CsaV3_4G014990 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G014990
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionprotein ENHANCED DISEASE RESISTANCE 2-like
Locationchr4 : 10531104 .. 10531338 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATGGGATATTTTGTGGAGGGATAGGCAGAAGAGGAGTTGCCAGAAAGACTGTTCAACGCTGTCTGGAGTTACCAATTGGAGATGTTTTGGCGATTGCCGTAGAGGCACCGACATTGGCACGTGGAGTATCATGTACAAAGGTGAATCACCACAAACTTGGCAATGAAGACGATAACTGGTATTTTGAGATTTGGACTTACTCTTTTGAAATATGGCGATCTAAGTTCATTTAG

mRNA sequence

TATGGGATATTTTGTGGAGGGATAGGCAGAAGAGGAGTTGCCAGAAAGACTGTTCAACGCTGTCTGGAGTTACCAATTGGAGATGTTTTGGCGATTGCCGTAGAGGCACCGACATTGGCACGTGGAGTATCATGTACAAAGGTGAATCACCACAAACTTGGCAATGAAGACGATAACTGGTATTTTGAGATTTGGACTTACTCTTTTGAAATATGGCGATCTAAGTTCATTTA

Coding sequence (CDS)

TATGGGATATTTTGTGGAGGGATAGGCAGAAGAGGAGTTGCCAGAAAGACTGTTCAACGCTGTCTGGAGTTACCAATTGGAGATGTTTTGGCGATTGCCGTAGAGGCACCGACATTGGCACGTGGAGTATCATGTACAAAGGTGAATCACCACAAACTTGGCAATGAAGACGATAACTGGTATTTTGAGATTTGGACTTACTCTTTTGAAATATGGCGATCTAAGTTCATTTA

Protein sequence

YGIFCGGIGRRGVARKTVQRCLELPIGDVLAIAVEAPTLARGVSCTKVNHHKLGNEDDNWYFEIWTYSFEIWRSKFIX
Homology
[Close]
BLAST of CsaV3_4G014990 vs. NCBI nr
Match: XP_004138692.1 (PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Cucumis sativus] >KGN63009.1 hypothetical protein Csa_2G382820 [Cucumis sativus])

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-04
Identity = 24/29 (82.76%), Postives = 25/29 (86.21%), Query Frame = 0 

Query: 31  AIAVEAPTLARGVSCTKVNHHKLGNEDDN 60
           A  VEAPTLARGVSC KVNHHK G+EDDN
Sbjct: 273 ATVVEAPTLARGVSCAKVNHHKPGDEDDN 301

[Close]
BLAST of CsaV3_4G014990 vs. NCBI nr
Match: XP_008445284.1 (PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Cucumis melo])

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-04
Identity = 24/29 (82.76%), Postives = 25/29 (86.21%), Query Frame = 0 

Query: 31  AIAVEAPTLARGVSCTKVNHHKLGNEDDN 60
           A  VEAPTLARGVSC KVNHHK G+EDDN
Sbjct: 274 ATVVEAPTLARGVSCAKVNHHKPGDEDDN 302

[Close]
BLAST of CsaV3_4G014990 vs. TrEMBL
Match: tr|A0A1S3BCA6|A0A1S3BCA6_CUCME (protein ENHANCED DISEASE RESISTANCE 2-like OS=Cucumis melo OX=3656 GN=LOC103488362 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-04
Identity = 24/29 (82.76%), Postives = 25/29 (86.21%), Query Frame = 0 

Query: 31  AIAVEAPTLARGVSCTKVNHHKLGNEDDN 60
           A  VEAPTLARGVSC KVNHHK G+EDDN
Sbjct: 274 ATVVEAPTLARGVSCAKVNHHKPGDEDDN 302

[Close]
BLAST of CsaV3_4G014990 vs. TrEMBL
Match: tr|A0A0A0LPV3|A0A0A0LPV3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382820 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-04
Identity = 24/29 (82.76%), Postives = 25/29 (86.21%), Query Frame = 0 

Query: 31  AIAVEAPTLARGVSCTKVNHHKLGNEDDN 60
           A  VEAPTLARGVSC KVNHHK G+EDDN
Sbjct: 273 ATVVEAPTLARGVSCAKVNHHKPGDEDDN 301

The following BLAST results are available for this feature:
BLAST of CsaV3_4G014990 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138692.11.6e-0482.76PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Cucumis sativus] >KGN6300... [more]
XP_008445284.11.6e-0482.76PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Cucumis melo][more]
BLAST of CsaV3_4G014990 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G014990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G014990 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BCA6|A0A1S3BCA6_CUCME1.1e-0482.76protein ENHANCED DISEASE RESISTANCE 2-like OS=Cucumis melo OX=3656 GN=LOC1034883... [more]
tr|A0A0A0LPV3|A0A0A0LPV3_CUCSA1.1e-0482.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382820 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G014990.1CsaV3_4G014990.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G014990Cucumber (Gy14) v2cgybcucB171
CsaV3_4G014990Wild cucumber (PI 183967)cpicucB216