CsaV3_4G023860 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G023860
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Lipoxygenase
Location	chr4 : 13894814 .. 13895489 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCATAAATGCAAACGCTCGTAAAATCCTCATCTGCGCCGGTGGCATCATTGAAGGAACATTTTCTGCCGCATATCATTCAATGGAACTTAGTTCTTCAGCGTACAAAGAGTGGAGATTTGATTTGCAAGGCCTCCCTTATGATTTAGTTCACAGGTAATTAATTGAATTTAATTAACGCGAAGTTAATAACGGAATGGAATTATTGACAATGTGTTTTGTAACTAAATTTAAAACATAGGGGAATGGCGGAAACAAAAAAAGATGCAGAATGTCATGAGGTTATTGATAAGTTGACCATCAAGGATTATCCTTTTGCAAATGATGGTCTCCAATTATGGAATGCTCTATGGGAATGGGTGACCGAATATGTGAACCACTATTATAAATGTGATATGAATGCAGTAACTAATGATAAAGAGCTGCAAGCTTGGTGGAAAGAAATCAAAGACAAAGGGCACCCAGATATAAAGGAAGGATGGCCTAAACTAGAAACCAAAGAAGATCTCATTAAGATTGCATCAACCATAGCATGGGTAGGAAGTGGGCACCACGCATCTATCAATTTCCTTCAATATGCATATGGAGCTATATACCCAACCGACCCAGTGTTGCAAGGGCCAACATGCTCACAGAGAACAACCCCAGTGGAAAAATTTCCAAAGACTTTCTAA

mRNA sequence

ATGCGCATAAATGCAAACGCTCGTAAAATCCTCATCTGCGCCGGTGGCATCATTGAAGGAACATTTTCTGCCGCATATCATTCAATGGAACTTAGTTCTTCAGCGTACAAAGAGTGGAGATTTGATTTGCAAGGCCTCCCTTATGATTTAGTTCACAGGGGAATGGCGGAAACAAAAAAAGATGCAGAATGTCATGAGGTTATTGATAAGTTGACCATCAAGGATTATCCTTTTGCAAATGATGGTCTCCAATTATGGAATGCTCTATGGGAATGGGTGACCGAATATGTGAACCACTATTATAAATGTGATATGAATGCAGTAACTAATGATAAAGAGCTGCAAGCTTGGTGGAAAGAAATCAAAGACAAAGGGCACCCAGATATAAAGGAAGGATGGCCTAAACTAGAAACCAAAGAAGATCTCATTAAGATTGCATCAACCATAGCATGGGTAGGAAGTGGGCACCACGCATCTATCAATTTCCTTCAATATGCATATGGAGCTATATACCCAACCGACCCAGTGTTGCAAGGGCCAACATGCTCACAGAGAACAACCCCAGTGGAAAAATTTCCAAAGACTTTCTAA

Coding sequence (CDS)

ATGCGCATAAATGCAAACGCTCGTAAAATCCTCATCTGCGCCGGTGGCATCATTGAAGGAACATTTTCTGCCGCATATCATTCAATGGAACTTAGTTCTTCAGCGTACAAAGAGTGGAGATTTGATTTGCAAGGCCTCCCTTATGATTTAGTTCACAGGGGAATGGCGGAAACAAAAAAAGATGCAGAATGTCATGAGGTTATTGATAAGTTGACCATCAAGGATTATCCTTTTGCAAATGATGGTCTCCAATTATGGAATGCTCTATGGGAATGGGTGACCGAATATGTGAACCACTATTATAAATGTGATATGAATGCAGTAACTAATGATAAAGAGCTGCAAGCTTGGTGGAAAGAAATCAAAGACAAAGGGCACCCAGATATAAAGGAAGGATGGCCTAAACTAGAAACCAAAGAAGATCTCATTAAGATTGCATCAACCATAGCATGGGTAGGAAGTGGGCACCACGCATCTATCAATTTCCTTCAATATGCATATGGAGCTATATACCCAACCGACCCAGTGTTGCAAGGGCCAACATGCTCACAGAGAACAACCCCAGTGGAAAAATTTCCAAAGACTTTCTAA

Protein sequence

MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKEWRFDLQGLPYDLVHRGMAETKKDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWKEIKDKGHPDIKEGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVLQGPTCSQRTTPVEKFPKTF

Homology

[Close]

BLAST of CsaV3_4G023860 vs. NCBI nr
Match: XP_011654363.1 (PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 369.8 bits (948), Expect = 5.9e-99
Identity = 173/196 (88.27%), Postives = 175/196 (89.29%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKEWRFDLQGLPYDLVHRGMAETKK 60
           MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKEWRFDLQGLPYDLVHRGMAETKK
Sbjct: 484 MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKEWRFDLQGLPYDLVHRGMAETKK 543

Query: 61  DAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWKE 120
           DAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWKE
Sbjct: 544 DAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWKE 603

Query: 121 IKDKGHPDIKEGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVLQGP 180
           IKDKGHPDIKEGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAY +  P  P +   
Sbjct: 604 IKDKGHPDIKEGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYXSYIPNRPSVARA 663

Query: 181 TCSQRTTPVEKFPKTF 197
                  P  K  K F
Sbjct: 664 NMLTENNPSGKISKDF 679

[Close]

BLAST of CsaV3_4G023860 vs. NCBI nr
Match: XP_016900756.1 (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 288.1 bits (736), Expect = 2.2e-74
Identity = 138/175 (78.86%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKEWRFDLQGLPYDLVHRGMAETKK 60
           MRINANARK LI AGGIIE TFS A +S+ELSS AYKEWRFDLQGLP DLVHRGMAE K 
Sbjct: 143 MRINANARKNLISAGGIIEDTFSTASYSVELSSLAYKEWRFDLQGLPDDLVHRGMAERKT 202

Query: 61  DAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWKE 120
           D    +V + LTIKDYPFANDGL LW+ALW+WVT+YVNHYY    NAV ND+ELQAWWKE
Sbjct: 203 DPSGRDVFE-LTIKDYPFANDGLLLWDALWQWVTKYVNHYYADAENAVINDEELQAWWKE 262

Query: 121 IKDKGHPDIKEGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDP 176
           I+DKGHPDIKEGWPKLETKE LIKIASTIAWVGSGHHAS+NFLQYAYG   P  P
Sbjct: 263 IQDKGHPDIKEGWPKLETKEHLIKIASTIAWVGSGHHASVNFLQYAYGGYIPNRP 316

[Close]

BLAST of CsaV3_4G023860 vs. NCBI nr
Match: XP_004142238.2 (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 8.8e-71
Identity = 131/177 (74.01%), Postives = 148/177 (83.62%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKEWRFDLQGLPYDLVHRGMAETKK 60
           MRINANARK LI AGGIIE  FSAA +S+ELSSSAYKEWRFD+Q LP DL+HRGMAE K+
Sbjct: 518 MRINANARKNLINAGGIIENAFSAASYSVELSSSAYKEWRFDMQALPEDLIHRGMAERKR 577

Query: 61  DAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWKE 120
           D+E  +V++ LTIKDYPFANDGL LWNAL EWVTEYVNHYY  + NAV ND ELQAWW E
Sbjct: 578 DSEGRDVLE-LTIKDYPFANDGLLLWNALLEWVTEYVNHYYGDEENAVINDTELQAWWGE 637

Query: 121 IKDKGHPDIKEGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVL 178
           I++KGHPD +EGW  L T++DLIKIASTIAWVGSGHHAS+NFLQYAYG   P  P +
Sbjct: 638 IQEKGHPDKREGWFALRTRDDLIKIASTIAWVGSGHHASVNFLQYAYGGYMPNRPTI 693

[Close]

BLAST of CsaV3_4G023860 vs. NCBI nr
Match: XP_011653578.1 (PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 8.8e-71
Identity = 131/177 (74.01%), Postives = 147/177 (83.05%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKEWRFDLQGLPYDLVHRGMAETKK 60
           MRINANARK LI A GIIE  FS A +S+ELSSSAYK WRFD Q LP DL+HRGMAE K+
Sbjct: 516 MRINANARKNLINARGIIENAFSGASYSVELSSSAYKAWRFDEQALPEDLIHRGMAERKR 575

Query: 61  DAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWKE 120
           D+E  +V++ LTIKDYPFANDGL LWNAL EWVTEYVNHYY  + NAVTNDKELQAWW E
Sbjct: 576 DSEGRDVLE-LTIKDYPFANDGLLLWNALLEWVTEYVNHYYGDEENAVTNDKELQAWWGE 635

Query: 121 IKDKGHPDIKEGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVL 178
           I++KGHPD +EGWP L T++DLIKIASTIAWVGSGHHAS+NFLQYAYG   P  P +
Sbjct: 636 IQEKGHPDKREGWPALRTRDDLIKIASTIAWVGSGHHASVNFLQYAYGGYMPNRPTI 691

[Close]

BLAST of CsaV3_4G023860 vs. NCBI nr
Match: XP_008449947.1 (PREDICTED: lipoxygenase 2, chloroplastic-like, partial [Cucumis melo])

HSP 1 Score: 275.0 bits (702), Expect = 2.0e-70
Identity = 133/175 (76.00%), Postives = 144/175 (82.29%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKEWRFDLQGLPYDLVHRGMAETKK 60
           MRINANARK LI AGGIIE TFSAA +S+ELSSSAYKEWRFD Q LP DL+HRGMAE K 
Sbjct: 294 MRINANARKNLINAGGIIERTFSAASYSVELSSSAYKEWRFDKQALPEDLIHRGMAEIKT 353

Query: 61  DAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWKE 120
           D+   +V + LTIKDYPFANDGL LWNAL EWVTEYVNHYY  D  AV NDKELQAWW+E
Sbjct: 354 DSSGRDVFE-LTIKDYPFANDGLLLWNALLEWVTEYVNHYYGDDKYAVKNDKELQAWWEE 413

Query: 121 IKDKGHPDIKEGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDP 176
           I+ KGHPD K GWP L T++DLIKIASTIAWVGSGHHAS+NFLQYAYG   P  P
Sbjct: 414 IQKKGHPDKKTGWPALRTRDDLIKIASTIAWVGSGHHASVNFLQYAYGGYMPNRP 467

[Close]

BLAST of CsaV3_4G023860 vs. TAIR10
Match: AT3G45140.1 (lipoxygenase 2)

HSP 1 Score: 199.1 bits (505), Expect = 2.5e-51
Identity = 99/178 (55.62%), Postives = 127/178 (71.35%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAY-KEWRFDLQGLPYDLVHRGMAETK 60
           M INA AR+ L+  GGIIE  F    +++ELSS+ Y K WRFD +GLP DL+ RG+AE  
Sbjct: 591 MEINARARQSLVNGGGIIETCFWPGKYALELSSAVYGKLWRFDQEGLPADLIKRGLAEED 650

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
           K AE H V  +LTI DYPFANDGL LW+A+ EWVT+YV HYY  D   +T+D+ELQ WW 
Sbjct: 651 KTAE-HGV--RLTIPDYPFANDGLILWDAIKEWVTDYVKHYYP-DEELITSDEELQGWWS 710

Query: 121 EIKDKGHPDIKE--GWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDP 176
           E+++ GH D K+   WP L+T++DLI + +TIAWV SGHHA++NF QY YG  +P  P
Sbjct: 711 EVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRP 764

[Close]

BLAST of CsaV3_4G023860 vs. TAIR10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 193.0 bits (489), Expect = 1.8e-49
Identity = 98/191 (51.31%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKE-WRFDLQGLPYDLVHRGMAETK 60
           + INA ARK LI  GGIIE  F+   ++MELSS+AYK  WRFD++GLP DLV RGMAE  
Sbjct: 612 LEINARARKSLINGGGIIESCFTPGKYAMELSSAAYKSMWRFDMEGLPADLVRRGMAEED 671

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
             AEC     +L I DYP+A DGL +W A+ + V  YV H+Y  D  ++T+D ELQAWW 
Sbjct: 672 SSAECGV---RLVIDDYPYAADGLLIWKAIKDLVESYVKHFYS-DSKSITSDLELQAWWD 731

Query: 121 EIKDKGHPDIKE--GWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVL 180
           EIK+KGH D K+   WPKL T +DL +I + + W+ SG HA+INF QY +G   P  P L
Sbjct: 732 EIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTL 791

Query: 181 QGPTCSQRTTP 189
                 Q T P
Sbjct: 792 LRKLIPQETDP 798

[Close]

BLAST of CsaV3_4G023860 vs. TAIR10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 174.9 bits (442), Expect = 5.0e-44
Identity = 91/197 (46.19%), Postives = 123/197 (62.44%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYK-EWRFDLQGLPYDLVHRGMAETK 60
           + INA AR+ LI A G+IE  F+A  + +E+SS+AYK +WRFD++GLP DL+ RGMA   
Sbjct: 622 LEINAVARQTLISADGVIESCFTAGQYGLEISSAAYKNKWRFDMEGLPADLIRRGMA-VP 681

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
              + H +  KL ++DYP+ANDGL LW+A+  WV  YV  YY  + N +  D ELQAW+ 
Sbjct: 682 DPTQPHGL--KLLVEDYPYANDGLLLWSAIQTWVRTYVERYY-ANSNLIQTDTELQAWYS 741

Query: 121 EIKDKGHPDIK--EGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVL 180
           E  + GH D +  E WPKL T EDL+ + +TI W+ S  HA++NF QY YG   P  P L
Sbjct: 742 ESINVGHADHRDAEWWPKLSTVEDLVSVITTIIWLASAQHAALNFGQYPYGGYVPNRPPL 801

Query: 181 QGPTCSQRTTPVEKFPK 195
                 +R  P E  P+
Sbjct: 802 M-----RRLIPDESDPE 809

[Close]

BLAST of CsaV3_4G023860 vs. TAIR10
Match: AT1G17420.1 (lipoxygenase 3)

HSP 1 Score: 172.2 bits (435), Expect = 3.2e-43
Identity = 89/197 (45.18%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYK-EWRFDLQGLPYDLVHRGMAETK 60
           + INA AR+ LI A G+IEG F+A  + ME+S++AYK  WRFD++GLP DL+ RGMA   
Sbjct: 615 LEINALARQSLISADGVIEGGFTAGAYGMEMSAAAYKSSWRFDMEGLPADLIRRGMA-IP 674

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
              + H +  KL I+DYP+ANDGL LW+A+  WV  YV  YY  + N +  D ELQ+W+ 
Sbjct: 675 DATQPHGL--KLLIEDYPYANDGLLLWSAIQTWVRTYVERYYP-NPNLIKTDSELQSWYS 734

Query: 121 EIKDKGHPDIKEG--WPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVL 180
           E  + GH D+++   WP+L T +DL+ I +T+ W+ S  HA++NF QY YG   P  P L
Sbjct: 735 ESINVGHADLRDADWWPELSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPL 794

Query: 181 QGPTCSQRTTPVEKFPK 195
                 +R  P E  P+
Sbjct: 795 M-----RRLIPDESDPE 802

[Close]

BLAST of CsaV3_4G023860 vs. TAIR10
Match: AT1G55020.1 (lipoxygenase 1)

HSP 1 Score: 155.2 bits (391), Expect = 4.1e-38
Identity = 82/191 (42.93%), Postives = 116/191 (60.73%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYK-EWRFDLQGLPYDLVHRGMAETK 60
           M INA AR+ILI  GGI E T   + ++ME+SS  YK  W F  Q LP +L  RGMA   
Sbjct: 556 MNINALARQILINGGGIFEITVFPSKYAMEMSSFIYKNHWTFPDQALPAELKKRGMAVED 615

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
            +A  H +  +L IKDYP+A DGL++W A+  WV +Y+  +YK + + +  D ELQAWWK
Sbjct: 616 PEAP-HGL--RLRIKDYPYAVDGLEVWYAIESWVRDYIFLFYKIEED-IQTDTELQAWWK 675

Query: 121 EIKDKGHPDIKE--GWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVL 180
           E++++GH D K    WPK++T+E+L++  + I WV S  HA++NF QY      P  P +
Sbjct: 676 EVREEGHGDKKSEPWWPKMQTREELVESCTIIIWVASALHAAVNFGQYPVAGYLPNRPTI 735

Query: 181 QGPTCSQRTTP 189
                 +  TP
Sbjct: 736 SRQYMPKENTP 742

[Close]

BLAST of CsaV3_4G023860 vs. Swiss-Prot
Match: sp|P38418|LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.5e-50
Identity = 99/178 (55.62%), Postives = 127/178 (71.35%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAY-KEWRFDLQGLPYDLVHRGMAETK 60
           M INA AR+ L+  GGIIE  F    +++ELSS+ Y K WRFD +GLP DL+ RG+AE  
Sbjct: 591 MEINARARQSLVNGGGIIETCFWPGKYALELSSAVYGKLWRFDQEGLPADLIKRGLAEED 650

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
           K AE H V  +LTI DYPFANDGL LW+A+ EWVT+YV HYY  D   +T+D+ELQ WW 
Sbjct: 651 KTAE-HGV--RLTIPDYPFANDGLILWDAIKEWVTDYVKHYYP-DEELITSDEELQGWWS 710

Query: 121 EIKDKGHPDIKE--GWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDP 176
           E+++ GH D K+   WP L+T++DLI + +TIAWV SGHHA++NF QY YG  +P  P
Sbjct: 711 EVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRP 764

[Close]

BLAST of CsaV3_4G023860 vs. Swiss-Prot
Match: sp|Q9CAG3|LOX6_ARATH (Lipoxygenase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX6 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.2e-48
Identity = 98/191 (51.31%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKE-WRFDLQGLPYDLVHRGMAETK 60
           + INA ARK LI  GGIIE  F+   ++MELSS+AYK  WRFD++GLP DLV RGMAE  
Sbjct: 612 LEINARARKSLINGGGIIESCFTPGKYAMELSSAAYKSMWRFDMEGLPADLVRRGMAEED 671

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
             AEC     +L I DYP+A DGL +W A+ + V  YV H+Y  D  ++T+D ELQAWW 
Sbjct: 672 SSAECGV---RLVIDDYPYAADGLLIWKAIKDLVESYVKHFYS-DSKSITSDLELQAWWD 731

Query: 121 EIKDKGHPDIKE--GWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVL 180
           EIK+KGH D K+   WPKL T +DL +I + + W+ SG HA+INF QY +G   P  P L
Sbjct: 732 EIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTL 791

Query: 181 QGPTCSQRTTP 189
                 Q T P
Sbjct: 792 LRKLIPQETDP 798

[Close]

BLAST of CsaV3_4G023860 vs. Swiss-Prot
Match: sp|Q8GSM3|LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-47
Identity = 92/197 (46.70%), Postives = 131/197 (66.50%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAY-KEWRFDLQGLPYDLVHRGMAETK 60
           M INA AR +LICA GIIE TFS    SME+SS+AY K+WRFD++ LP DL+ RGMA   
Sbjct: 625 MEINAQARGMLICADGIIEKTFSPGEFSMEISSAAYDKQWRFDMEALPEDLIRRGMAVRG 684

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
           +D +      +L I+DYP+ANDGL +W+A+ +W ++YV HYY C ++ + +D+ELQ WW 
Sbjct: 685 EDGKL-----ELAIEDYPYANDGLLVWDAIKQWASDYVAHYYPCAVD-IVDDEELQDWWT 744

Query: 121 EIKDKGHPDIKE--GWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVL 180
           E++ KGHPD ++   WP+L+  E L+++ +TI WV S HHA++NF QY      P     
Sbjct: 745 EVRTKGHPDKQDEPWWPELDCHESLVQVLATIMWVTSAHHAAVNFGQYPMAGYVPNH--- 804

Query: 181 QGPTCSQRTTPVEKFPK 195
             P+ ++R  P E  P+
Sbjct: 805 --PSIARRNMPCEMGPE 810

[Close]

BLAST of CsaV3_4G023860 vs. Swiss-Prot
Match: sp|P38419|LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 6.7e-46
Identity = 99/194 (51.03%), Postives = 127/194 (65.46%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAY-KEWRFDLQGLPYDLVHRGMAETK 60
           MRINA AR  LI AGGIIE +FS   +SMELSS AY K WRFD + LP DLV RGMAE  
Sbjct: 618 MRINARARSALISAGGIIERSFSPQKYSMELSSVAYDKLWRFDTEALPADLVRRGMAEED 677

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
             AE H +  KL I+DYPFANDGL +W+A+  WV  YV  +Y  D ++V  D+ELQA+W 
Sbjct: 678 PTAE-HGL--KLAIEDYPFANDGLLIWDAIKTWVQAYVARFYP-DADSVAGDEELQAFWT 737

Query: 121 EIKDKGHPDIKEG--WPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVL 180
           E++ KGH D K+   WPKL++ E L    +TI WV + HHA++NF QY +G  +P     
Sbjct: 738 EVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFP----- 797

Query: 181 QGPTCSQRTTPVEK 192
             P+ ++   PVE+
Sbjct: 798 NRPSIARTVMPVEE 802

[Close]

BLAST of CsaV3_4G023860 vs. Swiss-Prot
Match: sp|P93184|LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-45
Identity = 91/193 (47.15%), Postives = 126/193 (65.28%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAY-KEWRFDLQGLPYDLVHRGMAETK 60
           M INA AR +LI AGGIIEG+F    +S+ELSS AY ++WRFD++ LP DL+ RGMA   
Sbjct: 624 MEINAQARAMLINAGGIIEGSFVPGEYSLELSSVAYDQQWRFDMEALPEDLIRRGMAVRN 683

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
            + E      +L I+DYP+ANDGL +W+A+ +W   YV HYY C  + + +D+ELQAWW 
Sbjct: 684 PNGEL-----ELAIEDYPYANDGLLVWDAIKQWALTYVQHYYPCAAD-IVDDEELQAWWT 743

Query: 121 EIKDKGHPDIKE--GWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVL 180
           E++ KGH D ++   WP+L++ E+L +  +TI WV SGHHA++NF QY      P     
Sbjct: 744 EVRTKGHADKQDEPWWPELDSHENLAQTLATIMWVTSGHHAAVNFGQYPMAGYIP----- 803

Query: 181 QGPTCSQRTTPVE 191
             PT ++R  P E
Sbjct: 804 NRPTMARRNMPTE 805

[Close]

BLAST of CsaV3_4G023860 vs. TrEMBL
Match: tr|A0A1S4DXP8|A0A1S4DXP8_CUCME (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC107990326 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.5e-74
Identity = 138/175 (78.86%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKEWRFDLQGLPYDLVHRGMAETKK 60
           MRINANARK LI AGGIIE TFS A +S+ELSS AYKEWRFDLQGLP DLVHRGMAE K 
Sbjct: 143 MRINANARKNLISAGGIIEDTFSTASYSVELSSLAYKEWRFDLQGLPDDLVHRGMAERKT 202

Query: 61  DAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWKE 120
           D    +V + LTIKDYPFANDGL LW+ALW+WVT+YVNHYY    NAV ND+ELQAWWKE
Sbjct: 203 DPSGRDVFE-LTIKDYPFANDGLLLWDALWQWVTKYVNHYYADAENAVINDEELQAWWKE 262

Query: 121 IKDKGHPDIKEGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDP 176
           I+DKGHPDIKEGWPKLETKE LIKIASTIAWVGSGHHAS+NFLQYAYG   P  P
Sbjct: 263 IQDKGHPDIKEGWPKLETKEHLIKIASTIAWVGSGHHASVNFLQYAYGGYIPNRP 316

[Close]

BLAST of CsaV3_4G023860 vs. TrEMBL
Match: tr|A0A1S3BNU6|A0A1S3BNU6_CUCME (lipoxygenase 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491676 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.3e-70
Identity = 133/175 (76.00%), Postives = 144/175 (82.29%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYKEWRFDLQGLPYDLVHRGMAETKK 60
           MRINANARK LI AGGIIE TFSAA +S+ELSSSAYKEWRFD Q LP DL+HRGMAE K 
Sbjct: 294 MRINANARKNLINAGGIIERTFSAASYSVELSSSAYKEWRFDKQALPEDLIHRGMAEIKT 353

Query: 61  DAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWKE 120
           D+   +V + LTIKDYPFANDGL LWNAL EWVTEYVNHYY  D  AV NDKELQAWW+E
Sbjct: 354 DSSGRDVFE-LTIKDYPFANDGLLLWNALLEWVTEYVNHYYGDDKYAVKNDKELQAWWEE 413

Query: 121 IKDKGHPDIKEGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDP 176
           I+ KGHPD K GWP L T++DLIKIASTIAWVGSGHHAS+NFLQYAYG   P  P
Sbjct: 414 IQKKGHPDKKTGWPALRTRDDLIKIASTIAWVGSGHHASVNFLQYAYGGYMPNRP 467

[Close]

BLAST of CsaV3_4G023860 vs. TrEMBL
Match: tr|A0A1S3BNQ1|A0A1S3BNQ1_CUCME (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491544 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 6.0e-68
Identity = 128/176 (72.73%), Postives = 143/176 (81.25%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYK-EWRFDLQGLPYDLVHRGMAETK 60
           MRINANAR+ LI AGGIIEGTFS A +SMELSSS Y+ +WRFD Q  P DL+ RGMAE K
Sbjct: 524 MRINANARESLINAGGIIEGTFSTASYSMELSSSVYRDQWRFDEQAFPEDLIRRGMAERK 583

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
           KD    ++++ LTIKDYPFANDGL LWNAL EWVTEYVNHYY  D NAV NDKELQAWW 
Sbjct: 584 KDEYGRDILE-LTIKDYPFANDGLILWNALLEWVTEYVNHYYGDDENAVINDKELQAWWN 643

Query: 121 EIKDKGHPDIKEGWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDP 176
           EI++KGHPD KEGWP L+T+ DLIKIASTIAWVGSGHHAS+NF+QYAY    P  P
Sbjct: 644 EIQEKGHPDKKEGWPTLKTRNDLIKIASTIAWVGSGHHASVNFIQYAYAGYTPNRP 698

[Close]

BLAST of CsaV3_4G023860 vs. TrEMBL
Match: tr|A0A1S4DXN4|A0A1S4DXN4_CUCME (linoleate 13S-lipoxygenase 2-1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107990336 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.6e-57
Identity = 116/178 (65.17%), Postives = 135/178 (75.84%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAY-KEWRFDLQGLPYDLVHRGMAETK 60
           MRINANAR+ILI AGGIIE TFSA  + ME SS  Y KEW+FD Q LP DL+ RGMAE +
Sbjct: 400 MRINANAREILINAGGIIESTFSARGYCMEFSSLVYKKEWQFDTQALPEDLIRRGMAE-R 459

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
            D   H +  KL IKDYPFANDGL LW AL EW+TEYVNHYY  D  A+ NDKEL+AWW 
Sbjct: 460 DDKAPHGL--KLAIKDYPFANDGLILWEALVEWMTEYVNHYYP-DDKAIKNDKELEAWWN 519

Query: 121 EIKDKGHPDIKE--GWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDP 176
           EIK+KGHPD K   GWP LET +DLI+I STIAWVG GHH+++NF+QYA+   +P+ P
Sbjct: 520 EIKEKGHPDKKNEAGWPTLETPKDLIQIVSTIAWVGCGHHSAVNFIQYAHAGYFPSRP 573

[Close]

BLAST of CsaV3_4G023860 vs. TrEMBL
Match: tr|A0A1S4DXQ4|A0A1S4DXQ4_CUCME (linoleate 13S-lipoxygenase 2-1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107991017 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 4.8e-57
Identity = 118/195 (60.51%), Postives = 140/195 (71.79%), Query Frame = 0


Query: 1   MRINANARKILICAGGIIEGTFSAAYHSMELSSSAYK-EWRFDLQGLPYDLVHRGMAETK 60
           MRINANAR+ LI AGGIIE TFSA  +SME SS  YK EW+FD Q LP DL+ RGMAE  
Sbjct: 1   MRINANARETLINAGGIIESTFSARGYSMEFSSFVYKREWQFDSQALPEDLIRRGMAERD 60

Query: 61  KDAECHEVIDKLTIKDYPFANDGLQLWNALWEWVTEYVNHYYKCDMNAVTNDKELQAWWK 120
           + A  H +  KL IKDYPFANDGL LW AL EW+TEYVNHYY  D  A+ NDKEL+AWW 
Sbjct: 61  EKAP-HGL--KLAIKDYPFANDGLILWEALVEWMTEYVNHYYP-DDKAIKNDKELEAWWN 120

Query: 121 EIKDKGHPDIKE--GWPKLETKEDLIKIASTIAWVGSGHHASINFLQYAYGAIYPTDPVL 180
           EI++KGHPD K   GWP LET  DLI+I STIAWVG GHH+++NF+QYA+   +P+    
Sbjct: 121 EIQEKGHPDKKNEAGWPTLETPNDLIQIVSTIAWVGCGHHSAVNFIQYAHAGYFPS---- 180

Query: 181 QGPTCSQRTTPVEKF 193
             P+ ++   P E F
Sbjct: 181 -RPSIARTNMPTEDF 186

The following BLAST results are available for this feature:

BLAST of CsaV3_4G023860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654363.1	5.9e-99	88.27	PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sati...	[more]
XP_016900756.1	2.2e-74	78.86	PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo]	[more]
XP_004142238.2	8.8e-71	74.01	PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus]	[more]
XP_011653578.1	8.8e-71	74.01	PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sati...	[more]
XP_008449947.1	2.0e-70	76.00	PREDICTED: lipoxygenase 2, chloroplastic-like, partial [Cucumis melo]	[more]

BLAST of CsaV3_4G023860 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45140.1	2.5e-51	55.62	lipoxygenase 2	[more]
AT1G67560.1	1.8e-49	51.31	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G72520.1	5.0e-44	46.19	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G17420.1	3.2e-43	45.18	lipoxygenase 3	[more]
AT1G55020.1	4.1e-38	42.93	lipoxygenase 1	[more]

BLAST of CsaV3_4G023860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P38418\|LOX2_ARATH	4.5e-50	55.62	Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1	[more]
sp\|Q9CAG3\|LOX6_ARATH	3.2e-48	51.31	Lipoxygenase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX6 PE=2 SV=1	[more]
sp\|Q8GSM3\|LOX22_HORVU	1.6e-47	46.70	Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.2 PE=1 SV=1	[more]
sp\|P38419\|LOXC1_ORYSJ	6.7e-46	51.03	Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX...	[more]
sp\|P93184\|LOX21_HORVU	1.9e-45	47.15	Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.1 PE=1 SV=1	[more]

BLAST of CsaV3_4G023860 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DXP8\|A0A1S4DXP8_CUCME	1.5e-74	78.86	Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC107990326 PE=3 SV=1	[more]
tr\|A0A1S3BNU6\|A0A1S3BNU6_CUCME	1.3e-70	76.00	lipoxygenase 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491676 PE=3 ...	[more]
tr\|A0A1S3BNQ1\|A0A1S3BNQ1_CUCME	6.0e-68	72.73	Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491544 PE=3 SV=1	[more]
tr\|A0A1S4DXN4\|A0A1S4DXN4_CUCME	1.6e-57	65.17	linoleate 13S-lipoxygenase 2-1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A1S4DXQ4\|A0A1S4DXQ4_CUCME	4.8e-57	60.51	linoleate 13S-lipoxygenase 2-1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LO...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR036226	LipOase_C_sf
IPR000907	LipOase
IPR013819	LipOase_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G023860.1	CsaV3_4G023860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013819	Lipoxygenase, C-terminal	PFAM	PF00305	Lipoxygenase	coord: 1..178 e-value: 3.3E-73 score: 247.2
IPR013819	Lipoxygenase, C-terminal	PROSITE	PS51393	LIPOXYGENASE_3	coord: 1..196 score: 62.892
None	No IPR available	GENE3D	G3DSA:1.20.245.10		coord: 1..195 e-value: 9.0E-64 score: 217.8
None	No IPR available	PANTHER	PTHR11771:SF89	LIPOXYGENASE 2, CHLOROPLASTIC	coord: 1..177
IPR000907	Lipoxygenase	PANTHER	PTHR11771	LIPOXYGENASE	coord: 1..177
IPR036226	Lipoxigenase, C-terminal domain superfamily	SUPERFAMILY	SSF48484	Lipoxigenase	coord: 1..177

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G023860	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G023860	Cucurbita maxima (Rimu)	cmacucB0660
CsaV3_4G023860	Cucurbita maxima (Rimu)	cmacucB0726
CsaV3_4G023860	Cucurbita moschata (Rifu)	cmocucB0645
CsaV3_4G023860	Cucurbita moschata (Rifu)	cmocucB0713
CsaV3_4G023860	Cucurbita pepo (Zucchini)	cpecucB0346
CsaV3_4G023860	Cucurbita pepo (Zucchini)	cpecucB0908
CsaV3_4G023860	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G023860	Bottle gourd (USVL1VR-Ls)	cuclsiB269
CsaV3_4G023860	Melon (DHL92) v3.5.1	cucmeB294
CsaV3_4G023860	Melon (DHL92) v3.6.1	cucmedB286
CsaV3_4G023860	Watermelon (Charleston Gray)	cucwcgB305
CsaV3_4G023860	Watermelon (97103) v1	cucwmB364
CsaV3_4G023860	Watermelon (97103) v2	cucwmbB293
CsaV3_4G023860	Wax gourd	cucwgoB396
CsaV3_4G023860	Silver-seed gourd	carcucB0559
CsaV3_4G023860	Silver-seed gourd	carcucB0960