CsaV3_4G013340 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G013340
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	B3 domain-containing protein At2g31420-like
Location	chr4 : 9682599 .. 9683423 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCCGCCCTTCAACTTCCACCGCCGACCCCCCAAAAGAACAAGAAACCACACTCTCTACAAATGAAGAAATCAGCGATCAAAACCCGAGCGACCAGGACGATCACCTTCCACTAATAAAGAGAAAGAGAACCAGAATGAAACAACTCGCAAGGCGACACAAACTCTTTAGAGAAAAAAGACTAAAACGCCAACTCATCCACCCAGTCGACGATCCAATTCCCAAGTCCAAAGAAGAACCACGAGGCAAGGACTTCGTATTCGACTCAGAAACCGAAAGCGAGAGCGATACAGATCCAAATCAAGAAACCCTAATATTTAGGGTTTTGGCAGAAATGGTCGAATCAGAAAAAGATTCCCTCGAAATCATACCTGACGAATACAAGAATCTGATGATTTTCATGGGAGGATCGTGGAATTTTTGCCCTAGTTTGGTGATGGAGAAACGACTGAAGAAAGGGGATGTGGAGGAACGAAGAAATCGGCTGTTGATTCCACAAAGGAAGACGAGAACGAATTTTCTGGATGTTGAAGAAGAAGAGCAGTTGAACAGAGATGTTTGGTGGATGGTGGAGATTATTGAGCCTGATTGTACGGTGAGTTTGATTACGCTGAGTAAATGGGAAACGTGGAAGGGAGTGGCGTATGTTTTGATAACGGAGTGGAATGGATTGGTGGAGAGGAATGATTTGAAGGAAGGTGATTTGATGCAGCTATGGAGTTTTCGTGCCGGCGGCGACCGTGGACGGCTCTGTTTTATGCTTCTGGAGGTGGAAGAAATCCGAGAAGACGGTGGTGAAATTGCTGCCGCTGAATCTTAG

mRNA sequence

ATGGATTCCCGCCCTTCAACTTCCACCGCCGACCCCCCAAAAGAACAAGAAACCACACTCTCTACAAATGAAGAAATCAGCGATCAAAACCCGAGCGACCAGGACGATCACCTTCCACTAATAAAGAGAAAGAGAACCAGAATGAAACAACTCGCAAGGCGACACAAACTCTTTAGAGAAAAAAGACTAAAACGCCAACTCATCCACCCAGTCGACGATCCAATTCCCAAGTCCAAAGAAGAACCACGAGGCAAGGACTTCGTATTCGACTCAGAAACCGAAAGCGAGAGCGATACAGATCCAAATCAAGAAACCCTAATATTTAGGGTTTTGGCAGAAATGGTCGAATCAGAAAAAGATTCCCTCGAAATCATACCTGACGAATACAAGAATCTGATGATTTTCATGGGAGGATCGTGGAATTTTTGCCCTAGTTTGGTGATGGAGAAACGACTGAAGAAAGGGGATGTGGAGGAACGAAGAAATCGGCTGTTGATTCCACAAAGGAAGACGAGAACGAATTTTCTGGATGTTGAAGAAGAAGAGCAGTTGAACAGAGATGTTTGGTGGATGGTGGAGATTATTGAGCCTGATTGTACGGTGAGTTTGATTACGCTGAGTAAATGGGAAACGTGGAAGGGAGTGGCGTATGTTTTGATAACGGAGTGGAATGGATTGGTGGAGAGGAATGATTTGAAGGAAGGTGATTTGATGCAGCTATGGAGTTTTCGTGCCGGCGGCGACCGTGGACGGCTCTGTTTTATGCTTCTGGAGGTGGAAGAAATCCGAGAAGACGGTGGTGAAATTGCTGCCGCTGAATCTTAG

Coding sequence (CDS)

ATGGATTCCCGCCCTTCAACTTCCACCGCCGACCCCCCAAAAGAACAAGAAACCACACTCTCTACAAATGAAGAAATCAGCGATCAAAACCCGAGCGACCAGGACGATCACCTTCCACTAATAAAGAGAAAGAGAACCAGAATGAAACAACTCGCAAGGCGACACAAACTCTTTAGAGAAAAAAGACTAAAACGCCAACTCATCCACCCAGTCGACGATCCAATTCCCAAGTCCAAAGAAGAACCACGAGGCAAGGACTTCGTATTCGACTCAGAAACCGAAAGCGAGAGCGATACAGATCCAAATCAAGAAACCCTAATATTTAGGGTTTTGGCAGAAATGGTCGAATCAGAAAAAGATTCCCTCGAAATCATACCTGACGAATACAAGAATCTGATGATTTTCATGGGAGGATCGTGGAATTTTTGCCCTAGTTTGGTGATGGAGAAACGACTGAAGAAAGGGGATGTGGAGGAACGAAGAAATCGGCTGTTGATTCCACAAAGGAAGACGAGAACGAATTTTCTGGATGTTGAAGAAGAAGAGCAGTTGAACAGAGATGTTTGGTGGATGGTGGAGATTATTGAGCCTGATTGTACGGTGAGTTTGATTACGCTGAGTAAATGGGAAACGTGGAAGGGAGTGGCGTATGTTTTGATAACGGAGTGGAATGGATTGGTGGAGAGGAATGATTTGAAGGAAGGTGATTTGATGCAGCTATGGAGTTTTCGTGCCGGCGGCGACCGTGGACGGCTCTGTTTTATGCTTCTGGAGGTGGAAGAAATCCGAGAAGACGGTGGTGAAATTGCTGCCGCTGAATCTTAG

Protein sequence

MDSRPSTSTADPPKEQETTLSTNEEISDQNPSDQDDHLPLIKRKRTRMKQLARRHKLFREKRLKRQLIHPVDDPIPKSKEEPRGKDFVFDSETESESDTDPNQETLIFRVLAEMVESEKDSLEIIPDEYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEEEEQLNRDVWWMVEIIEPDCTVSLITLSKWETWKGVAYVLITEWNGLVERNDLKEGDLMQLWSFRAGGDRGRLCFMLLEVEEIREDGGEIAAAES

Homology

[Close]

BLAST of CsaV3_4G013340 vs. NCBI nr
Match: XP_004147556.1 (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus] >KGN53947.1 hypothetical protein Csa_4G192190 [Cucumis sativus])

HSP 1 Score: 533.1 bits (1372), Expect = 5.6e-148
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MDSRPSTSTADPPKEQETTLSTNEEISDQNPSDQDDHLPLIKRKRTRMKQLARRHKLFRE 60
           MDSRPSTSTADPPKEQETTLSTNEEISDQNPSDQDDHLPLIKRKRTRMKQLARRHKLFRE
Sbjct: 1   MDSRPSTSTADPPKEQETTLSTNEEISDQNPSDQDDHLPLIKRKRTRMKQLARRHKLFRE 60

Query: 61  KRLKRQLIHPVDDPIPKSKEEPRGKDFVFDSETEXXXXXDPNQETLIFRVLAEMVESEKD 120
           KRLKRQLIHPVDDPIPKSKEEPRGKDFVFDSETEXXXXXDPNQETLIFRVLAEMVESEKD
Sbjct: 61  KRLKRQLIHPVDDPIPKSKEEPRGKDFVFDSETEXXXXXDPNQETLIFRVLAEMVESEKD 120

Query: 121 SLEIIPDEYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEE 180
           SLEIIPDEYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEE
Sbjct: 121 SLEIIPDEYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEE 180

Query: 181 EEQLNRDVWWMVEIIEPDCTVSLITLSKWETWKGVAYVLITEWNGLVERNDLKEGDLMQL 240
           EEQLNRDVWWMVEIIEPDCTVSLITLSKWETWKGVAYVLITEWNGLVERNDLKEGDLMQL
Sbjct: 181 EEQLNRDVWWMVEIIEPDCTVSLITLSKWETWKGVAYVLITEWNGLVERNDLKEGDLMQL 240

Query: 241 WSFRAGGDRGRLCFMLLEVEEIREDGGEIAAAES 275
           WSFRAGGDRGRLCFMLLEVEEIREDGGEIAAAES
Sbjct: 241 WSFRAGGDRGRLCFMLLEVEEIREDGGEIAAAES 274

[Close]

BLAST of CsaV3_4G013340 vs. NCBI nr
Match: XP_008441972.1 (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo])

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 212/264 (80.30%), Postives = 228/264 (86.36%), Query Frame = 0


Query: 1   MDSRPSTSTADPPKEQETTLSTNEEISDQNPSDQDDHLPLIKRKRTRMKQLARRHKLFRE 60
           MDS  S+ +A+  +EQETT+STN EI+DQNPSD DDHLPLIKRKRTRMKQLARRHK  RE
Sbjct: 3   MDSNTSSPSANAQQEQETTVSTNGEITDQNPSDDDDHLPLIKRKRTRMKQLARRHKRDRE 62

Query: 61  KRLKRQLIHPVDDPIPKSKEEPRGKDFVFDSETEXXXXXDPNQETLIFRVLAEMVESEKD 120
           K LKR L HPV+DPIPKS EEP+GKD VFD+   XXXXX        F  LAE+VESE++
Sbjct: 63  KILKRPLKHPVNDPIPKSDEEPQGKDLVFDTXXXXXXXXXXXXXXXXFMALAEIVESERE 122

Query: 121 SLEIIPDEYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEE 180
            LE IP+EYK LMIFMGGSW+ CPSLVMEKRLKKGDVEERRNRLLIPQRKTRT FL+VEE
Sbjct: 123 FLENIPEEYKKLMIFMGGSWDVCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTTFLEVEE 182

Query: 181 EEQLNRDVWWMVEIIEPDCTVSLITLSKWETWKGVAYVLITEWNGLVERNDLKEGDLMQL 240
           EE+LN DVWWMVEIIEPDCTVSLITLSKWET KGVAYVLITEWNGLVERNDLKEGDLMQL
Sbjct: 183 EEKLNTDVWWMVEIIEPDCTVSLITLSKWETRKGVAYVLITEWNGLVERNDLKEGDLMQL 242

Query: 241 WSFRAGGDRGRLCFMLLEVEEIRE 265
           WSFRAGG RGRLCFMLLEVEE RE
Sbjct: 243 WSFRAGGGRGRLCFMLLEVEENRE 266

[Close]

BLAST of CsaV3_4G013340 vs. NCBI nr
Match: XP_023544949.1 (B3 domain-containing protein At2g31420-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.4 bits (651), Expect = 2.2e-64
Identity = 135/253 (53.36%), Postives = 181/253 (71.54%), Query Frame = 0


Query: 22  TNEEISDQNPS--DQDDHLPLIKRKRTRMKQLARRHKLFREKRLKRQLIHPVDDPI-PKS 81
           T++ + DQ+    + D+HL LIKRKR+  K+  +R KL +E+ LKR ++  +  P+   S
Sbjct: 20  TSDGVQDQDRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKERSLKRPIVQSIASPVLEAS 79

Query: 82  KEEPRGKDFVFDSETEXXXXXDPNQETLIFRVLAEMVESEKDSLEIIPDEYKNLMIFMGG 141
            E+P   D +FD+ETE     + + + L+     ++ E ++  ++ +P +YK+LMIFMG 
Sbjct: 80  AEQP---DIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRILVDGLPQDYKSLMIFMGA 139

Query: 142 SWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEEEEQLNRDVWWMVEIIEPD 201
           S N  P+ +++KRLKKGDV+ERRNRL+IPQRK R NFLD+EEEE+LN + WWMVE+IEPD
Sbjct: 140 SSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWMVEVIEPD 199

Query: 202 CTVSLITLSKWETWKGVAYVLITEWNGLVERNDLKEGDLMQLWSFR------AGGDRGRL 261
           C+VSLITLSKWET  G AYV ITEWNGLVERN+LKEGDL+QLWSFR        GD GRL
Sbjct: 200 CSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWSFRVHVGEGGDGDHGRL 259

Query: 262 CFMLLEVEEIRED 266
           CFMLLE+ E  +D
Sbjct: 260 CFMLLEICEEGDD 269

[Close]

BLAST of CsaV3_4G013340 vs. NCBI nr
Match: XP_022950597.1 (B3 domain-containing protein At2g31420-like [Cucurbita moschata])

HSP 1 Score: 251.1 bits (640), Expect = 4.2e-63
Identity = 131/243 (53.91%), Postives = 173/243 (71.19%), Query Frame = 0


Query: 28  DQNPSDQDDHLPLIKRKRTRMKQLARRHKLFREKRLKRQLIHPVDDPI-PKSKEEPRGKD 87
           DQ   + D+HL LIKRKR+  K+  +R KL +E+ LKR ++  +  P+   S E+P   D
Sbjct: 28  DQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKERSLKRPIVQSIASPVLEASAEQP---D 87

Query: 88  FVFDSETEXXXXXDPNQETLIFRVLAEMVESEKDSLEIIPDEYKNLMIFMGGSWNFCPSL 147
            +FD+ETE     + + + L+     ++ E ++   + +P  YK+LMIFMG S    P+ 
Sbjct: 88  IIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILADGLPQNYKSLMIFMGASSKSSPNF 147

Query: 148 VMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEEEEQLNRDVWWMVEIIEPDCTVSLITL 207
           +++KRLKKGDV+ERRNRL+IPQRK R NFLD+EEEE+LN + WW+VE+IEPDC+VSL+TL
Sbjct: 148 LLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWIVEVIEPDCSVSLMTL 207

Query: 208 SKWETWKGVAYVLITEWNGLVERNDLKEGDLMQLWSFRAGG----DRGRLCFMLLEVEEI 266
           SKWET  G AYV ITEWNGLVERN+LKEGDL+QLWSFR  G    D GRLCFMLLE+ E 
Sbjct: 208 SKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWSFRVHGGGDDDHGRLCFMLLEICEE 267

[Close]

BLAST of CsaV3_4G013340 vs. NCBI nr
Match: XP_022978264.1 (uncharacterized protein LOC111478299 [Cucurbita maxima])

HSP 1 Score: 249.6 bits (636), Expect = 1.2e-62
Identity = 130/231 (56.28%), Postives = 168/231 (72.73%), Query Frame = 0


Query: 33  DQDDHLPLIKRKRTRMKQLARRHKLFREKRLKRQLIHPVDDPI-PKSKEEPRGKDFVFDS 92
           + D+ L LIKRKR+  K+  +R KL +E+ LKR ++  +  P+   S E+P   D +FD+
Sbjct: 35  EDDERLSLIKRKRSPNKRTPKRLKLLKERSLKRPIVQSIASPVLEASAEQP---DIIFDT 94

Query: 93  ETEXXXXXDPNQETLIFRVLAEMVESEKDSLEIIPDEYKNLMIFMGGSWNFCPSLVMEKR 152
           ETE       +   L+     ++ E ++   + +  +YK+LMIFMG S N  PS +++KR
Sbjct: 95  ETESDSDVKDDLGDLLIGFKQDVYEFDRILADGLHQDYKSLMIFMGASSNSSPSFLLQKR 154

Query: 153 LKKGDVEERRNRLLIPQRKTRTNFLDVEEEEQLNRDVWWMVEIIEPDCTVSLITLSKWET 212
           LKKGDV+ERRNRL+IPQRK R NFLD+EEEE+LN + WWMVE+IEPDC+VSL+TLSKWET
Sbjct: 155 LKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWMVEVIEPDCSVSLMTLSKWET 214

Query: 213 WKGVAYVLITEWNGLVERNDLKEGDLMQLWSFRA-GGDRGRLCFMLLEVEE 262
             G AYV ITEWNGLVERN+LKEGDL+QLWSFR  GGD GRLCFMLLE+ E
Sbjct: 215 PSGAAYVFITEWNGLVERNELKEGDLIQLWSFRVHGGDHGRLCFMLLEICE 262

[Close]

BLAST of CsaV3_4G013340 vs. TAIR10
Match: AT1G05920.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 62.4 bits (150), Expect = 5.1e-10
Identity = 56/181 (30.94%), Postives = 89/181 (49.17%), Query Frame = 0


Query: 103 QETLIFRVLAEMVESEK-DSLEIIPDEYK-------NLMIFMGGSWNFCPSLVMEKRLKK 162
           ++ ++ R+L+ +   +K  S E +P ++         +M  M G+ +  P L++EK L  
Sbjct: 133 KDVILDRILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGD--PKLIIEKNLDS 192

Query: 163 GDVEERRNRLLIP-QRKTRTNFLDVEEEEQLNRDVWWMVEII-EPDCTVSLITL----SK 222
            DV+ R+NRL IP     + +FL ++E   ++ D     EI  E +  V+   +     K
Sbjct: 193 NDVDPRQNRLSIPINTVIQNDFLTLDESRLIDED-----EITNEGNMGVAAFLVDQRTKK 252

Query: 223 WE---------TWKGVAY---VLITEWNGLVERNDLKEGDLMQLWSFRAGGDRGRLCFML 258
           W          T  G +Y   VL  EW+ +VE N LKEGD + LWSFR+      LCF L
Sbjct: 253 WNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRS---NDILCFAL 303

[Close]

BLAST of CsaV3_4G013340 vs. TAIR10
Match: AT5G24050.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 146 LVMEKRLKKGDVEERRNRLLIP-QRKTRTNFLDVEEEEQLNRDVWWMVEI------IEPD 205
           L+ EK L   DV   +NRL +P     R +FL   E   +N D+    +I      ++  
Sbjct: 218 LIFEKTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIIINEDINNNNKIGVGAILVDQR 277

Query: 206 CTVSLITLSKWETWK-----GVAYVLITEWNGLVERNDLKEGDLMQLWSFRAGGDRGRLC 257
           C    + L +WE  K       +Y LI  WN +VE N LKEGD + LWSFR     G LC
Sbjct: 278 CKKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFRC---CGILC 337

[Close]

BLAST of CsaV3_4G013340 vs. TAIR10
Match: AT3G24850.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07
Identity = 39/123 (31.71%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 146 LVMEKRLKKGDVEERRNRLLIP-QRKTRTNFLD------VEEEEQLNRDVWWMVEIIEPD 205
           L+ EK L   D+   +NRL +P     + +FL       ++E+   N+ +     +++  
Sbjct: 228 LIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQR 287

Query: 206 CTVSLITLSKWETWKGVA-----YVLITEWNGLVERNDLKEGDLMQLWSFRAGGDRGRLC 257
                + L +WE  K        Y LI  WN +VE N LKEGD + +WSFR    RG LC
Sbjct: 288 SVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRC---RGVLC 347

[Close]

BLAST of CsaV3_4G013340 vs. TAIR10
Match: AT2G31420.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 52.4 bits (124), Expect = 5.2e-07
Identity = 41/143 (28.67%), Postives = 71/143 (49.65%), Query Frame = 0


Query: 125 IPDEYKNLMIFMGGSWNFCPSLVMEKR-LKKGDVEERRNRLLIPQRK-TRTNFLDVEEEE 184
           IPD    +M    G   + P L++++R L   D+ + +  L +   K  +++FL  +E  
Sbjct: 60  IPDWLVKVMRKENG---YDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETR 119

Query: 185 QLNRDV------WWMVEIIEPDCTVSLITLSKWE---TWKGVAYVLITEWNGLVERNDLK 244
            L+ D          V +++P+    ++ L KW     WK   YVL   WN ++++   K
Sbjct: 120 FLDEDFLKAKRDGLKVFLVDPESDKHVVYLKKWNGNTVWK---YVLSHGWNNVIDKKIFK 179

Query: 245 EGDLMQLWSFRAGGDRGRLCFML 257
             D++++WSFR G   G+LCF L
Sbjct: 180 VNDVIEIWSFRDGS--GKLCFAL 194

[Close]

BLAST of CsaV3_4G013340 vs. TAIR10
Match: AT5G38500.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05
Identity = 43/152 (28.29%), Postives = 62/152 (40.79%), Query Frame = 0


Query: 144 PSLVMEKRLKKGDVEERRNRLLIP-QRKTRTNFLDVEEEEQLNRDVWWMVEIIEPDCTVS 203
           P L+ E+ L K DV    +RLLIP Q+  R +FL  EE   +  D     +  + D +V 
Sbjct: 264 PKLIFERTLFKSDVNSNLSRLLIPFQKLIRNDFLTPEECRAMQED----KDKDDEDISVG 323

Query: 204 LI-----------------------TLSKWETW---------------KGVAYVLITEWN 257
            I                          +++ W                 + Y+L  +WN
Sbjct: 324 TILXXXXXXXXXXXXXXXXXXXXXXXXXRFKMWGLXXXXXXXEKDSGHGTLNYILNWDWN 383

[Close]

BLAST of CsaV3_4G013340 vs. Swiss-Prot
Match: sp|Q5RM09|Y1592_ARATH (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.1e-09
Identity = 56/181 (30.94%), Postives = 89/181 (49.17%), Query Frame = 0


Query: 103 QETLIFRVLAEMVESEK-DSLEIIPDEYK-------NLMIFMGGSWNFCPSLVMEKRLKK 162
           ++ ++ R+L+ +   +K  S E +P ++         +M  M G+ +  P L++EK L  
Sbjct: 133 KDVILDRILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGD--PKLIIEKNLDS 192

Query: 163 GDVEERRNRLLIP-QRKTRTNFLDVEEEEQLNRDVWWMVEII-EPDCTVSLITL----SK 222
            DV+ R+NRL IP     + +FL ++E   ++ D     EI  E +  V+   +     K
Sbjct: 193 NDVDPRQNRLSIPINTVIQNDFLTLDESRLIDED-----EITNEGNMGVAAFLVDQRTKK 252

Query: 223 WE---------TWKGVAY---VLITEWNGLVERNDLKEGDLMQLWSFRAGGDRGRLCFML 258
           W          T  G +Y   VL  EW+ +VE N LKEGD + LWSFR+      LCF L
Sbjct: 253 WNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRS---NDILCFAL 303

[Close]

BLAST of CsaV3_4G013340 vs. Swiss-Prot
Match: sp|Q9LSF7|Y3518_ARATH (B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25182 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-07
Identity = 43/123 (34.96%), Postives = 60/123 (48.78%), Query Frame = 0


Query: 146 LVMEKRLKKGDVEERRNRLLIP-QRKTRTNFLDVEEEEQLNRDVWWMVEI------IEPD 205
           L+ EK L   DV   +NRL +P     R +FL   E   +++D+    +I      ++  
Sbjct: 215 LIFEKTLFVTDVNPTQNRLSMPFNNLLRNDFLTSVESRIIDKDIKNDKKIGVGAILVDQR 274

Query: 206 CTVSLITLSKWETWKGVA-----YVLITEWNGLVERNDLKEGDLMQLWSFRAGGDRGRLC 257
           C    + L +WE  K        Y LI  WN +VE N LKEGD + LWSFR+    G LC
Sbjct: 275 CKKWGVMLKRWEMKKESGKGSWNYNLICGWNDIVEANGLKEGDNISLWSFRS---CGILC 334

[Close]

BLAST of CsaV3_4G013340 vs. Swiss-Prot
Match: sp|Q9FLV7|Y5405_ARATH (B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana OX=3702 GN=At5g24050 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.9e-07
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 146 LVMEKRLKKGDVEERRNRLLIP-QRKTRTNFLDVEEEEQLNRDVWWMVEI------IEPD 205
           L+ EK L   DV   +NRL +P     R +FL   E   +N D+    +I      ++  
Sbjct: 218 LIFEKTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIIINEDINNNNKIGVGAILVDQR 277

Query: 206 CTVSLITLSKWETWK-----GVAYVLITEWNGLVERNDLKEGDLMQLWSFRAGGDRGRLC 257
           C    + L +WE  K       +Y LI  WN +VE N LKEGD + LWSFR     G LC
Sbjct: 278 CKKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFRC---CGILC 337

[Close]

BLAST of CsaV3_4G013340 vs. Swiss-Prot
Match: sp|Q9LRX6|Y3485_ARATH (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.2e-06
Identity = 39/123 (31.71%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 146 LVMEKRLKKGDVEERRNRLLIP-QRKTRTNFLD------VEEEEQLNRDVWWMVEIIEPD 205
           L+ EK L   D+   +NRL +P     + +FL       ++E+   N+ +     +++  
Sbjct: 228 LIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQR 287

Query: 206 CTVSLITLSKWETWKGVA-----YVLITEWNGLVERNDLKEGDLMQLWSFRAGGDRGRLC 257
                + L +WE  K        Y LI  WN +VE N LKEGD + +WSFR    RG LC
Sbjct: 288 SVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRC---RGVLC 347

[Close]

BLAST of CsaV3_4G013340 vs. Swiss-Prot
Match: sp|Q9SIC7|Y2142_ARATH (B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana OX=3702 GN=At2g31420 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.4e-06
Identity = 41/143 (28.67%), Postives = 71/143 (49.65%), Query Frame = 0


Query: 125 IPDEYKNLMIFMGGSWNFCPSLVMEKR-LKKGDVEERRNRLLIPQRK-TRTNFLDVEEEE 184
           IPD    +M    G   + P L++++R L   D+ + +  L +   K  +++FL  +E  
Sbjct: 60  IPDWLVKVMRKENG---YDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETR 119

Query: 185 QLNRDV------WWMVEIIEPDCTVSLITLSKWE---TWKGVAYVLITEWNGLVERNDLK 244
            L+ D          V +++P+    ++ L KW     WK   YVL   WN ++++   K
Sbjct: 120 FLDEDFLKAKRDGLKVFLVDPESDKHVVYLKKWNGNTVWK---YVLSHGWNNVIDKKIFK 179

Query: 245 EGDLMQLWSFRAGGDRGRLCFML 257
             D++++WSFR G   G+LCF L
Sbjct: 180 VNDVIEIWSFRDGS--GKLCFAL 194

[Close]

BLAST of CsaV3_4G013340 vs. TrEMBL
Match: tr|A0A0A0L012|A0A0A0L012_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192190 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 3.7e-148
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MDSRPSTSTADPPKEQETTLSTNEEISDQNPSDQDDHLPLIKRKRTRMKQLARRHKLFRE 60
           MDSRPSTSTADPPKEQETTLSTNEEISDQNPSDQDDHLPLIKRKRTRMKQLARRHKLFRE
Sbjct: 1   MDSRPSTSTADPPKEQETTLSTNEEISDQNPSDQDDHLPLIKRKRTRMKQLARRHKLFRE 60

Query: 61  KRLKRQLIHPVDDPIPKSKEEPRGKDFVFDSETEXXXXXDPNQETLIFRVLAEMVESEKD 120
           KRLKRQLIHPVDDPIPKSKEEPRGKDFVFDSETEXXXXXDPNQETLIFRVLAEMVESEKD
Sbjct: 61  KRLKRQLIHPVDDPIPKSKEEPRGKDFVFDSETEXXXXXDPNQETLIFRVLAEMVESEKD 120

Query: 121 SLEIIPDEYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEE 180
           SLEIIPDEYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEE
Sbjct: 121 SLEIIPDEYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEE 180

Query: 181 EEQLNRDVWWMVEIIEPDCTVSLITLSKWETWKGVAYVLITEWNGLVERNDLKEGDLMQL 240
           EEQLNRDVWWMVEIIEPDCTVSLITLSKWETWKGVAYVLITEWNGLVERNDLKEGDLMQL
Sbjct: 181 EEQLNRDVWWMVEIIEPDCTVSLITLSKWETWKGVAYVLITEWNGLVERNDLKEGDLMQL 240

Query: 241 WSFRAGGDRGRLCFMLLEVEEIREDGGEIAAAES 275
           WSFRAGGDRGRLCFMLLEVEEIREDGGEIAAAES
Sbjct: 241 WSFRAGGDRGRLCFMLLEVEEIREDGGEIAAAES 274

[Close]

BLAST of CsaV3_4G013340 vs. TrEMBL
Match: tr|A0A1S3B4L2|A0A1S3B4L2_CUCME (B3 domain-containing protein At2g31420-like OS=Cucumis melo OX=3656 GN=LOC103485973 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 8.3e-108
Identity = 212/264 (80.30%), Postives = 228/264 (86.36%), Query Frame = 0


Query: 1   MDSRPSTSTADPPKEQETTLSTNEEISDQNPSDQDDHLPLIKRKRTRMKQLARRHKLFRE 60
           MDS  S+ +A+  +EQETT+STN EI+DQNPSD DDHLPLIKRKRTRMKQLARRHK  RE
Sbjct: 3   MDSNTSSPSANAQQEQETTVSTNGEITDQNPSDDDDHLPLIKRKRTRMKQLARRHKRDRE 62

Query: 61  KRLKRQLIHPVDDPIPKSKEEPRGKDFVFDSETEXXXXXDPNQETLIFRVLAEMVESEKD 120
           K LKR L HPV+DPIPKS EEP+GKD VFD+   XXXXX        F  LAE+VESE++
Sbjct: 63  KILKRPLKHPVNDPIPKSDEEPQGKDLVFDTXXXXXXXXXXXXXXXXFMALAEIVESERE 122

Query: 121 SLEIIPDEYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEE 180
            LE IP+EYK LMIFMGGSW+ CPSLVMEKRLKKGDVEERRNRLLIPQRKTRT FL+VEE
Sbjct: 123 FLENIPEEYKKLMIFMGGSWDVCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTTFLEVEE 182

Query: 181 EEQLNRDVWWMVEIIEPDCTVSLITLSKWETWKGVAYVLITEWNGLVERNDLKEGDLMQL 240
           EE+LN DVWWMVEIIEPDCTVSLITLSKWET KGVAYVLITEWNGLVERNDLKEGDLMQL
Sbjct: 183 EEKLNTDVWWMVEIIEPDCTVSLITLSKWETRKGVAYVLITEWNGLVERNDLKEGDLMQL 242

Query: 241 WSFRAGGDRGRLCFMLLEVEEIRE 265
           WSFRAGG RGRLCFMLLEVEE RE
Sbjct: 243 WSFRAGGGRGRLCFMLLEVEENRE 266

[Close]

BLAST of CsaV3_4G013340 vs. TrEMBL
Match: tr|A0A1U8F190|A0A1U8F190_CAPAN (putative B3 domain-containing protein At3g49610 OS=Capsicum annuum OX=4072 GN=LOC107849316 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 7.5e-16
Identity = 61/140 (43.57%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 128 EYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEEEEQLN-- 187
           ++K  +  MGGS      LV+EKRL   DV+    RLLIPQR+    FL+ EE+ +LN  
Sbjct: 135 DFKKKITEMGGSL-VSVKLVIEKRLFDTDVKRAEGRLLIPQRQMINVFLEPEEDSRLNTR 194

Query: 188 ---RDVWWMVEIIEPDCTVSLITLSKWETWKGVA-YVLITEWNGLVERNDLKEGDLMQLW 247
                    V +I+P   +S I L KW   KG   YVL+T WN +VE NDLK G  +QLW
Sbjct: 195 SGDNMCEMKVMLIQPSREISKINLRKWFMSKGNGNYVLVTYWNEVVETNDLKIGTKVQLW 254

Query: 248 SFRAGGDRGRLCFMLLEVEE 262
           +FR G D   LCF L++ E+
Sbjct: 255 AFRKGTD---LCFALVKHED 270

[Close]

BLAST of CsaV3_4G013340 vs. TrEMBL
Match: tr|A0A2G2Y6Z4|A0A2G2Y6Z4_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_29961 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 9.8e-16
Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 103 QETLIFRVLAEMVESEKDSLEIIPDEYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRN 162
           +  +I RV    V      L+I   ++K  +  MGGS      LV+EKRL   DV+    
Sbjct: 178 KRNIIVRVKVPPVGLINRELDI---DFKKKITEMGGSL-VSVKLVIEKRLFDTDVKRAEG 237

Query: 163 RLLIPQRKTRTNFLDVEEEEQLN-----RDVWWMVEIIEPDCTVSLITLSKWETWKGVA- 222
           RLLIPQR+    FL+ EE+ +LN           V +I+P   +S I L KW   KG   
Sbjct: 238 RLLIPQRQMINVFLEPEEDSRLNTRSGDNMCEMKVMLIQPSREISKINLRKWFMNKGNGN 297

Query: 223 YVLITEWNGLVERNDLKEGDLMQLWSFRAGGDRGRLCFMLLEVEE 262
           YVL+T WN +VE NDLK G  +QLW+FR G D   LCF L++ E+
Sbjct: 298 YVLVTYWNEVVETNDLKIGTKVQLWAFRKGTD---LCFALVKHED 335

[Close]

BLAST of CsaV3_4G013340 vs. TrEMBL
Match: tr|A0A2G2VFW5|A0A2G2VFW5_CAPBA (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_28211 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.4e-14
Identity = 63/153 (41.18%), Postives = 82/153 (53.59%), Query Frame = 0


Query: 103 QETLIFRVLAEMVESEKDSLEIIPDEYKNLMIFMGGSWNFCPSLVMEKRLKKGDVEERRN 162
           +  +I RV    V      L+I   ++K  +  MGGS      LV+EKRL   DV+    
Sbjct: 178 KRNIIVRVKVPPVGLINRELDI---DFKKKITEMGGSL-VSVKLVIEKRLFDTDVKRAEG 237

Query: 163 RLLIPQRKTRTNFLDVEEEEQLN-----RDVWWMVEIIEPDCTVSLITLSKWETWKGVA- 222
           RLLIPQR+    FL+ EE+ +LN           V +I+P   +S I L KW   KG   
Sbjct: 238 RLLIPQRQMINVFLEPEEDSRLNTRSGDNMCEMKVMLIQPSREISKINLRKWFMNKGNGN 297

Query: 223 YVLITEWNGLVERNDLKEGDLMQLWSFRAGGDR 250
           YVL+T WN +VE NDLK G  +QLW+FR GG R
Sbjct: 298 YVLVTYWNEVVETNDLKIGTKVQLWAFRKGGHR 326

The following BLAST results are available for this feature:

BLAST of CsaV3_4G013340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147556.1	5.6e-148	100.00	PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus] >KGN539...	[more]
XP_008441972.1	1.3e-107	80.30	PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo]	[more]
XP_023544949.1	2.2e-64	53.36	B3 domain-containing protein At2g31420-like [Cucurbita pepo subsp. pepo]	[more]
XP_022950597.1	4.2e-63	53.91	B3 domain-containing protein At2g31420-like [Cucurbita moschata]	[more]
XP_022978264.1	1.2e-62	56.28	uncharacterized protein LOC111478299 [Cucurbita maxima]	[more]

BLAST of CsaV3_4G013340 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05920.1	5.1e-10	30.94	Domain of unknown function (DUF313)	[more]
AT5G24050.1	1.6e-08	35.77	Domain of unknown function (DUF313)	[more]
AT3G24850.1	1.8e-07	31.71	Domain of unknown function (DUF313)	[more]
AT2G31420.1	5.2e-07	28.67	Domain of unknown function (DUF313)	[more]
AT5G38500.1	1.3e-05	28.29	Domain of unknown function (DUF313)	[more]

BLAST of CsaV3_4G013340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5RM09\|Y1592_ARATH	9.1e-09	30.94	B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05...	[more]
sp\|Q9LSF7\|Y3518_ARATH	2.2e-07	34.96	B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25...	[more]
sp\|Q9FLV7\|Y5405_ARATH	2.9e-07	35.77	B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana OX=3702 GN=At5g24...	[more]
sp\|Q9LRX6\|Y3485_ARATH	3.2e-06	31.71	Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9SIC7\|Y2142_ARATH	9.4e-06	28.67	B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana OX=3702 GN=At2g31...	[more]

BLAST of CsaV3_4G013340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L012\|A0A0A0L012_CUCSA	3.7e-148	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192190 PE=4 SV=1	[more]
tr\|A0A1S3B4L2\|A0A1S3B4L2_CUCME	8.3e-108	80.30	B3 domain-containing protein At2g31420-like OS=Cucumis melo OX=3656 GN=LOC103485...	[more]
tr\|A0A1U8F190\|A0A1U8F190_CAPAN	7.5e-16	43.57	putative B3 domain-containing protein At3g49610 OS=Capsicum annuum OX=4072 GN=LO...	[more]
tr\|A0A2G2Y6Z4\|A0A2G2Y6Z4_CAPAN	9.8e-16	40.61	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_29961 PE=4 SV=1	[more]
tr\|A0A2G2VFW5\|A0A2G2VFW5_CAPBA	1.4e-14	41.18	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_28211 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005508	DUF313
IPR015300	DNA-bd_pseudobarrel_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G013340.1	CsaV3_4G013340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	G3DSA:2.40.330.10		coord: 141..263 e-value: 1.1E-11 score: 46.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	SSF101936	DNA-binding pseudobarrel domain	coord: 148..246
IPR005508	Protein of unknown function DUF313	PFAM	PF03754	DUF313	coord: 143..228 e-value: 1.0E-7 score: 32.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..101
None	No IPR available	PANTHER	PTHR31541	FAMILY NOT NAMED	coord: 21..259

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G013340	CSPI04G11320	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G013340	Cucsa.024010	Cucumber (Gy14) v1	cgycucB530
CsaV3_4G013340	CmaCh03G002470	Cucurbita maxima (Rimu)	cmacucB0792
CsaV3_4G013340	CmoCh03G002610	Cucurbita moschata (Rifu)	cmocucB0774
CsaV3_4G013340	Cp4.1LG10g07010	Cucurbita pepo (Zucchini)	cpecucB0085
CsaV3_4G013340	CsGy4G010870	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G013340	Carg19560	Silver-seed gourd	carcucB0662
CsaV3_4G013340	Cla012139	Watermelon (97103) v1	cucwmB356
CsaV3_4G013340	MELO3C008795	Melon (DHL92) v3.5.1	cucmeB328
CsaV3_4G013340	ClCG04G005240	Watermelon (Charleston Gray)	cucwcgB320
CsaV3_4G013340	Lsi01G016600	Bottle gourd (USVL1VR-Ls)	cuclsiB280
CsaV3_4G013340	MELO3C008795.2	Melon (DHL92) v3.6.1	cucmedB321
CsaV3_4G013340	Bhi03G001828	Wax gourd	cucwgoB410

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G013340	Silver-seed gourd	carcucB0313
CsaV3_4G013340	Cucurbita maxima (Rimu)	cmacucB1017
CsaV3_4G013340	Cucurbita moschata (Rifu)	cmocucB1000
CsaV3_4G013340	Cucurbita pepo (Zucchini)	cpecucB0612
CsaV3_4G013340	Watermelon (97103) v2	cucwmbB309