CsaV3_4G014880 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAACATAAAATAATATTTTTTATTAAAAAAATAATAAATAAAGATTAGAAATTTAGAAAATATTTCCCCAAATTATAAACCCTTATTATTTTCTCCAATTCTTCTGCAAAATCTCCATCTCCAATCTGATCGTCTTCCATCTCCAATCCGACCATCTTCCGGCCTCGTCACCATTCGCCTCTACTCCTGGCCGTCTGTTCACTCTGGTGTGGCCATCTATTCGCTCCGATGTGTCCATCGTTTTCATCTTCTCCAGTGCTGCCATTCGTGCCCGCCATCACCTCCTCTGCCGGTAAGCTTCTATTCCTTCTCTCTTTGTCTTTCTCTCTTTGTGAATATTGTGTATTTCCCTTTCATAAACATTCCAACAATCCAATGTCTTTATACATGAGTTTCAACTACCCCTCTTCTTCTTACCCAAGTCAGAAGAAGAAAAGTGAAGGAGGGGCGAGTTTTTTTTTTTGTTTTTTTTCATGGTGGAAGTTTGAATTTTGAAAGTGGGTGTTCAAATGTCGCTTCATTATCCTAAGTACACGAAGAGGGATTATGAGAAAATGGAGGAAGGTAAGTTGAATTTGCTTCTAAAACAATATGGACTCTGTTTTGATGGTACCCTTAAGGGAAACGAGCATTTGCTATTGGGATGTTCTTATGGCCTTAACAACTTTGAATTTACCCACCATGTGTTTGATGAAATTCCTAAAAAAAAAAACTATTAAATTTTTATGAACTCCAACTCTGCCCTTGGTCTTGATTGTCACATCTTATGTTTCTATGGATGTTTCTTAGTGTGCTGAGAATGGTTTTTCAGGATTCAATATTTAACAAAAACGTCTACATGCTTGCAAGGTTTGATTTTCTCTATTTTTCTTTGAATTGGTGCTTACCTAGTGATTTTAAGATATGATTTGGAGTAGTGTAAATGACTGATAATTTGTGGGGATTTTCACTTAATACATTTAGGAATTTCGTTAGGTTTTATCTTGTTGTACTGTAGACAGAGGAAGAACATAAGTTTTCCTTGTTGGGATTACAACAAGATTTCTTGATTGATAGGATTTTGGAATCATGCAGAAAAGTTGAAGTATTCTCTTATTTATTTCTTGAAATCTTCTAAAAAAGAACATCATCAATCAATTCTATCTTGAAACTTAAACAAGATTTTTTTTTTGGTGAGATTATGAGAAAATATGATAGTAGTTTGTGCTTGTAAGGTGTTTGATGATATGTGTCTGAAGCTTTAAAAGTTTTTTTCTTTTTCTTTTGCATTGTGCGAGTGTGTTCTATGATTTGATTGTTACACACACTGAAGCCTATTTTTAACTTAGTATATTAGACTTGTTGTAATGAAGTTTAGTTTGGCAATTGGCAATTCACCATTAGAAAATTGTTTAATTTGTTTTTATTGTGCTAGTTGCTGTCATTTTGCAGTTTGTACAAGTATTTGTAGCTAAGTCATGTCAATTCATCTATATGGTGCATAATGGTTTTTTAGTGTACACTTTCCACCCCTCTTTCCTCCTTTTGGATAGAAGTTGCTCAAAATGTTCAATCTCGTGAATTAATTGTTTCCCTGTTTTCATAGGCAGGAAGCGTGGATGTTCAATTATATATACGTTTGTTTAGGAGCTATTTTTGATACCCTGAAATCATTTGATTCATAGACCTATTATCTTTTATGTTATGAGTTGGTCTAAATGTATATTTTGTTGTCTCCATTAGACTGAGGATCCACTATCTTTTCATTGTAGATAATATATGGGTCCTCGAAAATGTTCTGCTCAGTTTTCGTGATAATTTATGTTCCAGACTTATGATGGAATGATTATTGGAGAACATTCTAGGGAATCAGATCTAGATGTAAGTTGAGAACTTTATGTTTAGACTTTGGATCGAAGTTGTAATTTCTACTTGATTTACATGGTAAGCAATTTTCTTTTTTCTAGGTTAATCTTGTAAGAACTAAAGAAAACTTACCAATATCCGTTCTGCTTGCAAAGATGAAAACATGAAGCTATCTCCACCTCGACTTGTATGTTATTTCTACATTGAGTTCCAATTGTATATATTTTAGTGTTATTGTGAATCCATTATCCAAGATGTAGAATTCAGTTCTAGAACGTCAGGACACGAGTATGCTGAAAAGCTTTATTATCTTTTCCTAAGTATGATTACTCACACTAACATCTAATTCTAAACTTAAATGCAGAGATGAGTCTTGAAGAAGCGATATGATACGTTGCATCTGATGAACTTATTAAGGTAGTTTATGATTTATTCATTCAAATTGTCTTTCCCAAGGTCAATATAGCCCCTTTATGTTCACTAAAGATGTTGCAATTAATTCACGATATTGCATTTGGGTAAATTTATGCTTTATTAAGGTAGTTTATGCTTTATTCATTCAGCAATGGAGTTGGTGCCATGTTTATGCAATCCAAAGGGACTTGATTTACATGATGTCTAAGGAATTAGCCTTTTAGTTGAAAAATGTAGTCTCATATTTCCGGACAGTTATTGTCTGCTTTGTCAGACATCTTTCTAAAGTCTACAAAAGATGATGGTTATTTGCAGGCATGCCTCTATTGGTTGAAAAATGAAAACTTGTGCTTTTGTGATAGGTTGACTTTGTTATTAGTTAGGTTACTTCAGTTGTTGGTTCATAAGCATATTGTGGTAGTTACTGCTAGTTGTCTTGTGTATGTTTGCACTTCATCCATTTCTTTTAATGACTTTTGCTTCTTCTATGTCTTGGAGTTCTTTTGTTTCATATGGGCTAGGGTATTTTGTATATTCTATATATTCCAATACTAGTTCTATTTGAACTATTTGCAGCCCCAATTGGTGAAATTTCTTCAATATCAGATAAAAGTATCTTGTCAAATCTCTTGGGGAAGACAATAAAGTTAGAAACAGAGGATTAGGAGACACACCCATAGAGTTTATTAGAACTCTTGCCTAAAAATTAGAATTCTTCATTCCAAGCATCCTTCCAATTATAATTTTAAAACTAAACTAAATTTTCAAATGAAACAGGAAGATGGATCTCTTGCTAGTTTCTTATTCCTCAGATCCCAACCTAAAAATAATCCAAAGGCCTCCCTTTTTACTAGCCAGCAAGGTCAATATAGCCTCTTTATGTTTTCTTTTAATTTTTAGGCATACTTATAGCAACTGTTAACAATTTTTCTACTGCTACAGATTCCAATAGCATTGGATATGGCTGTTGAATTTCGATCCAAAGATTCTGACCTATGGAAGCACATTTATGCAGATGAGTACATGAAATGTGAAGTGATAGAGTGTTGTGAATCTTTAAAAAATGTCCTGAATGTTCTGTTTGTTGGAGAAAATGAGAAAATGTTCCAAACTACATTCCTACTTATTGAACCAAACATCATCAAATAATAATAGTTCTTTCGTTTTTGTCAGTTGCAGTTTTTTTTTTTTTTGTCGACTTTGACACTTGAACAAGTTTTTTTTT ATGAACTTATTAAGGAAGATGGATCTCTTGCTAGTTTCTTATTCCTCAGATCCCAACCTAAAAATAATCCAAAGGCCTCCCTTTTTACTAGCCAGCAAGATTCCAATAGCATTGGATATGGCTGTTGAATTTCGATCCAAAGATTCTGACCTATGGAAGCACATTTATGCAGATGAGTACATGAAATGTGAAGTGATAGAGTGTTGTGAATCTTTAAAAAATGTCCTGAATGTTCTGTTTGTTGGAGAAAATGAGAAAATGTTCCAAACTACATTCCTACTTATTGAACCAAACATCATCAAATAA ATGAACTTATTAAGGAAGATGGATCTCTTGCTAGTTTCTTATTCCTCAGATCCCAACCTAAAAATAATCCAAAGGCCTCCCTTTTTACTAGCCAGCAAGATTCCAATAGCATTGGATATGGCTGTTGAATTTCGATCCAAAGATTCTGACCTATGGAAGCACATTTATGCAGATGAGTACATGAAATGTGAAGTGATAGAGTGTTGTGAATCTTTAAAAAATGTCCTGAATGTTCTGTTTGTTGGAGAAAATGAGAAAATGTTCCAAACTACATTCCTACTTATTGAACCAAACATCATCAAATAA MNLLRKMDLLLVSYSSDPNLKIIQRPPFLLASKIPIALDMAVEFRSKDSDLWKHIYADEYMKCEVIECCESLKNVLNVLFVGENEKMFQTTFLLIEPNIIK
BLAST of CsaV3_4G014880 vs. NCBI nr
Match: XP_022947858.1 (callose synthase 5 [Cucurbita moschata]) HSP 1 Score: 142.1 bits (357), Expect = 1.0e-30 Identity = 75/98 (76.53%), Postives = 80/98 (81.63%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. NCBI nr
Match: XP_023007270.1 (callose synthase 5 [Cucurbita maxima]) HSP 1 Score: 142.1 bits (357), Expect = 1.0e-30 Identity = 75/98 (76.53%), Postives = 80/98 (81.63%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. NCBI nr
Match: XP_023533725.1 (callose synthase 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 142.1 bits (357), Expect = 1.0e-30 Identity = 75/98 (76.53%), Postives = 80/98 (81.63%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. NCBI nr
Match: XP_022150844.1 (callose synthase 5 [Momordica charantia]) HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30 Identity = 75/98 (76.53%), Postives = 80/98 (81.63%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. NCBI nr
Match: XP_008460894.1 (PREDICTED: callose synthase 5 [Cucumis melo]) HSP 1 Score: 141.4 bits (355), Expect = 1.8e-30 Identity = 74/98 (75.51%), Postives = 79/98 (80.61%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. TAIR10
Match: AT2G13680.1 (callose synthase 5) HSP 1 Score: 130.2 bits (326), Expect = 7.3e-31 Identity = 66/98 (67.35%), Postives = 78/98 (79.59%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. TAIR10
Match: AT1G05570.1 (callose synthase 1) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-20 Identity = 52/98 (53.06%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. TAIR10
Match: AT2G31960.1 (glucan synthase-like 3) HSP 1 Score: 91.7 bits (226), Expect = 2.9e-19 Identity = 50/98 (51.02%), Postives = 65/98 (66.33%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. TAIR10
Match: AT5G13000.1 (glucan synthase-like 12) HSP 1 Score: 91.7 bits (226), Expect = 2.9e-19 Identity = 47/82 (57.32%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. TAIR10
Match: AT1G06490.1 (glucan synthase-like 7) HSP 1 Score: 71.2 bits (173), Expect = 4.0e-13 Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. Swiss-Prot
Match: sp|Q3B724|CALS5_ARATH (Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.3e-29 Identity = 66/98 (67.35%), Postives = 78/98 (79.59%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. Swiss-Prot
Match: sp|Q9AUE0|CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2) HSP 1 Score: 95.9 bits (237), Expect = 2.8e-19 Identity = 52/98 (53.06%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. Swiss-Prot
Match: sp|Q9SL03|CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3) HSP 1 Score: 91.7 bits (226), Expect = 5.2e-18 Identity = 50/98 (51.02%), Postives = 65/98 (66.33%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. Swiss-Prot
Match: sp|Q9LXT9|CALS3_ARATH (Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3) HSP 1 Score: 91.7 bits (226), Expect = 5.2e-18 Identity = 47/82 (57.32%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. Swiss-Prot
Match: sp|Q9LTG5|CALS4_ARATH (Callose synthase 4 OS=Arabidopsis thaliana OX=3702 GN=CALS4 PE=3 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 7.3e-12 Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. TrEMBL
Match: tr|A0A1S3CDY0|A0A1S3CDY0_CUCME (callose synthase 5 OS=Cucumis melo OX=3656 GN=LOC103499636 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30 Identity = 74/98 (75.51%), Postives = 79/98 (80.61%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. TrEMBL
Match: tr|A0A1S4E305|A0A1S4E305_CUCME (callose synthase 5-like OS=Cucumis melo OX=3656 GN=LOC103499639 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30 Identity = 75/98 (76.53%), Postives = 80/98 (81.63%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. TrEMBL
Match: tr|A0A0A0LJS7|A0A0A0LJS7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302170 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.8e-30 Identity = 73/96 (76.04%), Postives = 77/96 (80.21%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. TrEMBL
Match: tr|A0A1R3GGE8|A0A1R3GGE8_COCAP (Glycosyl transferase, family 48 OS=Corchorus capsularis OX=210143 GN=CCACVL1_25939 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.1e-28 Identity = 72/98 (73.47%), Postives = 78/98 (79.59%), Query Frame = 0
BLAST of CsaV3_4G014880 vs. TrEMBL
Match: tr|A0A0K9QQ70|A0A0K9QQ70_SPIOL (Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_153850 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.1e-28 Identity = 70/100 (70.00%), Postives = 79/100 (79.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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