CsaV3_4G023500 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G023500
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Dirigent protein
Location	chr4 : 13695399 .. 13695986 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGAATCTCTCCCATCTCCACCACCCACTTCCTCTTTCTCTCTTTCCTCCTCTTCTCTGCCGTAGCTTTGGCTGTAGCTGAAGATCAAAATTCCTTTGCAAGAACAGTGAACAGGAAACGGCTGGGTCTTAGAAAAGAGAAGCTCAGCCACTTCCGTTTCTACTGGCACGACGTTCTAACTGGAAAATACCCAACCTCAATCCAAATCGTTCCCCCTGCTTCGAACACTTCAATGACTGGATTCGGTTTGGTTAACATGATCGACAACCCATTAACAGAAACTCCAGATCCCAAGTCCAAACTATGGGGAAGAGCACAGGGATTGTACGCGTCAGCTTCGCAAGACCAGTTTGGGTTGTTAATGGCGATGAACTTCGCGTTTGTGAGTGGGAAATACAACGGAAGCTCCCTCACTATATTTGGAAGAAACCCATTTTTGGAGAAAGTGAGAGAGATGCCTGTGATCGGTGGAAGTGGGCTGTTCAGATTTGCGAGAGGGTATGCAAAAGCCACAACCAATAAGGTTGATTTCAAAACAGGAGATGCTGTTGTTGAATATAACATTTACGTACTTCACTATTGA

mRNA sequence

ATGGCTGGAATCTCTCCCATCTCCACCACCCACTTCCTCTTTCTCTCTTTCCTCCTCTTCTCTGCCGTAGCTTTGGCTGTAGCTGAAGATCAAAATTCCTTTGCAAGAACAGTGAACAGGAAACGGCTGGGTCTTAGAAAAGAGAAGCTCAGCCACTTCCGTTTCTACTGGCACGACGTTCTAACTGGAAAATACCCAACCTCAATCCAAATCGTTCCCCCTGCTTCGAACACTTCAATGACTGGATTCGGTTTGGTTAACATGATCGACAACCCATTAACAGAAACTCCAGATCCCAAGTCCAAACTATGGGGAAGAGCACAGGGATTGTACGCGTCAGCTTCGCAAGACCAGTTTGGGTTGTTAATGGCGATGAACTTCGCGTTTGTGAGTGGGAAATACAACGGAAGCTCCCTCACTATATTTGGAAGAAACCCATTTTTGGAGAAAGTGAGAGAGATGCCTGTGATCGGTGGAAGTGGGCTGTTCAGATTTGCGAGAGGGTATGCAAAAGCCACAACCAATAAGGTTGATTTCAAAACAGGAGATGCTGTTGTTGAATATAACATTTACGTACTTCACTATTGA

Coding sequence (CDS)

ATGGCTGGAATCTCTCCCATCTCCACCACCCACTTCCTCTTTCTCTCTTTCCTCCTCTTCTCTGCCGTAGCTTTGGCTGTAGCTGAAGATCAAAATTCCTTTGCAAGAACAGTGAACAGGAAACGGCTGGGTCTTAGAAAAGAGAAGCTCAGCCACTTCCGTTTCTACTGGCACGACGTTCTAACTGGAAAATACCCAACCTCAATCCAAATCGTTCCCCCTGCTTCGAACACTTCAATGACTGGATTCGGTTTGGTTAACATGATCGACAACCCATTAACAGAAACTCCAGATCCCAAGTCCAAACTATGGGGAAGAGCACAGGGATTGTACGCGTCAGCTTCGCAAGACCAGTTTGGGTTGTTAATGGCGATGAACTTCGCGTTTGTGAGTGGGAAATACAACGGAAGCTCCCTCACTATATTTGGAAGAAACCCATTTTTGGAGAAAGTGAGAGAGATGCCTGTGATCGGTGGAAGTGGGCTGTTCAGATTTGCGAGAGGGTATGCAAAAGCCACAACCAATAAGGTTGATTTCAAAACAGGAGATGCTGTTGTTGAATATAACATTTACGTACTTCACTATTGA

Protein sequence

MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDVLTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFGLLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFKTGDAVVEYNIYVLHY

Homology

[Close]

BLAST of CsaV3_4G023500 vs. NCBI nr
Match: XP_004142156.1 (PREDICTED: dirigent protein 19-like [Cucumis sativus] >KGN54087.1 Dirigent-like protein 2 [Cucumis sativus])

HSP 1 Score: 394.4 bits (1012), Expect = 2.2e-106
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60
           MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV
Sbjct: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60

Query: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120
           LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG
Sbjct: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120

Query: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180
           LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK
Sbjct: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180

Query: 181 TGDAVVEYNIYVLHY 196
           TGDAVVEYNIYVLHY
Sbjct: 181 TGDAVVEYNIYVLHY 195

[Close]

BLAST of CsaV3_4G023500 vs. NCBI nr
Match: XP_008449789.1 (PREDICTED: dirigent protein 20-like [Cucumis melo])

HSP 1 Score: 367.9 bits (943), Expect = 2.2e-98
Identity = 180/195 (92.31%), Postives = 187/195 (95.90%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60
           MAGISPIS THFLFLSFLL S VALA+AED+ SFARTV RKRLGLRKEKLSHFR YWHDV
Sbjct: 1   MAGISPISATHFLFLSFLLSSVVALAIAEDEPSFARTVERKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120
           L+GKYPTSIQIVPP SNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQD+FG
Sbjct: 61  LSGKYPTSIQIVPPVSNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDKFG 120

Query: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180
           LLMAMNFAFVSGKYNGSSLTIFGRNPF+EKVREMPVIGGSGLFRFARGYA+A+T KVDFK
Sbjct: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFMEKVREMPVIGGSGLFRFARGYAEASTKKVDFK 180

Query: 181 TGDAVVEYNIYVLHY 196
           TGDAVVEYNIYVLHY
Sbjct: 181 TGDAVVEYNIYVLHY 195

[Close]

BLAST of CsaV3_4G023500 vs. NCBI nr
Match: XP_008449790.1 (PREDICTED: dirigent protein 7-like [Cucumis melo])

HSP 1 Score: 354.4 bits (908), Expect = 2.5e-94
Identity = 173/195 (88.72%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60
           MAGISPISTTHFLFLSFLLFSAVALA+AED+NSFARTV RKRLGLRKEKLSHFR YWHDV
Sbjct: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120
           L+GK PTSIQIVPP SNTSMT FG V MIDNPLTETPDPKSKLWGRA+GLYASASQ+  G
Sbjct: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120

Query: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180
           LLMAMNFAFVSGKYNGSS+T+FGRNPFLEKVREMPVIGGSGLFRFARGYAKA+T  +DF 
Sbjct: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180

Query: 181 TGDAVVEYNIYVLHY 196
           TGDAV+EYNIYVLHY
Sbjct: 181 TGDAVIEYNIYVLHY 195

[Close]

BLAST of CsaV3_4G023500 vs. NCBI nr
Match: XP_004142157.2 (PREDICTED: dirigent protein 7-like [Cucumis sativus] >KGN54086.1 hypothetical protein Csa_4G280630 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 2.4e-92
Identity = 171/195 (87.69%), Postives = 181/195 (92.82%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60
           MAGISPIS THFLFLSFLLFSA+ALA+AED+NSFARTVNRKRLGLRKEKLSHFR YWHDV
Sbjct: 1   MAGISPISPTHFLFLSFLLFSAIALAIAEDENSFARTVNRKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120
           L+GK PTS+QIVPP SNTSMT FG V MIDNPLTET D KSKLWGRA+GLYASASQD  G
Sbjct: 61  LSGKDPTSMQIVPPVSNTSMTRFGAVQMIDNPLTETADIKSKLWGRAEGLYASASQDGSG 120

Query: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180
           LLMAMNFAFVSGKYNGSS+TIFGRNPFLEKVREMPVIGGSGLFRFARGYAKA+T  +DF 
Sbjct: 121 LLMAMNFAFVSGKYNGSSITIFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180

Query: 181 TGDAVVEYNIYVLHY 196
           TGDAV+EYNIYVLHY
Sbjct: 181 TGDAVIEYNIYVLHY 195

[Close]

BLAST of CsaV3_4G023500 vs. NCBI nr
Match: XP_022153829.1 (dirigent protein 22-like [Momordica charantia])

HSP 1 Score: 312.8 bits (800), Expect = 8.4e-82
Identity = 150/195 (76.92%), Postives = 169/195 (86.67%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60
           MAGIS IS  HFL LS  +FSAVA A  ED++SF R+V+RK LGLRK+KLSHFR YWHD 
Sbjct: 1   MAGISSISAVHFLTLSLFVFSAVAFATPEDEDSFVRSVDRKLLGLRKQKLSHFRLYWHDT 60

Query: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120
           LTGK P+S++IVPP SN+S TGFG V MIDN LT  PDP+SKLWGRA+G YA+ASQ+  G
Sbjct: 61  LTGKNPSSVRIVPPVSNSSTTGFGFVQMIDNALTAGPDPRSKLWGRAEGFYAAASQENPG 120

Query: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180
           LLMAMNFAF SGKYNGSSLTIFGRNPF+EKVREMPVIGGSGLFRFARGYA+A T+K+DFK
Sbjct: 121 LLMAMNFAFFSGKYNGSSLTIFGRNPFMEKVREMPVIGGSGLFRFARGYAEARTSKIDFK 180

Query: 181 TGDAVVEYNIYVLHY 196
           TGDAV+EYNIYVLHY
Sbjct: 181 TGDAVIEYNIYVLHY 195

[Close]

BLAST of CsaV3_4G023500 vs. TAIR10
Match: AT1G58170.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 212.6 bits (540), Expect = 2.2e-55
Identity = 105/183 (57.38%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 14  FLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDVLTGKYPTSIQIV- 73
           FLSF L S+  LA+     +   T+    L  +KEKL+HFR YWHD++TG+  +S+ I+ 
Sbjct: 4   FLSFFLISSRTLALVLISVT-GETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMN 63

Query: 74  PPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFGLLMAMNFAFVSG 133
           PP   T  TGFGL+ MIDNPLT TP   SK+ GRAQG YA  S+++ GLLMAMNFA + G
Sbjct: 64  PPKKYTGATGFGLMRMIDNPLTLTPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDG 123

Query: 134 KYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFKTGDAVVEYNIYV 193
           KYNGS++T+ GRN   +KVREMPVIGGSGLFRFARGY +A+T++ + KTG+A+VEYN Y+
Sbjct: 124 KYNGSTITVLGRNSVFDKVREMPVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYL 183

Query: 194 LHY 196
           LHY
Sbjct: 184 LHY 185

[Close]

BLAST of CsaV3_4G023500 vs. TAIR10
Match: AT1G55210.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 208.8 bits (530), Expect = 3.1e-54
Identity = 103/183 (56.28%), Postives = 132/183 (72.13%), Query Frame = 0


Query: 14  FLSFLLFSAVALAVAEDQNSFARTVNRKRLGL-RKEKLSHFRFYWHDVLTGKYPTSIQIV 73
           FL+  +     ++ A D   FART++RK LGL +KEKL+HF+ YWHD+L+G  PTSI I 
Sbjct: 7   FLAVQILFLAVVSSAGDGEDFARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPTSIMIQ 66

Query: 74  PPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFGLLMAMNFAFVSG 133
           PP +N+S   FG ++MIDN LT      S + G+AQG YA A+Q + G LMAMNFAF +G
Sbjct: 67  PPVTNSSY--FGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTG 126

Query: 134 KYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFKTGDAVVEYNIYV 193
           KYNGS++TI GRN  L +VREMP++GGSGLFRFARGY +A T  ++ K GDA VEY+ YV
Sbjct: 127 KYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 186

Query: 194 LHY 196
           LHY
Sbjct: 187 LHY 187

[Close]

BLAST of CsaV3_4G023500 vs. TAIR10
Match: AT5G49040.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 203.4 bits (516), Expect = 1.3e-52
Identity = 105/185 (56.76%), Postives = 132/185 (71.35%), Query Frame = 0


Query: 13  LFLSFLLFSAVALAVAEDQNSFARTVNRKRLGL-RKEKLSHFRFYWHDVLTGKYPTSIQI 72
           L    LL +A ALA  ++   FART+NRK LGL +KEKL+H R YWHD++TG+ P+SI+I
Sbjct: 8   LTAQILLLTATALA-GKNGEDFARTINRKHLGLGKKEKLTHLRVYWHDIVTGRNPSSIRI 67

Query: 73  V-PPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFGLLMAMNFAFV 132
             P A  +S + FG + MIDN LT      S + G+AQG+Y  A+Q + GLLMAMN AF 
Sbjct: 68  QGPVAKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMNLAFK 127

Query: 133 SGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFKTGDAVVEYNI 192
           +GKYNGS++TI GRN  + KVREMPV+GGSG+FRFARGY +A T   D KTGDA VE N 
Sbjct: 128 TGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVESNC 187

Query: 193 YVLHY 196
           Y+LHY
Sbjct: 188 YILHY 191

[Close]

BLAST of CsaV3_4G023500 vs. TAIR10
Match: AT3G13650.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 200.3 bits (508), Expect = 1.1e-51
Identity = 102/183 (55.74%), Postives = 129/183 (70.49%), Query Frame = 0


Query: 13  LFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDVLTGKYPTSIQIV 72
           + ++ +L  A  ++  + +N FA+T+++K  GLRKEKL+HFR YWHD+L+G  P+S+ I 
Sbjct: 7   IIVTQILLIAAVVSARKGEN-FAKTIDKKHFGLRKEKLTHFRVYWHDILSGSNPSSVVIN 66

Query: 73  PPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFGLLMAMNFAFVSG 132
           PP SN+S   FG V +IDN LT      S L G+AQG+YA+  Q     LM MNFAF +G
Sbjct: 67  PPISNSSF--FGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTG 126

Query: 133 KYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFKTGDAVVEYNIYV 192
           KYNGSS+ I GRN  L KVREMPVIGGSGLFRFARGY +A T   D K+GDA VEY+ YV
Sbjct: 127 KYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 186

Query: 193 LHY 196
           LHY
Sbjct: 187 LHY 186

[Close]

BLAST of CsaV3_4G023500 vs. TAIR10
Match: AT1G65870.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-46
Identity = 89/189 (47.09%), Postives = 128/189 (67.72%), Query Frame = 0


Query: 7   ISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDVLTGKYP 66
           +++ + L L  L  + +  A   +  SF+ TV     G + +KL+H  FY+HD+++G  P
Sbjct: 1   MASLYLLLLLPLFLALILAATITESKSFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKP 60

Query: 67  TSIQIV-PPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFGLLMAM 126
           TS+Q+   P +N+S TGFGLV ++D+ LT  P+  S+  GRAQG+YASA Q++ GLLMA 
Sbjct: 61  TSVQVANGPTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAF 120

Query: 127 NFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFKTGDAV 186
           N  F  GK++ S++ ++GRNP L KVREMP+IGG+G FRF RGYA A T   +  +GDAV
Sbjct: 121 NLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAV 180

Query: 187 VEYNIYVLH 195
           VEYN+Y+ H
Sbjct: 181 VEYNVYIWH 189

[Close]

BLAST of CsaV3_4G023500 vs. Swiss-Prot
Match: sp|Q9C523|DIR19_ARATH (Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.9e-54
Identity = 105/183 (57.38%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 14  FLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDVLTGKYPTSIQIV- 73
           FLSF L S+  LA+     +   T+    L  +KEKL+HFR YWHD++TG+  +S+ I+ 
Sbjct: 4   FLSFFLISSRTLALVLISVT-GETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMN 63

Query: 74  PPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFGLLMAMNFAFVSG 133
           PP   T  TGFGL+ MIDNPLT TP   SK+ GRAQG YA  S+++ GLLMAMNFA + G
Sbjct: 64  PPKKYTGATGFGLMRMIDNPLTLTPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDG 123

Query: 134 KYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFKTGDAVVEYNIYV 193
           KYNGS++T+ GRN   +KVREMPVIGGSGLFRFARGY +A+T++ + KTG+A+VEYN Y+
Sbjct: 124 KYNGSTITVLGRNSVFDKVREMPVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYL 183

Query: 194 LHY 196
           LHY
Sbjct: 184 LHY 185

[Close]

BLAST of CsaV3_4G023500 vs. Swiss-Prot
Match: sp|Q9C891|DIR20_ARATH (Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.6e-53
Identity = 103/183 (56.28%), Postives = 132/183 (72.13%), Query Frame = 0


Query: 14  FLSFLLFSAVALAVAEDQNSFARTVNRKRLGL-RKEKLSHFRFYWHDVLTGKYPTSIQIV 73
           FL+  +     ++ A D   FART++RK LGL +KEKL+HF+ YWHD+L+G  PTSI I 
Sbjct: 7   FLAVQILFLAVVSSAGDGEDFARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPTSIMIQ 66

Query: 74  PPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFGLLMAMNFAFVSG 133
           PP +N+S   FG ++MIDN LT      S + G+AQG YA A+Q + G LMAMNFAF +G
Sbjct: 67  PPVTNSSY--FGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTG 126

Query: 134 KYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFKTGDAVVEYNIYV 193
           KYNGS++TI GRN  L +VREMP++GGSGLFRFARGY +A T  ++ K GDA VEY+ YV
Sbjct: 127 KYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 186

Query: 194 LHY 196
           LHY
Sbjct: 187 LHY 187

[Close]

BLAST of CsaV3_4G023500 vs. Swiss-Prot
Match: sp|Q9FI66|DIR3_ARATH (Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.4e-51
Identity = 105/185 (56.76%), Postives = 132/185 (71.35%), Query Frame = 0


Query: 13  LFLSFLLFSAVALAVAEDQNSFARTVNRKRLGL-RKEKLSHFRFYWHDVLTGKYPTSIQI 72
           L    LL +A ALA  ++   FART+NRK LGL +KEKL+H R YWHD++TG+ P+SI+I
Sbjct: 8   LTAQILLLTATALA-GKNGEDFARTINRKHLGLGKKEKLTHLRVYWHDIVTGRNPSSIRI 67

Query: 73  V-PPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFGLLMAMNFAFV 132
             P A  +S + FG + MIDN LT      S + G+AQG+Y  A+Q + GLLMAMN AF 
Sbjct: 68  QGPVAKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMNLAFK 127

Query: 133 SGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFKTGDAVVEYNI 192
           +GKYNGS++TI GRN  + KVREMPV+GGSG+FRFARGY +A T   D KTGDA VE N 
Sbjct: 128 TGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVESNC 187

Query: 193 YVLHY 196
           Y+LHY
Sbjct: 188 YILHY 191

[Close]

BLAST of CsaV3_4G023500 vs. Swiss-Prot
Match: sp|Q9LID5|DIR7_ARATH (Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-50
Identity = 102/183 (55.74%), Postives = 129/183 (70.49%), Query Frame = 0


Query: 13  LFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDVLTGKYPTSIQIV 72
           + ++ +L  A  ++  + +N FA+T+++K  GLRKEKL+HFR YWHD+L+G  P+S+ I 
Sbjct: 7   IIVTQILLIAAVVSARKGEN-FAKTIDKKHFGLRKEKLTHFRVYWHDILSGSNPSSVVIN 66

Query: 73  PPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFGLLMAMNFAFVSG 132
           PP SN+S   FG V +IDN LT      S L G+AQG+YA+  Q     LM MNFAF +G
Sbjct: 67  PPISNSSF--FGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTG 126

Query: 133 KYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFKTGDAVVEYNIYV 192
           KYNGSS+ I GRN  L KVREMPVIGGSGLFRFARGY +A T   D K+GDA VEY+ YV
Sbjct: 127 KYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 186

Query: 193 LHY 196
           LHY
Sbjct: 187 LHY 186

[Close]

BLAST of CsaV3_4G023500 vs. Swiss-Prot
Match: sp|Q9SS03|DIR21_ARATH (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-45
Identity = 89/189 (47.09%), Postives = 128/189 (67.72%), Query Frame = 0


Query: 7   ISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDVLTGKYP 66
           +++ + L L  L  + +  A   +  SF+ TV     G + +KL+H  FY+HD+++G  P
Sbjct: 1   MASLYLLLLLPLFLALILAATITESKSFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKP 60

Query: 67  TSIQIV-PPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFGLLMAM 126
           TS+Q+   P +N+S TGFGLV ++D+ LT  P+  S+  GRAQG+YASA Q++ GLLMA 
Sbjct: 61  TSVQVANGPTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAF 120

Query: 127 NFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFKTGDAV 186
           N  F  GK++ S++ ++GRNP L KVREMP+IGG+G FRF RGYA A T   +  +GDAV
Sbjct: 121 NLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAV 180

Query: 187 VEYNIYVLH 195
           VEYN+Y+ H
Sbjct: 181 VEYNVYIWH 189

[Close]

BLAST of CsaV3_4G023500 vs. TrEMBL
Match: tr|A0A0A0L0G5|A0A0A0L0G5_CUCSA (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_4G280640 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.5e-106
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60
           MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV
Sbjct: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60

Query: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120
           LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG
Sbjct: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120

Query: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180
           LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK
Sbjct: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180

Query: 181 TGDAVVEYNIYVLHY 196
           TGDAVVEYNIYVLHY
Sbjct: 181 TGDAVVEYNIYVLHY 195

[Close]

BLAST of CsaV3_4G023500 vs. TrEMBL
Match: tr|A0A1S3BNH6|A0A1S3BNH6_CUCME (Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103491573 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.5e-98
Identity = 180/195 (92.31%), Postives = 187/195 (95.90%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60
           MAGISPIS THFLFLSFLL S VALA+AED+ SFARTV RKRLGLRKEKLSHFR YWHDV
Sbjct: 1   MAGISPISATHFLFLSFLLSSVVALAIAEDEPSFARTVERKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120
           L+GKYPTSIQIVPP SNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQD+FG
Sbjct: 61  LSGKYPTSIQIVPPVSNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDKFG 120

Query: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180
           LLMAMNFAFVSGKYNGSSLTIFGRNPF+EKVREMPVIGGSGLFRFARGYA+A+T KVDFK
Sbjct: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFMEKVREMPVIGGSGLFRFARGYAEASTKKVDFK 180

Query: 181 TGDAVVEYNIYVLHY 196
           TGDAVVEYNIYVLHY
Sbjct: 181 TGDAVVEYNIYVLHY 195

[Close]

BLAST of CsaV3_4G023500 vs. TrEMBL
Match: tr|A0A1S3BNT1|A0A1S3BNT1_CUCME (Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103491574 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.7e-94
Identity = 173/195 (88.72%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60
           MAGISPISTTHFLFLSFLLFSAVALA+AED+NSFARTV RKRLGLRKEKLSHFR YWHDV
Sbjct: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120
           L+GK PTSIQIVPP SNTSMT FG V MIDNPLTETPDPKSKLWGRA+GLYASASQ+  G
Sbjct: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120

Query: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180
           LLMAMNFAFVSGKYNGSS+T+FGRNPFLEKVREMPVIGGSGLFRFARGYAKA+T  +DF 
Sbjct: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180

Query: 181 TGDAVVEYNIYVLHY 196
           TGDAV+EYNIYVLHY
Sbjct: 181 TGDAVIEYNIYVLHY 195

[Close]

BLAST of CsaV3_4G023500 vs. TrEMBL
Match: tr|A0A0A0L1S2|A0A0A0L1S2_CUCSA (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_4G280630 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.6e-92
Identity = 171/195 (87.69%), Postives = 181/195 (92.82%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60
           MAGISPIS THFLFLSFLLFSA+ALA+AED+NSFARTVNRKRLGLRKEKLSHFR YWHDV
Sbjct: 1   MAGISPISPTHFLFLSFLLFSAIALAIAEDENSFARTVNRKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120
           L+GK PTS+QIVPP SNTSMT FG V MIDNPLTET D KSKLWGRA+GLYASASQD  G
Sbjct: 61  LSGKDPTSMQIVPPVSNTSMTRFGAVQMIDNPLTETADIKSKLWGRAEGLYASASQDGSG 120

Query: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180
           LLMAMNFAFVSGKYNGSS+TIFGRNPFLEKVREMPVIGGSGLFRFARGYAKA+T  +DF 
Sbjct: 121 LLMAMNFAFVSGKYNGSSITIFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180

Query: 181 TGDAVVEYNIYVLHY 196
           TGDAV+EYNIYVLHY
Sbjct: 181 TGDAVIEYNIYVLHY 195

[Close]

BLAST of CsaV3_4G023500 vs. TrEMBL
Match: tr|A0A1Q3D7T8|A0A1Q3D7T8_CEPFO (Dirigent protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31941 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.3e-65
Identity = 125/195 (64.10%), Postives = 150/195 (76.92%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60
           MA +  + T+ F+ LS L    + L   E+Q S+ARTVNR++ GL+KEKLSHFR YWHDV
Sbjct: 6   MARVLHMLTSQFIVLSLLTLFTIILVKGENQ-SYARTVNRRQFGLKKEKLSHFRLYWHDV 65

Query: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120
           L G  PT++ +VPPASNTS T FG + MIDNPLTE P+  SKL G+AQG YASASQ + G
Sbjct: 66  LGGPNPTAVLVVPPASNTSTTAFGSIRMIDNPLTEEPEMSSKLIGKAQGFYASASQQEVG 125

Query: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180
            LMAMNFAFV GKYNGS++T+ GRN  L  VREMPVIGG+GLFRFARGY +A T+++DF 
Sbjct: 126 FLMAMNFAFVEGKYNGSTITVLGRNSVLSPVREMPVIGGTGLFRFARGYVEARTDRIDFN 185

Query: 181 TGDAVVEYNIYVLHY 196
           TGDA VEYN YVLHY
Sbjct: 186 TGDATVEYNCYVLHY 199

The following BLAST results are available for this feature:

BLAST of CsaV3_4G023500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142156.1	2.2e-106	100.00	PREDICTED: dirigent protein 19-like [Cucumis sativus] >KGN54087.1 Dirigent-like ...	[more]
XP_008449789.1	2.2e-98	92.31	PREDICTED: dirigent protein 20-like [Cucumis melo]	[more]
XP_008449790.1	2.5e-94	88.72	PREDICTED: dirigent protein 7-like [Cucumis melo]	[more]
XP_004142157.2	2.4e-92	87.69	PREDICTED: dirigent protein 7-like [Cucumis sativus] >KGN54086.1 hypothetical pr...	[more]
XP_022153829.1	8.4e-82	76.92	dirigent protein 22-like [Momordica charantia]	[more]

BLAST of CsaV3_4G023500 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G58170.1	2.2e-55	57.38	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G55210.1	3.1e-54	56.28	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT5G49040.1	1.3e-52	56.76	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT3G13650.1	1.1e-51	55.74	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G65870.1	1.1e-46	47.09	Disease resistance-responsive (dirigent-like protein) family protein	[more]

BLAST of CsaV3_4G023500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C523\|DIR19_ARATH	3.9e-54	57.38	Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1	[more]
sp\|Q9C891\|DIR20_ARATH	5.6e-53	56.28	Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1	[more]
sp\|Q9FI66\|DIR3_ARATH	2.4e-51	56.76	Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1	[more]
sp\|Q9LID5\|DIR7_ARATH	2.0e-50	55.74	Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1	[more]
sp\|Q9SS03\|DIR21_ARATH	1.9e-45	47.09	Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1	[more]

BLAST of CsaV3_4G023500 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L0G5\|A0A0A0L0G5_CUCSA	1.5e-106	100.00	Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_4G280640 PE=3 SV=1	[more]
tr\|A0A1S3BNH6\|A0A1S3BNH6_CUCME	1.5e-98	92.31	Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103491573 PE=3 SV=1	[more]
tr\|A0A1S3BNT1\|A0A1S3BNT1_CUCME	1.7e-94	88.72	Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103491574 PE=3 SV=1	[more]
tr\|A0A0A0L1S2\|A0A0A0L1S2_CUCSA	1.6e-92	87.69	Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_4G280630 PE=3 SV=1	[more]
tr\|A0A1Q3D7T8\|A0A1Q3D7T8_CEPFO	1.3e-65	64.10	Dirigent protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31941 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004265	Dirigent

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G023500.1	CsaV3_4G023500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004265	Dirigent protein	PFAM	PF03018	Dirigent	coord: 51..192 e-value: 6.1E-53 score: 178.6
None	No IPR available	PANTHER	PTHR21495:SF128	DIRIGENT PROTEIN 19-RELATED	coord: 13..194
None	No IPR available	PANTHER	PTHR21495	NUCLEOPORIN-RELATED	coord: 13..194

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G023500	Silver-seed gourd	carcucB0559
CsaV3_4G023500	Silver-seed gourd	carcucB0960
CsaV3_4G023500	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G023500	Cucumber (Gy14) v1	cgycucB231
CsaV3_4G023500	Cucumber (Gy14) v1	cgycucB364
CsaV3_4G023500	Cucurbita maxima (Rimu)	cmacucB0660
CsaV3_4G023500	Cucurbita maxima (Rimu)	cmacucB0726
CsaV3_4G023500	Cucurbita moschata (Rifu)	cmocucB0645
CsaV3_4G023500	Cucurbita moschata (Rifu)	cmocucB0713
CsaV3_4G023500	Cucurbita pepo (Zucchini)	cpecucB0346
CsaV3_4G023500	Cucurbita pepo (Zucchini)	cpecucB0908
CsaV3_4G023500	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G023500	Bottle gourd (USVL1VR-Ls)	cuclsiB269
CsaV3_4G023500	Melon (DHL92) v3.5.1	cucmeB294
CsaV3_4G023500	Melon (DHL92) v3.6.1	cucmedB286
CsaV3_4G023500	Watermelon (Charleston Gray)	cucwcgB305
CsaV3_4G023500	Watermelon (97103) v1	cucwmB308
CsaV3_4G023500	Watermelon (97103) v1	cucwmB364
CsaV3_4G023500	Watermelon (97103) v2	cucwmbB293
CsaV3_4G023500	Wax gourd	cucwgoB396