CsaV3_4G013400 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G013400
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRibonuclease 3-like protein
Locationchr4 : 9718303 .. 9720676 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACCAATTGAGCGCATACTATCTTATAAGTTTAAGAACAAGAAGCTGTTGGAAGAAGCCCTCACCCACTCCTCCTACCTCAACTCTCCCTCCTATGACCGCCTCGAGTTCATCGGAGATTCAGCTATTGGCCTCGCTATTTCCACTTACTTTTTTCCCCTTTATCCGGACCTCAATCAAGGCCAACTCACTTTACTTAGTGCTGCTAACGTTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCTCCATAGATTGTATAGTTATGTTAGACGCAACGCAGACGATCTTGATGATAATGTTAGAGAGTTTGCCGATGCCGTCGCTCTAGAAGACAACTCAATTCCCTATGGTGGTTGGTGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGATGTTGAGTTTGATCTTCAAAAACTATGGGCGGTGAGTTCTTAGTTACATTTGAAGTATGTTTAATATTATTACTTTTACTAGCTACACACCAATTAGTTCTCTTTTTTTCTTTTTTTTTCAATATTTTGTAGATTATTAAGGATTTTTTAAAGCCTATCTATACTCCTGAAGACTTAAAGGCAGATCCCCAACCTGTAACTCTGCTCTTTGAAGATTGCCAGAAAAAAGGGAAGCAGGTTCATATTGAGAATCAGGAAAAGGGTTCCACGTACGTCGCGAAAGTCTATGTTGACTGTAGGCCTGTTGCTTCTGGCTTTTCGAAGCAAAAACCAATCGCAAGGCTTAATGCTGCCCGAGAAGCTCTTATCATACTGTCGGATTCTACGGATACCAAAATTAAAAGGGTTGTAACTATTGATGGTATTGATGGTTCGTTTGAAATTGAAGGGGCAAAGCAGAAGCTACATGATTTTTGTTGCAGGAAAAAGTGGCAGAGTCCAAGTTACAGGTAAATACTATATGATATTTGAGACGTTGCATACTTGCATTGTTTGGACTCTGAATTAGGAGGTAGTTTAGATGTTGTAGTTGTGGATTTTTCATTTACAAGTATGAACACTCTAACTTATATATCTGCTTTCTAACCAAGTGGGAAATTGAGTTCTTCAATAATTATGATGAAATGCACCTTTTTAGGCTTGCCTGCTTCAATTGTAGTCTTGTAATCTTATATCTTCACCAAACTACTTTCGTTCTTTCTGTTCATGGACATGTTATTTTTTTCTCTCAAATTTTAAGATTCATTTTAGTTGTCAATACTCACCTGTTCTCTTTTTTGTTTTTTACAAGGCATGATGTTAGTTTCAGCAATGACATTGAACTATTCAGCTAAATTTGATGTTAATATATTTGTTAAATGGTAAAAAGAGAACACTAGGTTTACGTGAAAAACCTTAAAACAGGAAGAAAGAACCACGATAGAGAGTAACTTTTTATTATTTTCACACACATTGAAAGTTACAAGGGAAGATAACTTTAAAAGTTTTAGCAAGCATTAATACAAAAAAAGGAAATAAACTTAGGGTAAACTACAATATTAAAATACTCTCAACGCAATAAACTATCAACAAAGCCTCTTGTTTCCAACAATATCTATACACTGATTTGTTAAAACTTGTGTTCTTTTGAATCTCCATCCTCTGTGCAATATACTTTTACCTTGTATGAGTAAAACTACACAAACTTGGTTTGCTTCCTTTTACTTTTCCTTCTTAGATGTTGATTTTTTATGTGAATGAACTCTTGGATACCTGTTTGCATTATATCGAGTATTGTTTTAAAAGGTCTTCCTGGACACACGCCTAGGCTCAAGGATCAGGTCTGGCACATTTCTTTTCCAAGGTGACGCTCACAAAATAAGACGTACACCTTTTGTGAAGCCTCAAGGCTCCTTGGAAAGTAGTAATAATTAGAGTGTTTTCTTCTTTTTTAACTAAAAAATATATATTTAGTAAGGCTAAATGCAAATTTTATTTTGTTTGGAAGGTTTTTTTCTTTCATATTTTTGGTTCAACTCTGCTCTCTCCTGAATGTAATACTTTCATGTATATATTGTATGCTTAAAAAAATCCTCTTTTTTTTTCTTGAGTTTAAGCTCTAGAAGAATATTGCGCTTTTATTGCAAGTCATTTTTTGGGTCAGAAACAAAAGTTCAACGCAGATCATCTCCTTTTTCCAACGTGTTCAACCACTAAACACCTCATTGATTTCTTACTTGCAGTAAAGAAGTTCTTGGACACCCACATGGAAGAAGATTTGTTTGCTGTGTTAAAATTTCCACTTTTAATGATACGCACTCTATAATCGGAGATGAGAAGTCAAGAGTAAAAGAGGCAGAGAACTCTGCAGCCTCTTTGATGATTCGTGATTTACAGAAAAGAAAGTATCTCTAA

mRNA sequence

ATGACACCAATTGAGCGCATACTATCTTATAAGTTTAAGAACAAGAAGCTGTTGGAAGAAGCCCTCACCCACTCCTCCTACCTCAACTCTCCCTCCTATGACCGCCTCGAGTTCATCGGAGATTCAGCTATTGGCCTCGCTATTTCCACTTACTTTTTTCCCCTTTATCCGGACCTCAATCAAGGCCAACTCACTTTACTTAGTGCTGCTAACGTTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCTCCATAGATTGTATAGTTATGTTAGACGCAACGCAGACGATCTTGATGATAATGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGATGTTGAGTTTGATCTTCAAAAACTATGGGCGATTATTAAGGATTTTTTAAAGCCTATCTATACTCCTGAAGACTTAAAGGCAGATCCCCAACCTGTAACTCTGCTCTTTGAAGATTGCCAGAAAAAAGGGAAGCAGGTTCATATTGAGAATCAGGAAAAGGGTTCCACGTACGTCGCGAAAGTCTATGTTGACTGTAGGCCTGTTGCTTCTGGCTTTTCGAAGCAAAAACCAATCGCAAGGCTTAATGCTGCCCGAGAAGCTCTTATCATACTGTCGGATTCTACGGATACCAAAATTAAAAGGGTTGTAACTATTGATGGTATTGATGGTTCGTTTGAAATTGAAGGGGCAAAGCAGAAGCTACATGATTTTTGTTGCAGGAAAAAGTGGCAGAGTCCAAGTTACAGTAAAGAAGTTCTTGGACACCCACATGGAAGAAGATTTGTTTGCTGTGTTAAAATTTCCACTTTTAATGATACGCACTCTATAATCGGAGATGAGAAGTCAAGAGTAAAAGAGGCAGAGAACTCTGCAGCCTCTTTGATGATTCGTGATTTACAGAAAAGAAAGTATCTCTAA

Coding sequence (CDS)

ATGACACCAATTGAGCGCATACTATCTTATAAGTTTAAGAACAAGAAGCTGTTGGAAGAAGCCCTCACCCACTCCTCCTACCTCAACTCTCCCTCCTATGACCGCCTCGAGTTCATCGGAGATTCAGCTATTGGCCTCGCTATTTCCACTTACTTTTTTCCCCTTTATCCGGACCTCAATCAAGGCCAACTCACTTTACTTAGTGCTGCTAACGTTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCTCCATAGATTGTATAGTTATGTTAGACGCAACGCAGACGATCTTGATGATAATGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGATGTTGAGTTTGATCTTCAAAAACTATGGGCGATTATTAAGGATTTTTTAAAGCCTATCTATACTCCTGAAGACTTAAAGGCAGATCCCCAACCTGTAACTCTGCTCTTTGAAGATTGCCAGAAAAAAGGGAAGCAGGTTCATATTGAGAATCAGGAAAAGGGTTCCACGTACGTCGCGAAAGTCTATGTTGACTGTAGGCCTGTTGCTTCTGGCTTTTCGAAGCAAAAACCAATCGCAAGGCTTAATGCTGCCCGAGAAGCTCTTATCATACTGTCGGATTCTACGGATACCAAAATTAAAAGGGTTGTAACTATTGATGGTATTGATGGTTCGTTTGAAATTGAAGGGGCAAAGCAGAAGCTACATGATTTTTGTTGCAGGAAAAAGTGGCAGAGTCCAAGTTACAGTAAAGAAGTTCTTGGACACCCACATGGAAGAAGATTTGTTTGCTGTGTTAAAATTTCCACTTTTAATGATACGCACTCTATAATCGGAGATGAGAAGTCAAGAGTAAAAGAGGCAGAGAACTCTGCAGCCTCTTTGATGATTCGTGATTTACAGAAAAGAAAGTATCTCTAA

Protein sequence

MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDDNAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDCQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEVLGHPHGRRFVCCVKISTFNDTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL
Homology
[Close]
BLAST of CsaV3_4G013400 vs. NCBI nr
Match: XP_008449147.1 (PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 499.2 bits (1284), Expect = 1.0e-137
Identity = 267/334 (79.94%), Postives = 283/334 (84.73%), Query Frame = 0 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MT IER LSYKFKNKKLLE ALTHSSY N+ SYDRLEFIGDSAIGLAIS YFF LYPDL+
Sbjct: 1   MTAIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLD 60

Query: 61  QGQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDDN-------------------- 120
           QG+LTLL AANVSTEKLARVAVLH LY YVRR+A DLDDN                    
Sbjct: 61  QGRLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGL 120

Query: 121 --APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDC 180
             APKVLADIVESVAGAIYVDVEFDLQKLWAIIKD LKPIYTPEDL+A+PQPVTLLFE C
Sbjct: 121 KKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVC 180

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QK GKQV I+NQEKGS  VA+VYVD   VASG SKQKPIARLNAAR+ALIILSDS DTKI
Sbjct: 181 QKNGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKI 240

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYS-KEVLGHPHGRRFVCCVKISTFN 300
           K VVTIDGIDGSFEIEGA QKLHDFC RKKWQ+PSYS +EVLG PH RRFVC VKIST++
Sbjct: 241 KTVVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSYSVEEVLGRPHERRFVCSVKISTYD 300

Query: 301 DTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 312
           DTHSIIGDEKSRVKEA+NSAASLMIR+LQ+RKYL
Sbjct: 301 DTHSIIGDEKSRVKEAKNSAASLMIRNLQERKYL 334

[Close]
BLAST of CsaV3_4G013400 vs. NCBI nr
Match: KGN53952.1 (hypothetical protein Csa_4G192730 [Cucumis sativus])

HSP 1 Score: 491.9 bits (1265), Expect = 1.6e-135
Identity = 252/276 (91.30%), Postives = 253/276 (91.67%), Query Frame = 0 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN
Sbjct: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60

Query: 61  QGQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDDN-------------------- 120
           QGQLTLL AANVSTEKLARVAVLHRLYSYVRRNADDLDDN                    
Sbjct: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 120

Query: 121 --APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDC 180
             APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDL+ADPQPVTLLFEDC
Sbjct: 121 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 180

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI
Sbjct: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 255
           KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY
Sbjct: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 276

[Close]
BLAST of CsaV3_4G013400 vs. NCBI nr
Match: XP_011654357.1 (PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus])

HSP 1 Score: 491.9 bits (1265), Expect = 1.6e-135
Identity = 252/276 (91.30%), Postives = 253/276 (91.67%), Query Frame = 0 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN
Sbjct: 380 MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 439

Query: 61  QGQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDDN-------------------- 120
           QGQLTLL AANVSTEKLARVAVLHRLYSYVRRNADDLDDN                    
Sbjct: 440 QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 499

Query: 121 --APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDC 180
             APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDL+ADPQPVTLLFEDC
Sbjct: 500 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 559

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI
Sbjct: 560 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 619

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 255
           KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY
Sbjct: 620 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 655

[Close]
BLAST of CsaV3_4G013400 vs. NCBI nr
Match: XP_008449146.1 (PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo])

HSP 1 Score: 423.3 bits (1087), Expect = 7.1e-115
Identity = 228/331 (68.88%), Postives = 257/331 (77.64%), Query Frame = 0 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +ERILSYKFKNKKLLEEALTH SY +S SY+RLEFIGDSAIGLA++ YFF  YP+L+QGQ
Sbjct: 8   VERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAYPNLHQGQ 67

Query: 64  LTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDD----------------------NA 123
           L+LL AANVSTEKLARVAV H LY+YVRRNA  +D                        A
Sbjct: 68  LSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSSVPYGGLMKA 127

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDCQKK 183
           PKVLADIVESVAGA+YVDV FDLQKLW II+  L+PIYT E+L+ +PQPVT+LF+ CQ+ 
Sbjct: 128 PKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFDVCQRN 187

Query: 184 GKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
           GKQV I+N + GS  +A VYVD   VASG S QK IARLNAAREALI LS S DTKIK V
Sbjct: 188 GKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGSMDTKIKTV 247

Query: 244 VTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYS-KEVLGHPHGRRFVCCVKISTFNDTH 303
           VTI+GID SFEIEGAKQKLHDFCCRKKWQ P YS ++ LG  HGRRFVC VKI T   T 
Sbjct: 248 VTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVKIPTCYGTF 307

Query: 304 SIIGDEKSRVKEAENSAASLMIRDLQKRKYL 312
            I+GDEKSRVK+AENSAASLMIR LQ+RK+L
Sbjct: 308 YIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of CsaV3_4G013400 vs. NCBI nr
Match: XP_016900632.1 (PREDICTED: ribonuclease 3-like protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 409.5 bits (1051), Expect = 1.1e-110
Identity = 219/276 (79.35%), Postives = 229/276 (82.97%), Query Frame = 0 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MT IER LSYKFKNKKLLE ALTHSSY N+ SYDRLEFIGDSAIGLAIS YFF LYPDL+
Sbjct: 1   MTAIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLD 60

Query: 61  QGQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDDN-------------------- 120
           QG+LTLL AANVSTEKLARVAVLH LY YVRR+A DLDDN                    
Sbjct: 61  QGRLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGL 120

Query: 121 --APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDC 180
             APKVLADIVESVAGAIYVDVEFDLQKLWAIIKD LKPIYTPEDL+A+PQPVTLLFE C
Sbjct: 121 KKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVC 180

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QK GKQV I+NQEKGS  VA+VYVD   VASG SKQKPIARLNAAR+ALIILSDS DTKI
Sbjct: 181 QKNGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKI 240

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 255
           K VVTIDGIDGSFEIEGA QKLHDFC RKKWQ+PSY
Sbjct: 241 KTVVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSY 276

[Close]
BLAST of CsaV3_4G013400 vs. TAIR10
Match: AT3G20420.1 (RNAse THREE-like protein 2)

HSP 1 Score: 284.6 bits (727), Expect = 7.1e-77
Identity = 161/336 (47.92%), Postives = 220/336 (65.48%), Query Frame = 0 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           M  +E+IL+YKF NK LL+EA+TH+S  + PSY+RLEFIGDSAIGLAIS Y +  YP L 
Sbjct: 60  MEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSLE 119

Query: 61  QGQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDD--------------------- 120
              L+LL AANVSTEKLARV++ H LYS++RRNA  LD+                     
Sbjct: 120 PHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYGG 179

Query: 121 --NAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFED 180
              APKVLAD+ ES+AGA+YVDV FDLQ+LW I +  L+PI T +DL+  PQPV++LF+ 
Sbjct: 180 LVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFKL 239

Query: 181 CQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTK 240
           C K  K++ I+N + G+  +A +Y+D   +ASG ++ K IARL AA+EAL  LS+     
Sbjct: 240 CHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEV--FP 299

Query: 241 IKRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYS-KEVLGHPHGRRFVCCVKIS-T 300
           ++ V+  D ++   ++  AK KL++ C +KKW  P YS +E      G+RFVC  KI  T
Sbjct: 300 VEMVIDEDSVE--IQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKIT 359

Query: 301 FNDTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 312
              T  + GDE+S++K+AE+S+A  MIR L+K  YL
Sbjct: 360 EEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]
BLAST of CsaV3_4G013400 vs. TAIR10
Match: AT1G01040.2 (dicer-like 1)

HSP 1 Score: 171.8 bits (434), Expect = 6.7e-43
Identity = 121/347 (34.87%), Postives = 173/347 (49.86%), Query Frame = 0 

Query: 4    IERILSYKFKNKKLLEEALTHSSYLNS--PSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 63
            +ER L Y+FK K LL EA+TH+S  +S    Y RLEF+GD+ +   I+ + F  Y  L  
Sbjct: 1563 LERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPP 1622

Query: 64   GQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDL------------------------ 123
            G+LT L AA V+ E  ARVAV H+L+ Y+R  +  L                        
Sbjct: 1623 GRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFG 1682

Query: 124  --DDNAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLF 183
              D  APKVL DIVES+AGAI++D   D    W + +  L+P+ TPE L     PV  L 
Sbjct: 1683 LGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRELQ 1742

Query: 184  EDCQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTD 243
            E CQ++ + +  +    G+T   +V++D   V    + QK +A+  AAR AL  L +   
Sbjct: 1743 ERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEI 1802

Query: 244  TKIKRVVTIDGIDGSFEIEG------------AKQKLHDFCCRKKWQSPSYSKEVLGHP- 303
             + K     +G  G  + E              +Q L+D C RK W  PSY     G P 
Sbjct: 1803 AESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPA 1862

Query: 304  HGRRFVCCVKISTFND--THSIIGDEKSRVKEAENSAASLMIRDLQK 308
            H +RF   V+++T +   T   IG+    VK+A++SAA L++  L K
Sbjct: 1863 HAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1907

[Close]
BLAST of CsaV3_4G013400 vs. TAIR10
Match: AT5G45150.1 (RNAse THREE-like protein 3)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-32
Identity = 93/262 (35.50%), Postives = 147/262 (56.11%), Query Frame = 0 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +E+IL+Y F NK LL+E LTH+   NSP +  L F+G+SA+ LA + + +  YP L    
Sbjct: 418 VEKILNYSFVNKTLLKELLTHN---NSPLFQGLMFVGESALSLAFTKHLYLTYPMLEPKD 477

Query: 64  LTLLSAANVSTEKLARVAVLHRLY-SYV-------RRNADDL------DD-----NAPKV 123
           L++L  AN   +K A VAV   +Y S++       +   D +      DD      APK+
Sbjct: 478 LSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDDPYRVVKAPKI 537

Query: 124 LADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKAD-PQPVTLLFEDCQKKGK 183
           L +++  VAGA+Y+DV++++Q+L  I +  L+PIYT +DL+    QP  +LF    K GK
Sbjct: 538 LVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLMLFRLADKHGK 597

Query: 184 QVHIENQEKGST--YVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
           Q+     + G +   +A+VY+D   +ASG +K+   A+L AA EA+  LS+     I+++
Sbjct: 598 QIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLSEC--MPIEKI 657

[Close]
BLAST of CsaV3_4G013400 vs. TAIR10
Match: AT4G15417.1 (RNAse II-like 1)

HSP 1 Score: 128.6 bits (322), Expect = 6.5e-30
Identity = 90/228 (39.47%), Postives = 126/228 (55.26%), Query Frame = 0 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLN--SPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 63
           +E+IL+YKFK+K LL +A T +SY++  S SY+ LE +GDS + + I   F  LYP    
Sbjct: 32  LEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLYPKEAP 91

Query: 64  GQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDD--------------------NA 123
           G LT L A NV TEKLARVAV H+LYSY+R     L++                      
Sbjct: 92  GPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEAMEKYPLHSNGLLKV 151

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDCQKK 183
           PKVLADIVES  GAI++D     + +W +IK  L+PI   + +K+   P+T L E CQK+
Sbjct: 152 PKVLADIVESTIGAIFMDCN-STETVWKVIKPLLEPIIHLDKMKS--HPMTELNEMCQKR 211

Query: 184 G-KQVHIENQEKGSTYVAKVYVDCRPVASGFSK-QKPIARLNAAREAL 208
             K    +  E+  TY    +++ + V  G    +K  AR  AA+ A+
Sbjct: 212 NLKLTSKDTWEENQTYC--FHIEDKFVGCGHHPVKKETARNFAAKNAI 254

[Close]
BLAST of CsaV3_4G013400 vs. TAIR10
Match: AT3G43920.2 (dicer-like 3)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-25
Identity = 79/307 (25.73%), Postives = 131/307 (42.67%), Query Frame = 0 

Query: 4    IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
            +ER + ++F  K LL+EA+THSS   S SY+RLEF+GDS +   I+ + F  Y     G+
Sbjct: 1201 LERKIQHEFSAKFLLKEAITHSSLRESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGE 1260

Query: 64   LTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDD----------------------NA 123
            +T L +A V+ E  A+VAV + L+++++R A  L+                         
Sbjct: 1261 MTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQG 1320

Query: 124  PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDCQKK 183
            PK L D+VES+AGA+ +D   DL ++W + +  L P+ TP+ L+    P   L E C   
Sbjct: 1321 PKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQL--PPYRELNELCDSL 1380

Query: 184  GKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
            G    ++    G    A + +    V       +   +L   + A  +L+      I R 
Sbjct: 1381 GYFFRVKCSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQLEKRNISRK 1440

Query: 244  VTIDGIDGSFEIE----------------------------------GAKQKLHDFCCRK 255
             ++     S ++                                   G +  LH+FC + 
Sbjct: 1441 TSLGDNQSSMDVNLACNHSDRETLTSETTEIQSIVIPFIGPINMKKGGPRGTLHEFCKKH 1500

[Close]
BLAST of CsaV3_4G013400 vs. Swiss-Prot
Match: sp|Q9LTQ0|RTL2_ARATH (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.3e-75
Identity = 161/336 (47.92%), Postives = 220/336 (65.48%), Query Frame = 0 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           M  +E+IL+YKF NK LL+EA+TH+S  + PSY+RLEFIGDSAIGLAIS Y +  YP L 
Sbjct: 60  MEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSLE 119

Query: 61  QGQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDD--------------------- 120
              L+LL AANVSTEKLARV++ H LYS++RRNA  LD+                     
Sbjct: 120 PHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYGG 179

Query: 121 --NAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFED 180
              APKVLAD+ ES+AGA+YVDV FDLQ+LW I +  L+PI T +DL+  PQPV++LF+ 
Sbjct: 180 LVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFKL 239

Query: 181 CQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTK 240
           C K  K++ I+N + G+  +A +Y+D   +ASG ++ K IARL AA+EAL  LS+     
Sbjct: 240 CHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEV--FP 299

Query: 241 IKRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYS-KEVLGHPHGRRFVCCVKIS-T 300
           ++ V+  D ++   ++  AK KL++ C +KKW  P YS +E      G+RFVC  KI  T
Sbjct: 300 VEMVIDEDSVE--IQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKIT 359

Query: 301 FNDTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 312
              T  + GDE+S++K+AE+S+A  MIR L+K  YL
Sbjct: 360 EEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]
BLAST of CsaV3_4G013400 vs. Swiss-Prot
Match: sp|Q6ATG6|RTL2_ORYSJ (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 203.8 bits (517), Expect = 2.9e-51
Identity = 123/284 (43.31%), Postives = 164/284 (57.75%), Query Frame = 0 

Query: 4   IERILSYKFKNKKLLEEALTHSSYL-NSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQG 63
           +ER+L Y+F++ +LLEEALTH S+  ++ SY RLEF+GDSA+GLA S + +   P L  G
Sbjct: 40  VERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPG 99

Query: 64  QLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLD------------------------ 123
            L+ L AAN+STEKLARVAV H LY  +RRN   LD                        
Sbjct: 100 PLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPYG 159

Query: 124 ---DNAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLF 183
                APKVLADIVE++A A+YVD +FDL+KLW + +   +PI T E +  D QPVT+L 
Sbjct: 160 GSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETI--DEQPVTMLH 219

Query: 184 EDCQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTD 243
           E CQK GK    +  +KG   V  V+V    V  G S+QK IA+LNAAR+A   L+ +  
Sbjct: 220 ELCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGA-- 279

Query: 244 TKIKRVVTIDGI-----DGSFEIEGAKQKLHDFCCRKKWQSPSY 255
              K+ V   G+     D   E+   KQKL++ C R+ W  P +
Sbjct: 280 ---KKQVLTTGVGNGLGDEIGELRECKQKLNEQCSRQNWPKPIF 316

[Close]
BLAST of CsaV3_4G013400 vs. Swiss-Prot
Match: sp|Q8LMR2|DCL1_ORYSJ (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL1 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.3e-42
Identity = 115/335 (34.33%), Postives = 177/335 (52.84%), Query Frame = 0 

Query: 4    IERILSYKFKNKKLLEEALTHSSYLNS--PSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 63
            ++ +L  +F+NK LL EA+TH+S  +S    Y RLEF+GD+ +   I+ + F  Y DL  
Sbjct: 1541 LKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPP 1600

Query: 64   GQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDL------------------------ 123
            G+LT L AA V+ E  ARVAV H+L+ ++R  +  L                        
Sbjct: 1601 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFG 1660

Query: 124  --DDNAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLF 183
              D  APKVL DIVES+AGAI++D  +D   +W + +  L P+ TPE L     PV  L 
Sbjct: 1661 LGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPM--HPVRELQ 1720

Query: 184  EDCQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTD 243
            E CQ++ + +  +    G+    +V+VD   +    + QK +A+  AAR AL++L +  +
Sbjct: 1721 ERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVLKEK-E 1780

Query: 244  TKIKRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEVLGHP-HGRRFVCCVKIS 303
            T  K+    DG   +      +Q L+D C R++W  P Y     G P H +RFV  V+++
Sbjct: 1781 TATKKEDERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVN 1840

Query: 304  TFND--THSIIGDEKSRVKEAENSAASLMIRDLQK 308
            T +   T   IG+    VK+A++SAA L++  L +
Sbjct: 1841 TSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNR 1872

[Close]
BLAST of CsaV3_4G013400 vs. Swiss-Prot
Match: sp|Q9SP32|DCL1_ARATH (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 1.2e-41
Identity = 121/347 (34.87%), Postives = 173/347 (49.86%), Query Frame = 0 

Query: 4    IERILSYKFKNKKLLEEALTHSSYLNS--PSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 63
            +ER L Y+FK K LL EA+TH+S  +S    Y RLEF+GD+ +   I+ + F  Y  L  
Sbjct: 1562 LERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPP 1621

Query: 64   GQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDL------------------------ 123
            G+LT L AA V+ E  ARVAV H+L+ Y+R  +  L                        
Sbjct: 1622 GRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFG 1681

Query: 124  --DDNAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLF 183
              D  APKVL DIVES+AGAI++D   D    W + +  L+P+ TPE L     PV  L 
Sbjct: 1682 LGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRELQ 1741

Query: 184  EDCQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTD 243
            E CQ++ + +  +    G+T   +V++D   V    + QK +A+  AAR AL  L +   
Sbjct: 1742 ERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEI 1801

Query: 244  TKIKRVVTIDGIDGSFEIEG------------AKQKLHDFCCRKKWQSPSYSKEVLGHP- 303
             + K     +G  G  + E              +Q L+D C RK W  PSY     G P 
Sbjct: 1802 AESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPA 1861

Query: 304  HGRRFVCCVKISTFND--THSIIGDEKSRVKEAENSAASLMIRDLQK 308
            H +RF   V+++T +   T   IG+    VK+A++SAA L++  L K
Sbjct: 1862 HAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906

[Close]
BLAST of CsaV3_4G013400 vs. Swiss-Prot
Match: sp|Q9FKF0|RTL3_ARATH (Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.5e-31
Identity = 93/262 (35.50%), Postives = 147/262 (56.11%), Query Frame = 0 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +E+IL+Y F NK LL+E LTH+   NSP +  L F+G+SA+ LA + + +  YP L    
Sbjct: 418 VEKILNYSFVNKTLLKELLTHN---NSPLFQGLMFVGESALSLAFTKHLYLTYPMLEPKD 477

Query: 64  LTLLSAANVSTEKLARVAVLHRLY-SYV-------RRNADDL------DD-----NAPKV 123
           L++L  AN   +K A VAV   +Y S++       +   D +      DD      APK+
Sbjct: 478 LSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDDPYRVVKAPKI 537

Query: 124 LADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKAD-PQPVTLLFEDCQKKGK 183
           L +++  VAGA+Y+DV++++Q+L  I +  L+PIYT +DL+    QP  +LF    K GK
Sbjct: 538 LVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLMLFRLADKHGK 597

Query: 184 QVHIENQEKGST--YVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
           Q+     + G +   +A+VY+D   +ASG +K+   A+L AA EA+  LS+     I+++
Sbjct: 598 QIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLSEC--MPIEKI 657

[Close]
BLAST of CsaV3_4G013400 vs. TrEMBL
Match: tr|A0A1S3BMA5|A0A1S3BMA5_CUCME (ribonuclease 3-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491098 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 6.7e-138
Identity = 267/334 (79.94%), Postives = 283/334 (84.73%), Query Frame = 0 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MT IER LSYKFKNKKLLE ALTHSSY N+ SYDRLEFIGDSAIGLAIS YFF LYPDL+
Sbjct: 1   MTAIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLD 60

Query: 61  QGQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDDN-------------------- 120
           QG+LTLL AANVSTEKLARVAVLH LY YVRR+A DLDDN                    
Sbjct: 61  QGRLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGL 120

Query: 121 --APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDC 180
             APKVLADIVESVAGAIYVDVEFDLQKLWAIIKD LKPIYTPEDL+A+PQPVTLLFE C
Sbjct: 121 KKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVC 180

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QK GKQV I+NQEKGS  VA+VYVD   VASG SKQKPIARLNAAR+ALIILSDS DTKI
Sbjct: 181 QKNGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKI 240

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYS-KEVLGHPHGRRFVCCVKISTFN 300
           K VVTIDGIDGSFEIEGA QKLHDFC RKKWQ+PSYS +EVLG PH RRFVC VKIST++
Sbjct: 241 KTVVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSYSVEEVLGRPHERRFVCSVKISTYD 300

Query: 301 DTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 312
           DTHSIIGDEKSRVKEA+NSAASLMIR+LQ+RKYL
Sbjct: 301 DTHSIIGDEKSRVKEAKNSAASLMIRNLQERKYL 334

[Close]
BLAST of CsaV3_4G013400 vs. TrEMBL
Match: tr|A0A0A0L020|A0A0A0L020_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192730 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.1e-135
Identity = 252/276 (91.30%), Postives = 253/276 (91.67%), Query Frame = 0 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN
Sbjct: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60

Query: 61  QGQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDDN-------------------- 120
           QGQLTLL AANVSTEKLARVAVLHRLYSYVRRNADDLDDN                    
Sbjct: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 120

Query: 121 --APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDC 180
             APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDL+ADPQPVTLLFEDC
Sbjct: 121 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 180

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI
Sbjct: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 255
           KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY
Sbjct: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 276

[Close]
BLAST of CsaV3_4G013400 vs. TrEMBL
Match: tr|A0A1S3BM12|A0A1S3BM12_CUCME (ribonuclease 3-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103491097 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 4.7e-115
Identity = 228/331 (68.88%), Postives = 257/331 (77.64%), Query Frame = 0 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +ERILSYKFKNKKLLEEALTH SY +S SY+RLEFIGDSAIGLA++ YFF  YP+L+QGQ
Sbjct: 8   VERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAYPNLHQGQ 67

Query: 64  LTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDD----------------------NA 123
           L+LL AANVSTEKLARVAV H LY+YVRRNA  +D                        A
Sbjct: 68  LSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSSVPYGGLMKA 127

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDCQKK 183
           PKVLADIVESVAGA+YVDV FDLQKLW II+  L+PIYT E+L+ +PQPVT+LF+ CQ+ 
Sbjct: 128 PKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFDVCQRN 187

Query: 184 GKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
           GKQV I+N + GS  +A VYVD   VASG S QK IARLNAAREALI LS S DTKIK V
Sbjct: 188 GKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGSMDTKIKTV 247

Query: 244 VTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYS-KEVLGHPHGRRFVCCVKISTFNDTH 303
           VTI+GID SFEIEGAKQKLHDFCCRKKWQ P YS ++ LG  HGRRFVC VKI T   T 
Sbjct: 248 VTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVKIPTCYGTF 307

Query: 304 SIIGDEKSRVKEAENSAASLMIRDLQKRKYL 312
            I+GDEKSRVK+AENSAASLMIR LQ+RK+L
Sbjct: 308 YIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of CsaV3_4G013400 vs. TrEMBL
Match: tr|A0A1S4DXC9|A0A1S4DXC9_CUCME (ribonuclease 3-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491098 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 7.0e-111
Identity = 219/276 (79.35%), Postives = 229/276 (82.97%), Query Frame = 0 

Query: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60
           MT IER LSYKFKNKKLLE ALTHSSY N+ SYDRLEFIGDSAIGLAIS YFF LYPDL+
Sbjct: 1   MTAIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLD 60

Query: 61  QGQLTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDDN-------------------- 120
           QG+LTLL AANVSTEKLARVAVLH LY YVRR+A DLDDN                    
Sbjct: 61  QGRLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGL 120

Query: 121 --APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDC 180
             APKVLADIVESVAGAIYVDVEFDLQKLWAIIKD LKPIYTPEDL+A+PQPVTLLFE C
Sbjct: 121 KKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVC 180

Query: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240
           QK GKQV I+NQEKGS  VA+VYVD   VASG SKQKPIARLNAAR+ALIILSDS DTKI
Sbjct: 181 QKNGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKI 240

Query: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 255
           K VVTIDGIDGSFEIEGA QKLHDFC RKKWQ+PSY
Sbjct: 241 KTVVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSY 276

[Close]
BLAST of CsaV3_4G013400 vs. TrEMBL
Match: tr|A0A0A0L1E2|A0A0A0L1E2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192230 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 8.0e-107
Identity = 214/331 (64.65%), Postives = 249/331 (75.23%), Query Frame = 0 

Query: 4   IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 63
           +ERILSY F NK LLEEALTH SY  S SY+RLEF+GDSAIGLA++ YFF   P L+QG 
Sbjct: 8   LERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPHLHQGH 67

Query: 64  LTLLSAANVSTEKLARVAVLHRLYSYVRRNADDLDD----------------------NA 123
           L+LL AANVSTEKLARVAV H LY+YVRR++  +DD                       A
Sbjct: 68  LSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYGGMMKA 127

Query: 124 PKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFEDCQKK 183
           PKVLADIVESVAGA+YVDV FDLQKLW II+  L+PIYT E+L+ +PQPVT+LF+ CQ+ 
Sbjct: 128 PKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVCQRN 187

Query: 184 GKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKIKRV 243
           GKQV I++ + GS  +A V+VD + VASG S QK IARLNAAREALI LSDS DT+IK  
Sbjct: 188 GKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDTRIKTF 247

Query: 244 VTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEV-LGHPHGRRFVCCVKISTFNDTH 303
           VTIDGID SFEIEGAKQKLHD C ++KWQ P+YS E  LG  H R FVC VKI+T   T 
Sbjct: 248 VTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKIATCYGTF 307

Query: 304 SIIGDEKSRVKEAENSAASLMIRDLQKRKYL 312
            I+GDEKSRVK+AENSAASLMIR LQ+RK+L
Sbjct: 308 YIVGDEKSRVKDAENSAASLMIRALQERKHL 338

The following BLAST results are available for this feature:
BLAST of CsaV3_4G013400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008449147.11.0e-13779.94PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Cucumis melo][more]
KGN53952.11.6e-13591.30hypothetical protein Csa_4G192730 [Cucumis sativus][more]
XP_011654357.11.6e-13591.30PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus][more]
XP_008449146.17.1e-11568.88PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo][more]
XP_016900632.11.1e-11079.35PREDICTED: ribonuclease 3-like protein 2 isoform X2 [Cucumis melo][more]
BLAST of CsaV3_4G013400 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20420.17.1e-7747.92RNAse THREE-like protein 2[more]
AT1G01040.26.7e-4334.87dicer-like 1[more]
AT5G45150.11.4e-3235.50RNAse THREE-like protein 3[more]
AT4G15417.16.5e-3039.47RNAse II-like 1[more]
AT3G43920.22.2e-2525.73dicer-like 3[more]
BLAST of CsaV3_4G013400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LTQ0|RTL2_ARATH1.3e-7547.92Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1[more]
sp|Q6ATG6|RTL2_ORYSJ2.9e-5143.31Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0... [more]
sp|Q8LMR2|DCL1_ORYSJ9.3e-4234.33Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL... [more]
sp|Q9SP32|DCL1_ARATH1.2e-4134.87Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV... [more]
sp|Q9FKF0|RTL3_ARATH2.5e-3135.50Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1[more]
BLAST of CsaV3_4G013400 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BMA5|A0A1S3BMA5_CUCME6.7e-13879.94ribonuclease 3-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491098... [more]
tr|A0A0A0L020|A0A0A0L020_CUCSA1.1e-13591.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192730 PE=4 SV=1[more]
tr|A0A1S3BM12|A0A1S3BM12_CUCME4.7e-11568.88ribonuclease 3-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103491097 PE=4 SV=1[more]
tr|A0A1S4DXC9|A0A1S4DXC9_CUCME7.0e-11179.35ribonuclease 3-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491098... [more]
tr|A0A0A0L1E2|A0A0A0L1E2_CUCSA8.0e-10764.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192230 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: INTERPRO
TermDefinition
IPR036389RNase_III_sf
IPR000999RNase_III_dom
IPR014720dsRBD_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0006396 RNA processing
cellular_component GO:0005575 cellular_component
molecular_function GO:0004525 ribonuclease III activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G013400.1CsaV3_4G013400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 236..306
e-value: 1.8E-5
score: 34.2
coord: 150..211
e-value: 0.019
score: 21.4
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 236..305
e-value: 1.7E-11
score: 44.5
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 149..212
score: 8.664
IPR014720Double-stranded RNA-binding domainCDDcd00048DSRMcoord: 236..305
e-value: 1.39394E-10
score: 55.3563
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 16..144
e-value: 8.0E-35
score: 131.7
IPR000999Ribonuclease III domainPFAMPF14622Ribonucleas_3_3coord: 14..123
e-value: 1.2E-19
score: 70.6
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 1..121
score: 34.508
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 16..144
e-value: 1.20025E-39
score: 136.589
NoneNo IPR availableGENE3DG3DSA:3.30.160.20coord: 146..222
e-value: 1.3E-7
score: 33.6
NoneNo IPR availableGENE3DG3DSA:3.30.160.20coord: 229..310
e-value: 1.1E-13
score: 52.8
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 4..218
NoneNo IPR availablePANTHERPTHR14950:SF35RIBONUCLEASE 3-LIKE PROTEIN 2-RELATEDcoord: 4..218
NoneNo IPR availableSUPERFAMILYSSF54768dsRNA-binding domain-likecoord: 103..210
NoneNo IPR availableSUPERFAMILYSSF54768dsRNA-binding domain-likecoord: 235..308
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3DG3DSA:1.10.1520.10coord: 1..96
e-value: 1.4E-27
score: 98.4
coord: 97..142
e-value: 1.1E-11
score: 46.4
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILYSSF69065RNase III domain-likecoord: 3..141

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G013400Melon (DHL92) v3.5.1cucmeB328
CsaV3_4G013400Melon (DHL92) v3.6.1cucmedB321
CsaV3_4G013400Watermelon (Charleston Gray)cucwcgB320
CsaV3_4G013400Watermelon (97103) v1cucwmB356
CsaV3_4G013400Watermelon (97103) v2cucwmbB309
CsaV3_4G013400Wax gourdcucwgoB410
CsaV3_4G013400Silver-seed gourdcarcucB0313
CsaV3_4G013400Silver-seed gourdcarcucB0662
CsaV3_4G013400Cucumber (Gy14) v2cgybcucB171
CsaV3_4G013400Cucumber (Gy14) v1cgycucB530
CsaV3_4G013400Cucurbita maxima (Rimu)cmacucB0792
CsaV3_4G013400Cucurbita maxima (Rimu)cmacucB1017
CsaV3_4G013400Cucurbita moschata (Rifu)cmocucB0774
CsaV3_4G013400Cucurbita moschata (Rifu)cmocucB1000
CsaV3_4G013400Cucurbita pepo (Zucchini)cpecucB0085
CsaV3_4G013400Cucurbita pepo (Zucchini)cpecucB0612
CsaV3_4G013400Wild cucumber (PI 183967)cpicucB213
CsaV3_4G013400Bottle gourd (USVL1VR-Ls)cuclsiB280