CsaV3_4G014860 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G014860
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionGag-asp_proteas domain-containing protein
Locationchr4 : 10349483 .. 10349973 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCCCGTGGTAAACTTAGACGGTTAAGACAAACCAGAAGTATTCTCGAGTACGTGAAAGAATTCACAACCCTCATGTTGGAAATTGATGACATGTTCGACAAAGACGCACTCTTTCATTTTTGAGATGGTCTCAAAGACTGGGCAAGACAGAACTCGACCGACGGAATGTGCAAAATCTCGATGATGCCATTGTCGCCATAGAGACACTCACGAATTATCGATCCAAGGAGAAGAGAATCAACGAAAATGGAGGAGAAGTGTCAGAGTCAAGAAGGGAACATGTTCACAAGACGAGGAAAAGCCACAAGGTTAGTGGAAGGCACGGGAAAGCCACGGAAGTGAGGAAAGGTACATCTTTCAAAACCCCTAGCACTTGTTTTCTCTGCAATGGTCCACATTGGGCAACTGATTGTCCACAAAAGAAAATGTTGAGTGCATTGGTGGCAAAAATCCACGAGGGAGAGGAGGAAGCACCCGTACCATAG

mRNA sequence

ATGGAGGCCCGTGGTAAACTTAGACGGTTAAGACAAACCAGAAGTATTCTCGAGTACGTGAAAGAATTCACAACCCTCATGTTGGAAATTGATGACATACTGGGCAAGACAGAACTCGACCGACGGAATGTGCAAAATCTCGATGATGCCATTGTCGCCATAGAGACACTCACGAATTATCGATCCAAGGAGAAGAGAATCAACGAAAATGGAGGAGAAGTGTCAGAGTCAAGAAGGGAACATGTTCACAAGACGAGGAAAAGCCACAAGGTTAGTGGAAGGCACGGGAAAGCCACGGAAGTGAGGAAAGGTACATCTTTCAAAACCCCTAGCACTTGTTTTCTCTGCAATGGTCCACATTGGGCAACTGATTGTCCACAAAAGAAAATGTTGAGTGCATTGGTGGCAAAAATCCACGAGGGAGAGGAGGAAGCACCCGTACCATAG

Coding sequence (CDS)

ATGGAGGCCCGTGGTAAACTTAGACGGTTAAGACAAACCAGAAGTATTCTCGAGTACGTGAAAGAATTCACAACCCTCATGTTGGAAATTGATGACATACTGGGCAAGACAGAACTCGACCGACGGAATGTGCAAAATCTCGATGATGCCATTGTCGCCATAGAGACACTCACGAATTATCGATCCAAGGAGAAGAGAATCAACGAAAATGGAGGAGAAGTGTCAGAGTCAAGAAGGGAACATGTTCACAAGACGAGGAAAAGCCACAAGGTTAGTGGAAGGCACGGGAAAGCCACGGAAGTGAGGAAAGGTACATCTTTCAAAACCCCTAGCACTTGTTTTCTCTGCAATGGTCCACATTGGGCAACTGATTGTCCACAAAAGAAAATGTTGAGTGCATTGGTGGCAAAAATCCACGAGGGAGAGGAGGAAGCACCCGTACCATAG

Protein sequence

MEARGKLRRLRQTRSILEYVKEFTTLMLEIDDILGKTELDRRNVQNLDDAIVAIETLTNYRSKEKRINENGGEVSESRREHVHKTRKSHKVSGRHGKATEVRKGTSFKTPSTCFLCNGPHWATDCPQKKMLSALVAKIHEGEEEAPVP
Homology
[Close]
BLAST of CsaV3_4G014860 vs. NCBI nr
Match: XP_008455798.1 (PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo])

HSP 1 Score: 122.9 bits (307), Expect = 9.4e-25
Identity = 75/169 (44.38%), Postives = 97/169 (57.40%), Query Frame = 0 

Query: 1   MEARGKLRRLRQTRSILEYVKEFTTLMLEIDDI---------------LGKTELDRRNVQ 60
           +E+RGKLRRLR T SIL+YVKEFTTLMLEI D+                 K ELDRRNVQ
Sbjct: 160 IESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQ 219

Query: 61  NLDDAIVAIETLTNY----RSKEKRINENGGEVSESRREHVHKTRKSHKVSGRHGKATEV 120
            LDDAI A+ETL +Y    + K+    ++GG+  +++        K      ++GK    
Sbjct: 220 TLDDAIAAVETLVDYSAQSKGKKPGPEKHGGKPDKTKNFGRKDGGKVKTFQWKNGKNDGA 279

Query: 121 RKGTSFKTPSTCFLCNGPHWATDCPQKKMLSALVAKIHEGE--EEAPVP 149
            +G     P  CF+C GPHW  DCP +K L+ALVAK  E +  E+AP P
Sbjct: 280 HRGECSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQEVKQVEDAPGP 328

[Close]
BLAST of CsaV3_4G014860 vs. NCBI nr
Match: XP_008446938.1 (PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo])

HSP 1 Score: 119.8 bits (299), Expect = 8.0e-24
Identity = 75/169 (44.38%), Postives = 96/169 (56.80%), Query Frame = 0 

Query: 1   MEARGKLRRLRQTRSILEYVKEFTTLMLEIDDI---------------LGKTELDRRNVQ 60
           +E+RGKLRRLR TRSIL+YVKEFTTLMLEI D+                 K ELDRRNVQ
Sbjct: 249 IESRGKLRRLRHTRSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQ 308

Query: 61  NLDDAIVAIETLTNY----RSKEKRINENGGEVSESRREHVHKTRKSHKVSGRHGKATEV 120
            LDDAI A ETL +Y    + K+    ++GG+  +++        K      ++GK    
Sbjct: 309 TLDDAIAAAETLVDYSTQLKGKKPGPEKHGGKPDKTKNFGRKDGGKVKTFQWKNGKNDGA 368

Query: 121 RKGTSFKTPSTCFLCNGPHWATDCPQKKMLSALVAKIHEGE--EEAPVP 149
            +G S   P   F+C GPHW  DCP +K L+ALV K  E +  E+AP P
Sbjct: 369 HRGESSNPPKPYFICKGPHWTRDCPNRKALNALVTKFQEIKQVEDAPGP 417

[Close]
BLAST of CsaV3_4G014860 vs. NCBI nr
Match: XP_008442289.1 (PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo])

HSP 1 Score: 114.0 bits (284), Expect = 4.4e-22
Identity = 71/169 (42.01%), Postives = 93/169 (55.03%), Query Frame = 0 

Query: 1   MEARGKLRRLRQTRSILEYVKEFTTLMLEIDDI---------------LGKTELDRRNVQ 60
           +E+RGKL  LR T SIL+YVKEFTTLMLEI D+                 K ELD RNVQ
Sbjct: 211 IESRGKLHPLRHTDSILDYVKEFTTLMLEIGDLPEKEALFQFKYGLKDWAKIELDHRNVQ 270

Query: 61  NLDDAIVAIETLTNY----RSKEKRINENGGEVSESRREHVHKTRKSHKVSGRHGKATEV 120
            LDDAI  +ETL +Y    + K+    ++GG+  +++        K      R+GK    
Sbjct: 271 TLDDAIAVVETLVDYSAQSKGKKPGPEKHGGKPDKTKNFGRKDGGKVKTFQWRNGKNDGT 330

Query: 121 RKGTSFKTPSTCFLCNGPHWATDCPQKKMLSALVAKIHEGE--EEAPVP 149
            +G S      CF+C GPHW  DCP +K L+AL+AK  E +  E+AP P
Sbjct: 331 HRGESSNPSKPCFICKGPHWTRDCPNQKALNALIAKFQEVKQVEDAPGP 379

[Close]
BLAST of CsaV3_4G014860 vs. NCBI nr
Match: XP_012089545.2 (LOW QUALITY PROTEIN: uncharacterized protein LOC105647934, partial [Jatropha curcas])

HSP 1 Score: 111.3 bits (277), Expect = 2.8e-21
Identity = 67/155 (43.23%), Postives = 93/155 (60.00%), Query Frame = 0 

Query: 2   EARGKLRRLRQTRSILEYVKEFTTLMLEIDDILG---------------KTELDRRNVQN 61
           EARGKLRRLRQ+ SI +Y+KEFTTLMLEIDD+                 K EL+RR VQ 
Sbjct: 34  EARGKLRRLRQSGSIPDYIKEFTTLMLEIDDLSDKDALFYFKDGLKDWTKVELERRGVQT 93

Query: 62  LDDAIVAIETLTNY----RSKEKRINENGGEVSESRREHVHKTRKSHKVSGRHGKATEVR 121
           LDDAI  +E+L +Y    ++K+   +++GGE    R++H H+       S R    T  +
Sbjct: 94  LDDAIAVVESLPDYSTQAKNKKPVPSKSGGERQGQRKDH-HRREDGPSKSFRGKHNTPFK 153

Query: 122 KGTSFKTPSTCFLCNGPHWATDCPQKKMLSALVAK 138
           +  S    + CF+C GPHW  DCP++K L+A+VA+
Sbjct: 154 RDYSKPPLTPCFICEGPHWVRDCPKRKALNAMVAE 187

[Close]
BLAST of CsaV3_4G014860 vs. NCBI nr
Match: XP_015389228.1 (uncharacterized protein LOC107178484 [Citrus sinensis])

HSP 1 Score: 108.6 bits (270), Expect = 1.8e-20
Identity = 66/156 (42.31%), Postives = 90/156 (57.69%), Query Frame = 0 

Query: 2   EARGKLRRLRQTRSILEYVKEFTTLMLEIDDI---------------LGKTELDRRNVQN 61
           EAR +LRRL+Q+ SI +Y+ EFTTLMLEI D+                 KTELDRR VQ 
Sbjct: 245 EARARLRRLKQSGSIRDYINEFTTLMLEISDMSDKDSLFYFQDGLKDWAKTELDRRGVQT 304

Query: 62  LDDAIVAIETLTNY--RSKEKRINE--NGGEVSESRREHVHKTRKSHKVSGRHGKATEVR 121
           LDDAI   E+LT Y  +SK+K+ N+   GGE  + +  +     +    S +  +     
Sbjct: 305 LDDAIAVAESLTEYSTQSKDKKANQGKGGGESRKDKGNNRKDWGQKKPPSNKSWQGKSEG 364

Query: 122 KGTSFKTPSTCFLCNGPHWATDCPQKKMLSALVAKI 139
           K  + K  S CF+CNGPHW  DCP+K+ L+AL A++
Sbjct: 365 KKEAPKPRSPCFICNGPHWVRDCPEKRSLNALAAQL 400

[Close]
BLAST of CsaV3_4G014860 vs. TrEMBL
Match: tr|A0A1S3C1B3|A0A1S3C1B3_CUCME (uncharacterized protein LOC103495894 OS=Cucumis melo OX=3656 GN=LOC103495894 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.2e-25
Identity = 75/169 (44.38%), Postives = 97/169 (57.40%), Query Frame = 0 

Query: 1   MEARGKLRRLRQTRSILEYVKEFTTLMLEIDDI---------------LGKTELDRRNVQ 60
           +E+RGKLRRLR T SIL+YVKEFTTLMLEI D+                 K ELDRRNVQ
Sbjct: 160 IESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQ 219

Query: 61  NLDDAIVAIETLTNY----RSKEKRINENGGEVSESRREHVHKTRKSHKVSGRHGKATEV 120
            LDDAI A+ETL +Y    + K+    ++GG+  +++        K      ++GK    
Sbjct: 220 TLDDAIAAVETLVDYSAQSKGKKPGPEKHGGKPDKTKNFGRKDGGKVKTFQWKNGKNDGA 279

Query: 121 RKGTSFKTPSTCFLCNGPHWATDCPQKKMLSALVAKIHEGE--EEAPVP 149
            +G     P  CF+C GPHW  DCP +K L+ALVAK  E +  E+AP P
Sbjct: 280 HRGECSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQEVKQVEDAPGP 328

[Close]
BLAST of CsaV3_4G014860 vs. TrEMBL
Match: tr|A0A1S3BG92|A0A1S3BG92_CUCME (uncharacterized protein LOC103489499 OS=Cucumis melo OX=3656 GN=LOC103489499 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.3e-24
Identity = 75/169 (44.38%), Postives = 96/169 (56.80%), Query Frame = 0 

Query: 1   MEARGKLRRLRQTRSILEYVKEFTTLMLEIDDI---------------LGKTELDRRNVQ 60
           +E+RGKLRRLR TRSIL+YVKEFTTLMLEI D+                 K ELDRRNVQ
Sbjct: 249 IESRGKLRRLRHTRSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQ 308

Query: 61  NLDDAIVAIETLTNY----RSKEKRINENGGEVSESRREHVHKTRKSHKVSGRHGKATEV 120
            LDDAI A ETL +Y    + K+    ++GG+  +++        K      ++GK    
Sbjct: 309 TLDDAIAAAETLVDYSTQLKGKKPGPEKHGGKPDKTKNFGRKDGGKVKTFQWKNGKNDGA 368

Query: 121 RKGTSFKTPSTCFLCNGPHWATDCPQKKMLSALVAKIHEGE--EEAPVP 149
            +G S   P   F+C GPHW  DCP +K L+ALV K  E +  E+AP P
Sbjct: 369 HRGESSNPPKPYFICKGPHWTRDCPNRKALNALVTKFQEIKQVEDAPGP 417

[Close]
BLAST of CsaV3_4G014860 vs. TrEMBL
Match: tr|A0A1S3B5C5|A0A1S3B5C5_CUCME (uncharacterized protein LOC103486198 OS=Cucumis melo OX=3656 GN=LOC103486198 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.9e-22
Identity = 71/169 (42.01%), Postives = 93/169 (55.03%), Query Frame = 0 

Query: 1   MEARGKLRRLRQTRSILEYVKEFTTLMLEIDDI---------------LGKTELDRRNVQ 60
           +E+RGKL  LR T SIL+YVKEFTTLMLEI D+                 K ELD RNVQ
Sbjct: 211 IESRGKLHPLRHTDSILDYVKEFTTLMLEIGDLPEKEALFQFKYGLKDWAKIELDHRNVQ 270

Query: 61  NLDDAIVAIETLTNY----RSKEKRINENGGEVSESRREHVHKTRKSHKVSGRHGKATEV 120
            LDDAI  +ETL +Y    + K+    ++GG+  +++        K      R+GK    
Sbjct: 271 TLDDAIAVVETLVDYSAQSKGKKPGPEKHGGKPDKTKNFGRKDGGKVKTFQWRNGKNDGT 330

Query: 121 RKGTSFKTPSTCFLCNGPHWATDCPQKKMLSALVAKIHEGE--EEAPVP 149
            +G S      CF+C GPHW  DCP +K L+AL+AK  E +  E+AP P
Sbjct: 331 HRGESSNPSKPCFICKGPHWTRDCPNQKALNALIAKFQEVKQVEDAPGP 379

[Close]
BLAST of CsaV3_4G014860 vs. TrEMBL
Match: tr|A0A2U1NEZ9|A0A2U1NEZ9_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA274570 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.4e-18
Identity = 58/154 (37.66%), Postives = 88/154 (57.14%), Query Frame = 0 

Query: 2   EARGKLRRLRQTRSILEYVKEFTTLMLEIDDIL---------------GKTELDRRNVQN 61
           EA+ KLRRLR T +I +Y+KEFTT +LEIDD+                 + E+DRRNV+ 
Sbjct: 173 EAKAKLRRLRHTGTISDYIKEFTTTLLEIDDVADQDALFYFKDGLKEWARVEIDRRNVKT 232

Query: 62  LDDAIVAIETLTNYRSKEKR--INENGGEVSESRREHVHKTRKSHKVSGRHGKATEVRKG 121
           LD+AI A E++ +Y ++ +R   N+ G E +  +R             G   + +  +K 
Sbjct: 233 LDEAIAAAESIVDYSNRPRRPLTNKTGVERAPVKRLD----------GGPKFERSFQKKD 292

Query: 122 TSFKTPSTCFLCNGPHWATDCPQKKMLSALVAKI 139
           TS   P  CF+C+GPHW  +CP +K ++ALVA++
Sbjct: 293 TSKPPPKPCFICDGPHWTRECPSRKAINALVAEM 316

[Close]
BLAST of CsaV3_4G014860 vs. TrEMBL
Match: tr|A0A2U1PL38|A0A2U1PL38_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA095360 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.4e-18
Identity = 58/154 (37.66%), Postives = 88/154 (57.14%), Query Frame = 0 

Query: 2   EARGKLRRLRQTRSILEYVKEFTTLMLEIDDIL---------------GKTELDRRNVQN 61
           EA+ KLRRLR T +I +Y+KEFTT +LEIDD+                 + E+DRRNV+ 
Sbjct: 259 EAKAKLRRLRHTGTISDYIKEFTTTLLEIDDVADQDALFYFKDGLKEWARVEIDRRNVKT 318

Query: 62  LDDAIVAIETLTNYRSKEKR--INENGGEVSESRREHVHKTRKSHKVSGRHGKATEVRKG 121
           LD+AI A E++ +Y ++ +R   N+ G E +  +R             G   + +  +K 
Sbjct: 319 LDEAIAAAESIVDYSNRPRRPLTNKTGVERAPVKRLD----------GGPKFERSFQKKD 378

Query: 122 TSFKTPSTCFLCNGPHWATDCPQKKMLSALVAKI 139
           TS   P  CF+C+GPHW  +CP +K ++ALVA++
Sbjct: 379 TSKPPPKPCFICDGPHWTRECPSRKAINALVAEM 402

The following BLAST results are available for this feature:
BLAST of CsaV3_4G014860 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455798.19.4e-2544.38PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo][more]
XP_008446938.18.0e-2444.38PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo][more]
XP_008442289.14.4e-2242.01PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo][more]
XP_012089545.22.8e-2143.23LOW QUALITY PROTEIN: uncharacterized protein LOC105647934, partial [Jatropha cur... [more]
XP_015389228.11.8e-2042.31uncharacterized protein LOC107178484 [Citrus sinensis][more]
BLAST of CsaV3_4G014860 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G014860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G014860 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C1B3|A0A1S3C1B3_CUCME6.2e-2544.38uncharacterized protein LOC103495894 OS=Cucumis melo OX=3656 GN=LOC103495894 PE=... [more]
tr|A0A1S3BG92|A0A1S3BG92_CUCME5.3e-2444.38uncharacterized protein LOC103489499 OS=Cucumis melo OX=3656 GN=LOC103489499 PE=... [more]
tr|A0A1S3B5C5|A0A1S3B5C5_CUCME2.9e-2242.01uncharacterized protein LOC103486198 OS=Cucumis melo OX=3656 GN=LOC103486198 PE=... [more]
tr|A0A2U1NEZ9|A0A2U1NEZ9_ARTAN7.4e-1837.66Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA274570 PE=4 SV=1[more]
tr|A0A2U1PL38|A0A2U1PL38_ARTAN7.4e-1837.66Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA095360 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G014860.1CsaV3_4G014860.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..98

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G014860Silver-seed gourdcarcucB0703
CsaV3_4G014860Silver-seed gourdcarcucB1092
CsaV3_4G014860Cucurbita pepo (Zucchini)cpecucB0972
CsaV3_4G014860Cucumber (Gy14) v2cgybcucB171
CsaV3_4G014860Cucurbita maxima (Rimu)cmacucB0030
CsaV3_4G014860Cucurbita maxima (Rimu)cmacucB0563
CsaV3_4G014860Cucurbita moschata (Rifu)cmocucB0018
CsaV3_4G014860Cucurbita moschata (Rifu)cmocucB0549
CsaV3_4G014860Cucurbita pepo (Zucchini)cpecucB0716
CsaV3_4G014860Wild cucumber (PI 183967)cpicucB216
CsaV3_4G014860Bottle gourd (USVL1VR-Ls)cuclsiB316
CsaV3_4G014860Melon (DHL92) v3.5.1cucmeB312
CsaV3_4G014860Melon (DHL92) v3.6.1cucmedB302
CsaV3_4G014860Watermelon (Charleston Gray)cucwcgB294
CsaV3_4G014860Watermelon (97103) v1cucwmB372
CsaV3_4G014860Watermelon (97103) v2cucwmbB288
CsaV3_4G014860Wax gourdcucwgoB431