CsaV3_4G022030 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G022030
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	protein EARLY RESPONSIVE TO DEHYDRATION 15
Location	chr4 : 13121839 .. 13124277 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGAAAAGAAAAGAAAGGGCAAAATAGTAAATTAGAAAGAAAGATGGGCCAATGAATTTAGAGGTAGGAACGTGGCATGTTCCATTTCCCTTTATGATAAGGATTGGTGGAAGTCAACTAACAACGACCACGCGCTTTCTATCCCGACTCCACGCGCCTCATTTGGATACAAACTCTGTTTTTCTACTCCTATAAAATTGGCTTCTCTCCTTCAAATTCCTTTATCCCATTTGTGGACTTTCTTCAAATTCTTTCTCTCTCACGAAAAGGATAAGACTTCCAAATTTCCCACTCTTTTTTCCAACTCCCTCTCTCACACCTCTGGTAAATTTTTCTTCTCTAATTCTGTTGAATTTCGTCTCTTCTTTTCCGTTTTCCGTTTCCATCTCGAGAATACCGGAGGAATAGGATGACGGTGTTCATGAATTTCAAACCAAATTTTCGAATTAGATCTGTGCGTTTGGTGTTGCTTTAGATGCGGAGACTATGGCGGTGATGTTTGTGATTGTGAATCTGCGGGTTTTTTTTTTTTTTTTTTTTTTTTAATTGGATCGGGTTGTGGTTTCCTTTCATTTCTTGATCTGCGATCTGTGTGGTTTTCATTCGTTCAACAATGTTTAAATCTACTTGTTCTTCCTTGTTTTCTTTGCGATCTGATTTCTGGAGCCGGGTTTGGAAATCTTTGCGGACAGGGGAATTTCTTTCTTTTTTTTTTTTCGTATGTTTGAAATTTTGATTCGATTTATCTAGATTGGAGTTTCAATTACGCCTTCTCTTTTGTTCATCGGGATTTCTGATCTGTCAGATCCGAAATATTGTTATTGTTTCGTTTCTATACTAGGGTTTCATCATGTAAATTTCGGTGACTTCGATATGGTTGAATCCTAGTTTGGATCAGAAGAAGAATGCACTTAGGTTTTGATTTGATTGATCTGTATGACTGGAATCGGATTTGTTCTTAAATACTTATTCGTTTAGTTTTTGTTTTAAGCTTACAAACACGAAGTTTTGAAAACTAAAATAATTTATTCTTTAGAATCTCGTAAATCCAATCTTTTATGCATGATTTTGAGAACCAAATGATTATCAAACTGGGTTTAAGCAAGTTTTATGAACAGAATGAAATAGATTGCTCTACTTTTCTCATTTGTTGAAGTTTGTCCTCCATGTTCTATATTTTGTTGATGGTTGATTTTGTTTGTTGTTCTAAAGGTCCGTAGATCAGTTGTATAACTACATTCCAAAACAATGGCTCTAGCATCTGTTGAAGGAAGTTCAAAGCTAAACCCGAACGCCCCGCTTTTCATCCCAGCCGCATACCAGGTGGAGGATTTCTCCCCACAATGGTGGCAACTGGTGACAACCTCGACATGGTACCGTGATTACTGGCTGAGCCAACACCAAGAAGAGAGCGACTTCTACATAGATGGTGAAGGCGAAGATGATTTCAGCAATGACATTGCTGAATTCCTTCCAGAAGCGTTCGATCTTGATGCGAATGAAGAACTCCGTACCATGGAAGCTGAATTCGAGGAGTTCATTCAAGCTTCTCTTAATGAAGGGTATCACCCAGAGAAGTAGGTTGCCTTTTAAAAGCTGACCCAAAAAAGAACTTCCTTCGTTGATCAGCTTGCATTTTCAGGTTTTTACCATGTTGATAAGCATAAGAAGCAAAATCTGCAGGTTTTTCTTTTCTTTTTTTTTTCTTTCTTTCTTTTCTAAAGTAACTTGTGTACAAAGCAAAGTTGCTAGTTTTGCAACTTTTGCAAACCCCACTTGTTCATTATTGTGCATCTTACTTTACAAGTGTCCCAAAAAAGTGTAAAAAAAAAGGAACATAGCTTTTAATGAGAAAGAGATATTGATTCTCTAGGTTTTTATTTTTTTTATTATGATGGTGTATCACTTTCACTTGTTACATGTTTTCATATTATATAGTAGGATTGTGGAGTGAAATAGTAAATTTTATATTTTCTTTTGGAAAATGACAAAAGTGTTTTGAGATTAGGTAAGTGACGTTCAAAATATGATGTTTATCCACCTTCTTCACATTTCACAATGGTGGAAAATTTCTGGAAAATATCAAATGACCAAAATACCTAGCCAAACACAAAGAAACCAAATCATAACAATGAAGATTTACATTTTTTTTTAATTTCCATCAATTAAATAACAAATTACCAATTTTATTTTCACTACTTATGAACACATTATATTTTTCTTTATGTAATACAATATTTTATTAAGGGTTTTCGTTTCCAATAATAATAAAGAAAACTATTTAAGATAAAGATTAAAAAAAAAGTCACACTCATGATTTTACAAAAAAAAGTGTGAATAATTATATATATTACCAAGTTTCACAAAATAGTGTATTGTTTCATCGTATTAATTAATACGTTCATTTGCATTTTCTCTAAATTTTGGATCTCAT

mRNA sequence

ATGGCTCTAGCATCTGTTGAAGGAAGTTCAAAGCTAAACCCGAACGCCCCGCTTTTCATCCCAGCCGCATACCAGGTGGAGGATTTCTCCCCACAATGGTGGCAACTGGTGACAACCTCGACATGGTACCGTGATTACTGGCTGAGCCAACACCAAGAAGAGAGCGACTTCTACATAGATGGTGAAGGCGAAGATGATTTCAGCAATGACATTGCTGAATTCCTTCCAGAAGCGTTCGATCTTGATGCGAATGAAGAACTCCGTACCATGGAAGCTGAATTCGAGGAGTTCATTCAAGCTTCTCTTAATGAAGGGTATCACCCAGAGAAGTAG

Coding sequence (CDS)

ATGGCTCTAGCATCTGTTGAAGGAAGTTCAAAGCTAAACCCGAACGCCCCGCTTTTCATCCCAGCCGCATACCAGGTGGAGGATTTCTCCCCACAATGGTGGCAACTGGTGACAACCTCGACATGGTACCGTGATTACTGGCTGAGCCAACACCAAGAAGAGAGCGACTTCTACATAGATGGTGAAGGCGAAGATGATTTCAGCAATGACATTGCTGAATTCCTTCCAGAAGCGTTCGATCTTGATGCGAATGAAGAACTCCGTACCATGGAAGCTGAATTCGAGGAGTTCATTCAAGCTTCTCTTAATGAAGGGTATCACCCAGAGAAGTAG

Protein sequence

MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYIDGEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK

Homology

[Close]

BLAST of CsaV3_4G022030 vs. NCBI nr
Match: NP_001267508.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus] >XP_008449215.1 PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15 [Cucumis melo] >AAQ18142.1 poly(A)-binding protein C-terminal interacting protein 243 [Cucumis sativus] >KGN53972.1 hypothetical protein Csa_4G214830 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 2.0e-56
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60
           MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID
Sbjct: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60

Query: 61  GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK 111
           GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK
Sbjct: 61  GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK 110

[Close]

BLAST of CsaV3_4G022030 vs. NCBI nr
Match: XP_023517029.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.1 bits (518), Expect = 2.4e-49
Identity = 100/110 (90.91%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60
           MALASV+G SKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQE+SDFY+D
Sbjct: 1   MALASVDGRSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEDSDFYMD 60

Query: 61  GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK 111
             GEDDFSNDIA+FLPEAFDLDANEELRTMEAEFEEFIQASL EGYH E+
Sbjct: 61  --GEDDFSNDIADFLPEAFDLDANEELRTMEAEFEEFIQASLTEGYHLEE 108

[Close]

BLAST of CsaV3_4G022030 vs. NCBI nr
Match: XP_022978619.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima] >XP_022978620.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima])

HSP 1 Score: 202.6 bits (514), Expect = 7.0e-49
Identity = 100/110 (90.91%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60
           MALASV+G SKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFY+D
Sbjct: 1   MALASVDGRSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYMD 60

Query: 61  GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK 111
             GEDDFS DIA+FLPEAFDLDA+EELRTMEAEFEEFIQASL EGYH EK
Sbjct: 61  --GEDDFSTDIADFLPEAFDLDASEELRTMEAEFEEFIQASLTEGYHLEK 108

[Close]

BLAST of CsaV3_4G022030 vs. NCBI nr
Match: XP_022932995.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata] >XP_022932996.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata])

HSP 1 Score: 199.9 bits (507), Expect = 4.5e-48
Identity = 98/110 (89.09%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60
           MALASV+G SKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYR+YWLSQHQE+ DFY+D
Sbjct: 1   MALASVDGRSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRNYWLSQHQEDGDFYMD 60

Query: 61  GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK 111
             GEDD SNDIA+FLPEAFDLDANEELRTMEAEFEEFIQASL EGYH EK
Sbjct: 61  --GEDDLSNDIADFLPEAFDLDANEELRTMEAEFEEFIQASLTEGYHLEK 108

[Close]

BLAST of CsaV3_4G022030 vs. NCBI nr
Match: XP_022153878.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15 [Momordica charantia])

HSP 1 Score: 192.6 bits (488), Expect = 7.2e-46
Identity = 98/110 (89.09%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60
           MALASVEG S LNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYI 
Sbjct: 1   MALASVEGRSTLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYI- 60

Query: 61  GEGEDDF-SNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPE 110
              EDDF SNDIA+ LPEAFDLDANEELRTMEAEFEEFIQASL E +HPE
Sbjct: 61  ---EDDFNSNDIADLLPEAFDLDANEELRTMEAEFEEFIQASLTEAHHPE 106

[Close]

BLAST of CsaV3_4G022030 vs. TAIR10
Match: AT2G41430.1 (dehydration-induced protein (ERD15))

HSP 1 Score: 100.9 bits (250), Expect = 5.2e-22
Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 3  LASVEG-SSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYRDYWLSQHQEESD-FYI 62
          +A V G  S LNP+APLFIPAA  QVEDFSP+WWQLVTTSTWY DYW+SQ Q+ +D FY 
Sbjct: 1  MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60

Query: 63 DGEGEDDFSN-DIAEFLPEAFDLDANEE-LRTMEAEFEE 97
          +GE E+   + D+A+ LPE+FD D  E+   T  AEF++
Sbjct: 61 NGENENGGGHIDVADLLPESFDFDDMEDFFDTDAAEFDQ 99

[Close]

BLAST of CsaV3_4G022030 vs. TAIR10
Match: AT4G14270.1 (Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.)

HSP 1 Score: 71.2 bits (173), Expect = 4.4e-13
Identity = 43/93 (46.24%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 10  SKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYIDGEGEDDFS 69
           S LNPNAP+F P  + +VEDFSP+WW LVTTS W+RD+WLS +  E++F     G DDFS
Sbjct: 10  STLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSAN-SENEFL----GGDDFS 69

Query: 70  NDIAEFLPEAFDLDANEELRTMEAEFEEFIQAS 102
                                ME EFEE I +S
Sbjct: 70  --------------------VMEEEFEEMIASS 77

[Close]

BLAST of CsaV3_4G022030 vs. Swiss-Prot
Match: sp|Q39096|ERD15_ARATH (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 9.3e-21
Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 3  LASVEG-SSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYRDYWLSQHQEESD-FYI 62
          +A V G  S LNP+APLFIPAA  QVEDFSP+WWQLVTTSTWY DYW+SQ Q+ +D FY 
Sbjct: 1  MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60

Query: 63 DGEGEDDFSN-DIAEFLPEAFDLDANEE-LRTMEAEFEE 97
          +GE E+   + D+A+ LPE+FD D  E+   T  AEF++
Sbjct: 61 NGENENGGGHIDVADLLPESFDFDDMEDFFDTDAAEFDQ 99

[Close]

BLAST of CsaV3_4G022030 vs. Swiss-Prot
Match: sp|Q94AR4|CID2_ARATH (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 7.9e-12
Identity = 43/93 (46.24%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 10  SKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYIDGEGEDDFS 69
           S LNPNAP+F P  + +VEDFSP+WW LVTTS W+RD+WLS +  E++F     G DDFS
Sbjct: 10  STLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSAN-SENEFL----GGDDFS 69

Query: 70  NDIAEFLPEAFDLDANEELRTMEAEFEEFIQAS 102
                                ME EFEE I +S
Sbjct: 70  --------------------VMEEEFEEMIASS 77

[Close]

BLAST of CsaV3_4G022030 vs. TrEMBL
Match: tr|Q6ELF8|Q6ELF8_CUCSA (Poly(A)-binding protein C-terminal interacting protein 243 OS=Cucumis sativus OX=3659 GN=Csa_4G214830 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60
           MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID
Sbjct: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60

Query: 61  GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK 111
           GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK
Sbjct: 61  GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK 110

[Close]

BLAST of CsaV3_4G022030 vs. TrEMBL
Match: tr|A0A1S3BLI8|A0A1S3BLI8_CUCME (protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Cucumis melo OX=3656 GN=LOC103491162 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60
           MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID
Sbjct: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60

Query: 61  GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK 111
           GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK
Sbjct: 61  GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEGYHPEK 110

[Close]

BLAST of CsaV3_4G022030 vs. TrEMBL
Match: tr|A0A061EXG3|A0A061EXG3_THECC (Dehydration-induced protein, putative OS=Theobroma cacao OX=3641 GN=TCM_024484 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-28
Identity = 66/98 (67.35%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 8   GSSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYIDGEGEDD 67
           G S LNPNAPLFIPA Y QVEDFSP+WWQLVTTSTWYRDYWLSQHQ+E  FY + E +  
Sbjct: 7   GRSTLNPNAPLFIPAVYRQVEDFSPEWWQLVTTSTWYRDYWLSQHQDEDGFYDNAEDDGF 66

Query: 68  FSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNE 105
             NDIA+ LP+ FDL A+E+L  M+ +FEEFIQ+  NE
Sbjct: 67  DGNDIADLLPDTFDLVADEDLSGMDLQFEEFIQSYENE 104

[Close]

BLAST of CsaV3_4G022030 vs. TrEMBL
Match: tr|A0A067K1V9|A0A067K1V9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22456 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27
Identity = 64/101 (63.37%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   MALASVEGSSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYI 60
           MAL S  G S LNP+APLFIPAAY QVEDFSP+WWQLVTTSTWYRDYWLSQHQ+E  FY 
Sbjct: 1   MALVS-GGRSTLNPDAPLFIPAAYQQVEDFSPEWWQLVTTSTWYRDYWLSQHQDEEGFYD 60

Query: 61  DGEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQA 101
           + E +   + D+A+ LP+ FDLDA E+  T+E +F+EF+++
Sbjct: 61  NAEDDSYDACDVADLLPDTFDLDAGEDFSTLEVQFQEFVES 100

[Close]

BLAST of CsaV3_4G022030 vs. TrEMBL
Match: tr|W9S851|W9S851_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015513 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-27
Identity = 68/106 (64.15%), Postives = 79/106 (74.53%), Query Frame = 0


Query: 1   MALASVEGSSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYI 60
           MAL S  G S LNPNAPLFIPAA+ QVEDFSP+WWQL+TTS WY DYWLSQHQ+E  FY 
Sbjct: 1   MALVS-GGRSTLNPNAPLFIPAAFRQVEDFSPEWWQLITTSPWYHDYWLSQHQDEDAFY- 60

Query: 61  DGEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEG 106
               +DD  N +A+ LPE FDLDA +E   +EA+FEEFI+ S  EG
Sbjct: 61  -SNADDDIDN-VADLLPETFDLDAGDEFSNIEAQFEEFIEFSETEG 102

The following BLAST results are available for this feature:

BLAST of CsaV3_4G022030 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267508.1	2.0e-56	100.00	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus] >XP_008449215....	[more]
XP_023517029.1	2.4e-49	90.91	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo]	[more]
XP_022978619.1	7.0e-49	90.91	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima] >XP_022978620...	[more]
XP_022932995.1	4.5e-48	89.09	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata] >XP_0229329...	[more]
XP_022153878.1	7.2e-46	89.09	protein EARLY RESPONSIVE TO DEHYDRATION 15 [Momordica charantia]	[more]

BLAST of CsaV3_4G022030 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41430.1	5.2e-22	58.59	dehydration-induced protein (ERD15)	[more]
AT4G14270.1	4.4e-13	46.24	Protein containing PAM2 motif which mediates interaction with the PABC domain of...	[more]

BLAST of CsaV3_4G022030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39096\|ERD15_ARATH	9.3e-21	58.59	Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
sp\|Q94AR4\|CID2_ARATH	7.9e-12	46.24	Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of CsaV3_4G022030 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|Q6ELF8\|Q6ELF8_CUCSA	1.3e-56	100.00	Poly(A)-binding protein C-terminal interacting protein 243 OS=Cucumis sativus OX...	[more]
tr\|A0A1S3BLI8\|A0A1S3BLI8_CUCME	1.3e-56	100.00	protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Cucumis melo OX=3656 GN=LOC1034911...	[more]
tr\|A0A061EXG3\|A0A061EXG3_THECC	1.5e-28	67.35	Dehydration-induced protein, putative OS=Theobroma cacao OX=3641 GN=TCM_024484 P...	[more]
tr\|A0A067K1V9\|A0A067K1V9_JATCU	1.3e-27	63.37	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22456 PE=4 SV=1	[more]
tr\|W9S851\|W9S851_9ROSA	2.2e-27	64.15	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015513 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009818	Ataxin-2_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G022030.1	CsaV3_4G022030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009818	Ataxin-2, C-terminal	PFAM	PF07145	PAM2	coord: 8..21 e-value: 4.1E-5 score: 22.9
None	No IPR available	PANTHER	PTHR33790	FAMILY NOT NAMED	coord: 1..104
None	No IPR available	PANTHER	PTHR33790:SF1	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2-RELATED	coord: 1..104

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G022030	CSPI04G11910	Wild cucumber (PI 183967)	cpicucB215
CsaV3_4G022030	CmoCh07G013890	Cucurbita moschata (Rifu)	cmocucB1003
CsaV3_4G022030	Cp4.1LG19g00310	Cucurbita pepo (Zucchini)	cpecucB0614
CsaV3_4G022030	Carg21113	Silver-seed gourd	carcucB0513
CsaV3_4G022030	Lsi01G018060	Bottle gourd (USVL1VR-Ls)	cuclsiB284

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G022030	Silver-seed gourd	carcucB0559
CsaV3_4G022030	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G022030	Cucumber (Gy14) v1	cgycucB231
CsaV3_4G022030	Cucurbita maxima (Rimu)	cmacucB0660
CsaV3_4G022030	Cucurbita maxima (Rimu)	cmacucB0726
CsaV3_4G022030	Cucurbita moschata (Rifu)	cmocucB0645
CsaV3_4G022030	Cucurbita moschata (Rifu)	cmocucB0713
CsaV3_4G022030	Cucurbita pepo (Zucchini)	cpecucB0346
CsaV3_4G022030	Cucurbita pepo (Zucchini)	cpecucB0908
CsaV3_4G022030	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G022030	Melon (DHL92) v3.5.1	cucmeB294
CsaV3_4G022030	Watermelon (Charleston Gray)	cucwcgB305
CsaV3_4G022030	Watermelon (97103) v1	cucwmB364
CsaV3_4G022030	Wax gourd	cucwgoB405