTGACGGATCTTGAAAAGAGGATCAACGAGCTTAATGAGAACAAAGATTTGAAGAATAGGTGTGGAGCTGGGATTATACCATACGAAGCTATGAAACCACGTTCAAAGCCTGGAATCACTGGAAGTGGAGTTCCATACAGCATAAGGCGAGAGGAGATAGAAGTGCACCACATCAAAAGACCAGAAATGATATCATTGATCGATAAAAAGGTACCGAACGAGCTAGAGAGACGAAGCTTGGAGAGTCTATAG

Protein sequence

MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAGIIPYEAMKPRSKPGITGSGVPYSIRREEIEVHHIKRPEMISLIDKKVPNELERRSLESL
Homology
[Close]
BLAST of CsaV3_4G023870 vs. NCBI nr
Match: XP_011654363.1 (PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 4.1e-42
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG
Sbjct: 704 MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 763

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYEAMKPRSKPGITGSGVPYS+
Sbjct: 764 AGIIPYEAMKPRSKPGITGSGVPYSV 789

[Close]
BLAST of CsaV3_4G023870 vs. NCBI nr
Match: XP_004142238.2 (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 1.2e-33
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0 

Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LSIHS DEEYIGD IEPAWAL+  ISKAFE+FKA LTDLEK+I+ELN+NKDLKNR G
Sbjct: 736 MFLLSIHSPDEEYIGDAIEPAWALDQSISKAFEKFKANLTDLEKKIDELNQNKDLKNRYG 795

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           A IIPYEAMKPRSKPGITGSGVPYS+
Sbjct: 796 AAIIPYEAMKPRSKPGITGSGVPYSV 821

[Close]
BLAST of CsaV3_4G023870 vs. NCBI nr
Match: XP_011653578.1 (PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 2.0e-33
Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 0 

Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LSIHS DEEYIGD IEPAWAL+  ISKAFE+FKA LTDLEK+I+ELNENKDLKNR G
Sbjct: 734 MFLLSIHSPDEEYIGDAIEPAWALDQSISKAFEKFKANLTDLEKKIDELNENKDLKNRYG 793

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYE MKPRSKPG+TG GVPYS+
Sbjct: 794 AGIIPYEVMKPRSKPGVTGIGVPYSV 819

[Close]
BLAST of CsaV3_4G023870 vs. NCBI nr
Match: XP_008449947.1 (PREDICTED: lipoxygenase 2, chloroplastic-like, partial [Cucumis melo])

HSP 1 Score: 151.0 bits (380), Expect = 2.6e-33
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 0 

Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LSIHS DEEYIGD IEPAWAL+P IS+AFE+FKA LT LEK+I+ELN+NKDLKNR G
Sbjct: 512 MFLLSIHSPDEEYIGDAIEPAWALDPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYG 571

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYE MKPRSKPGITGSGVPYS+
Sbjct: 572 AGIIPYEVMKPRSKPGITGSGVPYSV 597

[Close]
BLAST of CsaV3_4G023870 vs. NCBI nr
Match: XP_016900756.1 (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 1.8e-29
Identity = 66/86 (76.74%), Postives = 73/86 (84.88%), Query Frame = 0 

Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LS+HS DEEYIGDDIEPAW L+  IS AFE FK KL  LE +I+ELN+N+DLKNR G
Sbjct: 361 MFLLSMHSPDEEYIGDDIEPAWDLDQSISNAFEEFKTKLMMLENKIDELNQNEDLKNRNG 420

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYEAMKPRS PGITG GVPYSI
Sbjct: 421 AGIIPYEAMKPRSNPGITGIGVPYSI 446

[Close]
BLAST of CsaV3_4G023870 vs. TAIR10
Match: AT3G45140.1 (lipoxygenase 2)

HSP 1 Score: 104.4 bits (259), Expect = 5.2e-23
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0 

Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           +LS HS DEEYIG+  E +WA EP I+ AFERFK KL  LE  I+E N N  LKNR GAG
Sbjct: 811 LLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAG 870

Query: 63  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++ YE +KP S+ G+TG GVPYSI
Sbjct: 871 VVKYELLKPTSEHGVTGMGVPYSI 894

[Close]
BLAST of CsaV3_4G023870 vs. TAIR10
Match: AT1G17420.1 (lipoxygenase 3)

HSP 1 Score: 83.6 bits (205), Expect = 9.4e-17
Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = 0 

Query: 4   LSIHSSDEEYIGDDIEPA-WALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 63
           LS HS DEEYIG+  +P+ W  +  I +AF  F A++  +EK I + N + D +NRCGAG
Sbjct: 834 LSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAG 893

Query: 64  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++PYE + P S+PG+T  GVP S+
Sbjct: 894 VLPYELLVPSSEPGVTCRGVPNSV 917

[Close]
BLAST of CsaV3_4G023870 vs. TAIR10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16
Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 0 

Query: 4   LSIHSSDEEYIGDDIEPA-WALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 63
           LS HS DEEYIG+  +P+ W  +  I  AF  F A++  +EK I++ N +   +NRCGAG
Sbjct: 841 LSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAG 900

Query: 64  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++PYE M P S+PG+T  GVP S+
Sbjct: 901 VLPYELMAPSSEPGVTCRGVPNSV 924

[Close]
BLAST of CsaV3_4G023870 vs. TAIR10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-15
Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 0 

Query: 4   LSIHSSDEEYIGD--DIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGA 63
           LS HS DEEY+ +  +++  W  +  + K F +F  +L  +EK INE N++K LKNR GA
Sbjct: 831 LSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGA 890

Query: 64  GIIPYEAMKPRSKPGITGSGVPYSI 87
           G+ PYE + P S  G+TG G+P SI
Sbjct: 891 GMPPYELLLPTSPHGVTGRGIPNSI 915

[Close]
BLAST of CsaV3_4G023870 vs. TAIR10
Match: AT1G55020.1 (lipoxygenase 1)

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-15
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 0 

Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           +LS HSSDE Y+G      WA E    +AFE+F  K+ ++EK I+E N+++ LKNR G  
Sbjct: 774 ILSTHSSDEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLV 833

Query: 63  IIPYEAMKPRSKPGITGSGVPYSI 87
            +PY  + P S+ G+TG G+P S+
Sbjct: 834 KMPYTLLFPSSEGGVTGRGIPNSV 857

[Close]
BLAST of CsaV3_4G023870 vs. Swiss-Prot
Match: sp|O24370|LOX21_SOLTU (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-22
Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 0 

Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           VLS HS DEEYIG+ IEP WA +P I+ AFE F  KL +LE  I+  N +  L NR GAG
Sbjct: 814 VLSNHSPDEEYIGEKIEPYWAEDPVINAAFEVFSGKLKELEGIIDARNNDSKLSNRNGAG 873

Query: 63  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++PYE +KP S+PG+TG GVPYSI
Sbjct: 874 VMPYELLKPYSEPGVTGKGVPYSI 897

[Close]
BLAST of CsaV3_4G023870 vs. Swiss-Prot
Match: sp|Q8GSM2|LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-22
Identity = 46/84 (54.76%), Postives = 60/84 (71.43%), Query Frame = 0 

Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           +LS HS DEEY+G+  EPAW  EP +  AFE+F  +L + E  I+  N N + KNRCGAG
Sbjct: 811 ILSSHSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAG 870

Query: 63  IIPYEAMKPRSKPGITGSGVPYSI 87
           I+PYE +KP S+PG+TG G+P SI
Sbjct: 871 IVPYELLKPFSEPGVTGRGIPNSI 894

[Close]
BLAST of CsaV3_4G023870 vs. Swiss-Prot
Match: sp|P38418|LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.3e-22
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0 

Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           +LS HS DEEYIG+  E +WA EP I+ AFERFK KL  LE  I+E N N  LKNR GAG
Sbjct: 811 LLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAG 870

Query: 63  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++ YE +KP S+ G+TG GVPYSI
Sbjct: 871 VVKYELLKPTSEHGVTGMGVPYSI 894

[Close]
BLAST of CsaV3_4G023870 vs. Swiss-Prot
Match: sp|O24371|LOX31_SOLTU (Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX3.1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.3e-17
Identity = 42/84 (50.00%), Postives = 58/84 (69.05%), Query Frame = 0 

Query: 4   LSIHSSDEEYIGDDIEPA-WALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 63
           LS HS DEEY+G+  +P+ W  +  I +AF +F A++  +EK I+E N N  LKNRCGAG
Sbjct: 829 LSTHSPDEEYLGERHQPSTWTGDAEIVEAFYKFSAEIGRIEKEIDERNANTKLKNRCGAG 888

Query: 64  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++PYE + P S PG+T  GVP S+
Sbjct: 889 VLPYELLAPSSGPGVTCRGVPNSV 912

[Close]
BLAST of CsaV3_4G023870 vs. Swiss-Prot
Match: sp|P38419|LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-16
Identity = 39/83 (46.99%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           VLS HS+DEEY+G +    W  +  +  A++ F A+L ++E  I+  N+++ LKNRCGAG
Sbjct: 839 VLSSHSTDEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAG 898

Query: 63  IIPYEAMKPRSKPGITGSGVPYS 86
           I+PY+ MKP S  G+TG G+P S
Sbjct: 899 ILPYQLMKPFSDSGVTGMGIPNS 921

[Close]
BLAST of CsaV3_4G023870 vs. TrEMBL
Match: tr|A0A1S3BNU6|A0A1S3BNU6_CUCME (lipoxygenase 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491676 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-33
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 0 

Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LSIHS DEEYIGD IEPAWAL+P IS+AFE+FKA LT LEK+I+ELN+NKDLKNR G
Sbjct: 512 MFLLSIHSPDEEYIGDAIEPAWALDPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYG 571

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYE MKPRSKPGITGSGVPYS+
Sbjct: 572 AGIIPYEVMKPRSKPGITGSGVPYSV 597

[Close]
BLAST of CsaV3_4G023870 vs. TrEMBL
Match: tr|A0A1S4DXP8|A0A1S4DXP8_CUCME (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC107990326 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29
Identity = 66/86 (76.74%), Postives = 73/86 (84.88%), Query Frame = 0 

Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LS+HS DEEYIGDDIEPAW L+  IS AFE FK KL  LE +I+ELN+N+DLKNR G
Sbjct: 361 MFLLSMHSPDEEYIGDDIEPAWDLDQSISNAFEEFKTKLMMLENKIDELNQNEDLKNRNG 420

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYEAMKPRS PGITG GVPYSI
Sbjct: 421 AGIIPYEAMKPRSNPGITGIGVPYSI 446

[Close]
BLAST of CsaV3_4G023870 vs. TrEMBL
Match: tr|A0A0A0KWY1|A0A0A0KWY1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287030 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.2e-27
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 25 EPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAGIIPYEAMKPRSKPGITGSGVPY 84
          EPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAGIIPYEAMKPRSKPGITGSGVPY
Sbjct: 12 EPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAGIIPYEAMKPRSKPGITGSGVPY 71

Query: 85 SI 87
          S+
Sbjct: 72 SV 73

[Close]
BLAST of CsaV3_4G023870 vs. TrEMBL
Match: tr|A0A1S3BNQ1|A0A1S3BNQ1_CUCME (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491544 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.0e-26
Identity = 57/86 (66.28%), Postives = 70/86 (81.40%), Query Frame = 0 

Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           M +LS HS DEEYIG ++EPAWALEP I KAF+RF+A L DLE++I+E N+NK LKNR G
Sbjct: 742 MILLSAHSPDEEYIGVEVEPAWALEPAIDKAFKRFQANLKDLEQQIDENNKNKSLKNRHG 801

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AG++PYE +KP S  GITG GVPYS+
Sbjct: 802 AGVVPYEVLKPTSTDGITGRGVPYSV 827

[Close]
BLAST of CsaV3_4G023870 vs. TrEMBL
Match: tr|A0A1S4DXQ4|A0A1S4DXQ4_CUCME (linoleate 13S-lipoxygenase 2-1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107991017 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.6e-24
Identity = 53/86 (61.63%), Postives = 67/86 (77.91%), Query Frame = 0 

Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           M +LS HS DEEYIG  IEPAWA +P I++AFE+FK +L  LEK I++ NEN +LKNR G
Sbjct: 218 MLILSAHSPDEEYIGKKIEPAWAEDPTIARAFEKFKMRLNKLEKTIDKRNENSELKNRRG 277

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AG++PYE +KP S  G+TG GVPYS+
Sbjct: 278 AGLVPYEVLKPTSDHGVTGKGVPYSV 303

The following BLAST results are available for this feature:
BLAST of CsaV3_4G023870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011654363.14.1e-4298.84PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sati... [more]
XP_004142238.21.2e-3383.72PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus][more]
XP_011653578.12.0e-3382.56PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sati... [more]
XP_008449947.12.6e-3382.56PREDICTED: lipoxygenase 2, chloroplastic-like, partial [Cucumis melo][more]
XP_016900756.11.8e-2976.74PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo][more]
BLAST of CsaV3_4G023870 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G45140.15.2e-2360.71lipoxygenase 2[more]
AT1G17420.19.4e-1747.62lipoxygenase 3[more]
AT1G72520.11.2e-1647.62PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G67560.11.4e-1545.88PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G55020.12.3e-1544.05lipoxygenase 1[more]
BLAST of CsaV3_4G023870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O24370|LOX21_SOLTU5.4e-2259.52Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LO... [more]
sp|Q8GSM2|LOX23_HORVU5.4e-2254.76Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.3 PE=1 SV=1[more]
sp|P38418|LOX2_ARATH9.3e-2260.71Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1[more]
sp|O24371|LOX31_SOLTU5.3e-1750.00Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LO... [more]
sp|P38419|LOXC1_ORYSJ1.2e-1646.99Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX... [more]
BLAST of CsaV3_4G023870 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BNU6|A0A1S3BNU6_CUCME1.8e-3382.56lipoxygenase 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491676 PE=3 ... [more]
tr|A0A1S4DXP8|A0A1S4DXP8_CUCME1.2e-2976.74Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC107990326 PE=3 SV=1[more]
tr|A0A0A0KWY1|A0A0A0KWY1_CUCSA3.2e-2798.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287030 PE=4 SV=1[more]
tr|A0A1S3BNQ1|A0A1S3BNQ1_CUCME6.0e-2666.28Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491544 PE=3 SV=1[more]
tr|A0A1S4DXQ4|A0A1S4DXQ4_CUCME5.6e-2461.63linoleate 13S-lipoxygenase 2-1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LO... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR036226LipOase_C_sf
IPR000907LipOase
IPR013819LipOase_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G023870.1CsaV3_4G023870.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..59
NoneNo IPR availableGENE3DG3DSA:1.20.245.10coord: 1..87
e-value: 5.5E-23
score: 83.5
NoneNo IPR availablePANTHERPTHR11771:SF65SUBFAMILY NOT NAMEDcoord: 3..87
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 3..71
e-value: 8.3E-20
score: 70.7
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 1..88
score: 29.694
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 3..87
IPR036226Lipoxigenase, C-terminal domain superfamilySUPERFAMILYSSF48484Lipoxigenasecoord: 2..86

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G023870Cla97C02G049640Watermelon (97103) v2cucwmbB293
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G023870Silver-seed gourdcarcucB0559
CsaV3_4G023870Silver-seed gourdcarcucB0960
CsaV3_4G023870Cucumber (Gy14) v2cgybcucB171
CsaV3_4G023870Cucurbita maxima (Rimu)cmacucB0660
CsaV3_4G023870Cucurbita maxima (Rimu)cmacucB0726
CsaV3_4G023870Cucurbita moschata (Rifu)cmocucB0645
CsaV3_4G023870Cucurbita moschata (Rifu)cmocucB0713
CsaV3_4G023870Cucurbita pepo (Zucchini)cpecucB0346
CsaV3_4G023870Cucurbita pepo (Zucchini)cpecucB0908
CsaV3_4G023870Wild cucumber (PI 183967)cpicucB212
CsaV3_4G023870Bottle gourd (USVL1VR-Ls)cuclsiB269
CsaV3_4G023870Melon (DHL92) v3.5.1cucmeB294
CsaV3_4G023870Melon (DHL92) v3.6.1cucmedB286
CsaV3_4G023870Watermelon (Charleston Gray)cucwcgB305
CsaV3_4G023870Watermelon (97103) v1cucwmB364
CsaV3_4G023870Wax gourdcucwgoB396