CsaV3_4G016050 (gene) Cucumber (Chinese Long) v3

NameCsaV3_4G016050
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 10664236 .. 10664611 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAACCGGGTGAGCAAGCATGTGAAGTCGTTCCGATAGTTGTATCTGATCTACCTCTCTCCACCAGAACGCCAATGTCTCAAAATATAGTGCCAGATGACAATAGAAGCACAAACCCTACAATAGAGGAAGGTGGTAGAAACACAACAGTATCGGGAGAAGAAAGACATTGTGAACCCGCCAAGACTGATGAGGAGATTAGCGCGACAGAAATTCTGCGAATGAGAGACATGCTTCATGAAATATCGAAAGAAAATGAGAAAATAAAAAGAGCAAATGACCAACCTAAACAATCAGCTAGGAGAAATGGTCACAAAGGTAAATCAGTTATCATATGTAATGTCACATATTCACCACTTACTGGTAGCACATTCTAA

mRNA sequence

GAGCAAGCATGTGAAGTCGTTCCGATAGTTGTATCTGATCTACCTCTCTCCACCAGAACGCCAATGTCTCAAAATATAGTGCCAGATGACAATAGAAGCACAAACCCTACAATAGAGGAAGGTGGTAGAAACACAACAGTATCGGGAGAAGAAAGACATTGTGAACCCGCCAAGACTGATGAGGAGATTAGCGCGACAGAAATTCTGCGAATGAGAGACATGCTTCATGAAATATCGAAAGAAAATGAGAAAATAAAAAGAGCAAATGACCAACCTAAACAATCAGCTAGGAGAAATGGTCACAAAGGTAAATCAGTTATCATATGTAATGTCACATATTCACCACTTACTGGTAGCACATTCTA

Coding sequence (CDS)

GAGCAAGCATGTGAAGTCGTTCCGATAGTTGTATCTGATCTACCTCTCTCCACCAGAACGCCAATGTCTCAAAATATAGTGCCAGATGACAATAGAAGCACAAACCCTACAATAGAGGAAGGTGGTAGAAACACAACAGTATCGGGAGAAGAAAGACATTGTGAACCCGCCAAGACTGATGAGGAGATTAGCGCGACAGAAATTCTGCGAATGAGAGACATGCTTCATGAAATATCGAAAGAAAATGAGAAAATAAAAAGAGCAAATGACCAACCTAAACAATCAGCTAGGAGAAATGGTCACAAAGGTAAATCAGTTATCATATGTAATGTCACATATTCACCACTTACTGGTAGCACATTCTA

Protein sequence

EQACEVVPIVVSDLPLSTRTPMSQNIVPDDNRSTNPTIEEGGRNTTVSGEERHCEPAKTDEEISATEILRMRDMLHEISKENEKIKRANDQPKQSARRNGHKGKSVIICNVTYSPLTGSTFX
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G016050.1CsaV3_4G016050.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..104

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G016050Cucumber (Gy14) v2cgybcucB171
CsaV3_4G016050Wild cucumber (PI 183967)cpicucB216