CsaV3_4G012020 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G012020
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Intron maturase, type II family protein
Location	chr4 : 9323828 .. 9328675 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGAATGAAACTGGCCATAAACTTGGCCTCGCTTGTTGAAGAATCTCTTGATGTTGATCTGAGAAGATCAAAGACTCAAATGGAACTTAAGAGATCACTTGAAATTCGGATTAAGGAGAGGGTGAAGGCACAATATTTGAATGGGAAGTTTTTGGACTTGATGGGGAATGTAATTGCCTGCCCCAATACTCTTCAAAATGTTTACGACTGTATTAGAATTAACTCAAATGTTGACATTAAGTCGAATGATCGTTTGATCTCATTTGAATCTATGGCTGAAGAGCTTTCTAATGGTAATTTTGATGTCAATACCAATACTTTCTCCATATTAAGTTCAAGAAAAGAAGTACTAATTTTACCAAAGATAAAGTTGAAGGTTCTTCAGGAAGCCATTAGGATAGTTTTGGAGTGTGTGTTTAGGCCACATTTTTCCAAGATATCTCATGGTTGTCGAAGTGGAAGAGGACACTCAACAGCATTGAAGTACATCAAAAAAGAGATAAAAGATCCTGATTGGTGGTTCACAGTTGACTTAAGCAAAAAGATGGATGAGCTTGTGATGGCTAAACTCATTACAGTAATGGAGGACAAGATAGAGGACCCCAAATTATTTGCTGTTATCAGAAGTATATATTTGGCCGGGGCACTGAATTTGGAGTTTGGGGGTTTCCCAAAAGGTCACGGTCTTCCACAAGAGGGAGTTCTGTCTCCTATATTAACGAACATTTATCTAAACCTCTTTGACCAAGAATTTTTCAGATTATCTATGAAATACGAAGCTATTAATGAGTATGGTAATACTGGTCAAGATGGGTCACAATCAAGGCTACGGAGTTGGTTTAGGAGACAATTGAAAGGAAATAATTCTGATTATTCAGGTGAGGAGAAAGACAAGATAAGAGTATATTGTTGTCGCTATATGGATGAAATCTTTTTAGCAGTATCAGGTTCTAAAGATGTTGCTCATAGTTTTAGGTCTGAGATTTTTTATTTCGTGCAGAAGACTTTGCATTTGGACGTTAACCGTGAAGAGGAAATGGTATCATGTGAGACTCATGGAATTCGTTTTCTTGGTTGTTTGGTCAGACGAAGTGTGCAGGAAAGTCCTGCTGTAAAATCCATCCACAAGTTGAAGGAAAAAGTTGAGCTATTTGGTTTACAAAAGCAGGAGACTTGGAATGCTTGGACAGTGTGGTTGGGAAAGAAATGGCTTGCTCATGGTTTGAAGAAGGTTAAAGAGTCTGAGATTAAGCATTTAGCTAAAAATAGCTCTTTAAATAAAATTTCCAGTTTTCGTAAACCTGGAATGGAAACTGATCACTGGTACAAGGTTCTGTTGAAAATTTGGATGCAAGATCTAAATGCAAGAGCTGCAGAGAGTGAAGAAAAAATCTTATCTAAGCATGCAGTGGAACTTTCTCTTCCTTTTGAACTTCGAGATTCCTTTTATGAATTCCAAAGGCATGTCAAAGAATACATTTCTTCTGAGACAGCGTCTACTCTTGCCCTTTTACCAAATTATGACCCTTCTGCCAAACCTACTTTCATAACTGAGATTATAGCACCTGTCAATTCTATCAGAAAACGACTTTTGCGATATAGATTAGTCACAAATAAAGGACATCCATGCTCCTCTCCTTTCCTCATCTTACAAGATAACACCCAAATTATTGACTGGTTTGTAGGAGTATCTCGTCGTTTGTTTAGATGGTACAACAATTCTTCTAACTTCAGCGAGTTGTTCTTAATTTTCGATCAAGTTAGGAAATCTTGTATCCGAACGCTAGCAGCAAAGCACCGGATACACGAAAGTGAAATAGAAAAGAAGTTTGACTCAGAATTGAGTAAGATTTACTCCTCTTCTGAAATAGATCAAGAAAAAGAGAAGTCAACAGATACCCATGTTTTAGACCACGATGAGGCACTAAAGTATGGAATTTCATATAGTGGTTTGTGTTTGCTATCTTTTGCTAGAATGGTCAGCCAATCTCGTCCTTGCAATTGTTTCGTCATTGGGTGTTTGGCTCCTGCACCAAGTGTTTATACTCTTCATGTCATGGAGAGACAAAAGTTTCCGGGATGGAAGACTGGGTTCTCGAGTTCCATTCATCCTAGCTTGAACAAACGACGATTTGGGTTATGCAAACAACATTTGGCAGATTTGTATTTGGGTCGCATTTCTTTGCAATCTGTTGATTTTGGTGCATGGAAGTGAATTGTTTTTGTTCTGCTTATGATTTCATTTAACTTCTAAATTACTTGTTGAGATAAGATTTGCCAAGAGAAATGCCATGACTGAGCCTTCGTGATGCATAATTTGTGCTAGCATAATGATTTTCTGGTCTCAATGGTGTCTGAAATCCTAATTGGAATGTTGCGCCGATTGAACATTGTTAAAACTAATGTGAGGACCAGGCTGGAACAACCCAATGTGAGAATCAGGTTTGAACAACGTTCAGTTGAATGGGTGATGTTTATATCGATATCTTGGAAACCTTTTCAATTGCTCGGATGAAGAATATTAGTATGGTGAGGAGTACATGCCAATGGTCTATGCAAACTTCAACTACTATAGATCGTCAAGATTATGATATTGGCTTTGTGCCTAGCTTAACCCATGGTGGGTGGCTCTATGTGCACATAGGAGCGTGGATACGAAGGTTGCTACTGTGGCAATTTCTAAATATGCGTGAGCTCTGTCTAGCCGTGTGTTTCCCTTATGGATATGGATCACATGTGAGCTATTCTCGGTCGGTATTTAGTATTCTACCATGGTTGGTCGAATGAAGGTTGCTATTGTGGCAAGTACTAAATATGCGTGAGCTTAGTTTGGCCGCATGATTCCTTAATCATGTGCGAACTATTCTCGGTCGTATATTTAGGCACTTTGCTATAGTAGACTTTTATATGGTTCAGGTTTGTTGGCAAATACTTGTGGTTTATATTAATATGTGATTTTAACGTTTTAATTATTATTTCATTATCGATGCCATATTTAAACAGTTTTGAGAGCATGTTTTACGACTATTTACGTCTAAAAACTTGCCACTCACTAAGTTTTATCTAACATTTTCAATGCCCCCTCCCCTACCCCAGGTAGCAGTTAAGGACCAAGCATTCGTTGAGCTTCCTGTCATTTATTGTAGATTCTCATTCTTTTTGTATGTATGTACTTAAGTTTTGTATTGCATCATTGGGTGGTTAGAAGCAGCGAGAGTCATGTTATTATATTGTGTTTTGAGGGATTCTTGTTGGAATGTAATTATTTTGTAACTAATTCCTAGTTTGGATTGTAACTAATTCCTAGTTTGGATATGAACTCTGATTGAGACTCGGACTAGTTTTGATGAGTGTGTGGTGAGATACACTCGATGTGATTTTTTAGTATGAAGATTATATATATATTGAAAATTTCTTGAAAATTTCCTCCATTTTCAGGTTTGGCTAACCCATATTTTAAGGAAAATGTTGTCGGAATTTCTATAGAATTTAATAAAACTTGTTCACTTGGCTTTTAGGTTGAAAATTGTTATTTTCAAAAAGTGTTTTCATGCCATGTCTAAGTTAAAAGGGAAAACCTAAAACGGAGTGTGACCACTAGCGGATTTAATATAGGCCTAGACCCCTCAACTTTATCGTTAAGAAAACTATTAAATTTTTAATACATGTAGATAGTTTAGTGGTTACTTTGTTTGTCAGCCCTCTTTCAACCAGGTTTGAATCGTATCATGTAATTTATTTTTCTTTTTTCTTCAAATTACAACTTTTTTATTTTCACCTTCAACTTATTTTTTTTAAGTTTTTTAATTTTTTCAATTTTTTGTTGCTTATTCAATATCTAAGTTTTTATTTATTTATTTATTTGTATTTGTATTTTTTTTTTAAGTTTGTTATTTTATTTATATGCATTTGTTCTAATTTTTAGAATTATTTTAATTGAACTATAAAGTTCCTATTAATAAATTTTTTAGATCTGACACTGAATGTGATACCATGACAGTCAATGTGCATGTCTAGATGCACATCTCCATAAGCATATTCAGATGCCCATGATTGCATGGCACTAATGCTTAACACAACCTGTGTGCATAAGTGGCAGCCCAGGCATATGTGCACATAAGCACACGCCCAACTCAGATGGTTGCCTATGCTCCCACGCACATGGTGCATGTGTCCCACACAGGCCCATGGCATGTGTGTCGCCTTGTGCACAGACAGTGCTCTCATGTGCGCCCCAAACATAACATGGGCATTGTGTGTCACCTCGTGCATACACAGTGCTTTTCTTATGCATTGACACAAGTCTCAGATGCATGCGACACCTTAAGTGCATGCGTTTACACTAAACGCCCCTATAAGCATTCGCAAGTCTCTCAAAGGTTTCAGAAAGGCCCAAACATGCCATGATCGTGTTGTAGCTCATCCATGGCCTAGATATTCTCAAAAGGCTTTAGAAGGCTCGAGACAGTGCCAAAATGTGCTAGAAGCATCTTGACCACTCTGAGAAGGCATTGGAACGTGTTGGAGAATGCTAGGTAATGTTGGAACATTCCATAACGATACTTTTAATGACGGTTATGTATCTATGACGGTCTAGAAGTGTCATGAAAGGTCTATAATGTTCTAAGGCTTAATGTAAGGGCTAGAACTTATTGAGATGGCTATAGAAGAAGCCATAATCGACCTCAATGCCTTAAGGACGGTCACGTGAGTCTATAAATACCCTAAGGGGGCCTCATTTGTACTCAAGGAATTCAAATGATTGAGTTAATCAAAGCTCTCATTCTCTCAAGCTCACTCTTATTCACTCATCTCTAAATTCTTTTGCTGCAAAACTCATCCC

mRNA sequence

ATGGAGAGAATGAAACTGGCCATAAACTTGGCCTCGCTTGTTGAAGAATCTCTTGATGTTGATCTGAGAAGATCAAAGACTCAAATGGAACTTAAGAGATCACTTGAAATTCGGATTAAGGAGAGGGTGAAGGCACAATATTTGAATGGGAAGTTTTTGGACTTGATGGGGAATGTAATTGCCTGCCCCAATACTCTTCAAAATGTTTACGACTGTATTAGAATTAACTCAAATGTTGACATTAAGTCGAATGATCGTTTGATCTCATTTGAATCTATGGCTGAAGAGCTTTCTAATGGTAATTTTGATGTCAATACCAATACTTTCTCCATATTAAGTTCAAGAAAAGAAGTACTAATTTTACCAAAGATAAAGTTGAAGGTTCTTCAGGAAGCCATTAGGATAGTTTTGGAGTGTGTGTTTAGGCCACATTTTTCCAAGATATCTCATGGTTGTCGAAGTGGAAGAGGACACTCAACAGCATTGAAGTACATCAAAAAAGAGATAAAAGATCCTGATTGGTGGTTCACAGTTGACTTAAGCAAAAAGATGGATGAGCTTGTGATGGCTAAACTCATTACAGTAATGGAGGACAAGATAGAGGACCCCAAATTATTTGCTGTTATCAGAAGTATATATTTGGCCGGGGCACTGAATTTGGAGTTTGGGGGTTTCCCAAAAGGTCACGGTCTTCCACAAGAGGGAGTTCTGTCTCCTATATTAACGAACATTTATCTAAACCTCTTTGACCAAGAATTTTTCAGATTATCTATGAAATACGAAGCTATTAATGAGTATGGTAATACTGGTCAAGATGGGTCACAATCAAGGCTACGGAGTTGGTTTAGGAGACAATTGAAAGGAAATAATTCTGATTATTCAGGTGAGGAGAAAGACAAGATAAGAGTATATTGTTGTCGCTATATGGATGAAATCTTTTTAGCAGTATCAGGTTCTAAAGATGTTGCTCATAGTTTTAGGTCTGAGATTTTTTATTTCGTGCAGAAGACTTTGCATTTGGACGTTAACCGTGAAGAGGAAATGGTATCATGTGAGACTCATGGAATTCGTTTTCTTGGTTGTTTGGTCAGACGAAGTGTGCAGGAAAGTCCTGCTGTAAAATCCATCCACAAGTTGAAGGAAAAAGTTGAGCTATTTGGTTTACAAAAGCAGGAGACTTGGAATGCTTGGACAGTGTGGTTGGGAAAGAAATGGCTTGCTCATGGTTTGAAGAAGGTTAAAGAGTCTGAGATTAAGCATTTAGCTAAAAATAGCTCTTTAAATAAAATTTCCAGTTTTCGTAAACCTGGAATGGAAACTGATCACTGGTACAAGGTTCTGTTGAAAATTTGGATGCAAGATCTAAATGCAAGAGCTGCAGAGAGTGAAGAAAAAATCTTATCTAAGCATGCAGTGGAACTTTCTCTTCCTTTTGAACTTCGAGATTCCTTTTATGAATTCCAAAGGCATGTCAAAGAATACATTTCTTCTGAGACAGCGTCTACTCTTGCCCTTTTACCAAATTATGACCCTTCTGCCAAACCTACTTTCATAACTGAGATTATAGCACCTGTCAATTCTATCAGAAAACGACTTTTGCGATATAGATTAGTCACAAATAAAGGACATCCATGCTCCTCTCCTTTCCTCATCTTACAAGATAACACCCAAATTATTGACTGGTTTGTAGGAGTATCTCGTCGTTTGTTTAGATGGTACAACAATTCTTCTAACTTCAGCGAGTTGTTCTTAATTTTCGATCAAGTTAGGAAATCTTGTATCCGAACGCTAGCAGCAAAGCACCGGATACACGAAAGTGAAATAGAAAAGAAGTTTGACTCAGAATTGAGTAAGATTTACTCCTCTTCTGAAATAGATCAAGAAAAAGAGAAGTCAACAGATACCCATGTTTTAGACCACGATGAGGCACTAAAGTATGGAATTTCATATAGTGGTTTGTGTTTGCTATCTTTTGCTAGAATGGTCAGCCAATCTCGTCCTTGCAATTGTTTCGTCATTGGGTGTTTGGCTCCTGCACCAAGTGTTTATACTCTTCATGTCATGGAGAGACAAAAGTTTCCGGGATGGAAGACTGGGTTCTCGAGTTCCATTCATCCTAGCTTGAACAAACGACGATTTGGGTTATGCAAACAACATTTGGCAGATTTGTATTTGGGTCGCATTTCTTTGCAATCTGTTGATTTTGGTGCATGGAAGTGA

Coding sequence (CDS)

ATGGAGAGAATGAAACTGGCCATAAACTTGGCCTCGCTTGTTGAAGAATCTCTTGATGTTGATCTGAGAAGATCAAAGACTCAAATGGAACTTAAGAGATCACTTGAAATTCGGATTAAGGAGAGGGTGAAGGCACAATATTTGAATGGGAAGTTTTTGGACTTGATGGGGAATGTAATTGCCTGCCCCAATACTCTTCAAAATGTTTACGACTGTATTAGAATTAACTCAAATGTTGACATTAAGTCGAATGATCGTTTGATCTCATTTGAATCTATGGCTGAAGAGCTTTCTAATGGTAATTTTGATGTCAATACCAATACTTTCTCCATATTAAGTTCAAGAAAAGAAGTACTAATTTTACCAAAGATAAAGTTGAAGGTTCTTCAGGAAGCCATTAGGATAGTTTTGGAGTGTGTGTTTAGGCCACATTTTTCCAAGATATCTCATGGTTGTCGAAGTGGAAGAGGACACTCAACAGCATTGAAGTACATCAAAAAAGAGATAAAAGATCCTGATTGGTGGTTCACAGTTGACTTAAGCAAAAAGATGGATGAGCTTGTGATGGCTAAACTCATTACAGTAATGGAGGACAAGATAGAGGACCCCAAATTATTTGCTGTTATCAGAAGTATATATTTGGCCGGGGCACTGAATTTGGAGTTTGGGGGTTTCCCAAAAGGTCACGGTCTTCCACAAGAGGGAGTTCTGTCTCCTATATTAACGAACATTTATCTAAACCTCTTTGACCAAGAATTTTTCAGATTATCTATGAAATACGAAGCTATTAATGAGTATGGTAATACTGGTCAAGATGGGTCACAATCAAGGCTACGGAGTTGGTTTAGGAGACAATTGAAAGGAAATAATTCTGATTATTCAGGTGAGGAGAAAGACAAGATAAGAGTATATTGTTGTCGCTATATGGATGAAATCTTTTTAGCAGTATCAGGTTCTAAAGATGTTGCTCATAGTTTTAGGTCTGAGATTTTTTATTTCGTGCAGAAGACTTTGCATTTGGACGTTAACCGTGAAGAGGAAATGGTATCATGTGAGACTCATGGAATTCGTTTTCTTGGTTGTTTGGTCAGACGAAGTGTGCAGGAAAGTCCTGCTGTAAAATCCATCCACAAGTTGAAGGAAAAAGTTGAGCTATTTGGTTTACAAAAGCAGGAGACTTGGAATGCTTGGACAGTGTGGTTGGGAAAGAAATGGCTTGCTCATGGTTTGAAGAAGGTTAAAGAGTCTGAGATTAAGCATTTAGCTAAAAATAGCTCTTTAAATAAAATTTCCAGTTTTCGTAAACCTGGAATGGAAACTGATCACTGGTACAAGGTTCTGTTGAAAATTTGGATGCAAGATCTAAATGCAAGAGCTGCAGAGAGTGAAGAAAAAATCTTATCTAAGCATGCAGTGGAACTTTCTCTTCCTTTTGAACTTCGAGATTCCTTTTATGAATTCCAAAGGCATGTCAAAGAATACATTTCTTCTGAGACAGCGTCTACTCTTGCCCTTTTACCAAATTATGACCCTTCTGCCAAACCTACTTTCATAACTGAGATTATAGCACCTGTCAATTCTATCAGAAAACGACTTTTGCGATATAGATTAGTCACAAATAAAGGACATCCATGCTCCTCTCCTTTCCTCATCTTACAAGATAACACCCAAATTATTGACTGGTTTGTAGGAGTATCTCGTCGTTTGTTTAGATGGTACAACAATTCTTCTAACTTCAGCGAGTTGTTCTTAATTTTCGATCAAGTTAGGAAATCTTGTATCCGAACGCTAGCAGCAAAGCACCGGATACACGAAAGTGAAATAGAAAAGAAGTTTGACTCAGAATTGAGTAAGATTTACTCCTCTTCTGAAATAGATCAAGAAAAAGAGAAGTCAACAGATACCCATGTTTTAGACCACGATGAGGCACTAAAGTATGGAATTTCATATAGTGGTTTGTGTTTGCTATCTTTTGCTAGAATGGTCAGCCAATCTCGTCCTTGCAATTGTTTCGTCATTGGGTGTTTGGCTCCTGCACCAAGTGTTTATACTCTTCATGTCATGGAGAGACAAAAGTTTCCGGGATGGAAGACTGGGTTCTCGAGTTCCATTCATCCTAGCTTGAACAAACGACGATTTGGGTTATGCAAACAACATTTGGCAGATTTGTATTTGGGTCGCATTTCTTTGCAATCTGTTGATTTTGGTGCATGGAAGTGA

Protein sequence

MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDKIRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLGCLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKHLAKNSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPFELRDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLVTNKGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLAAKHRIHESEIEKKFDSELSKIYSSSEIDQEKEKSTDTHVLDHDEALKYGISYSGLCLLSFARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHLADLYLGRISLQSVDFGAWK

Homology

[Close]

BLAST of CsaV3_4G012020 vs. NCBI nr
Match: XP_011653460.1 (PREDICTED: uncharacterized protein LOC101219510 [Cucumis sativus] >KGN53910.1 hypothetical protein Csa_4G188380 [Cucumis sativus])

HSP 1 Score: 1480.7 bits (3832), Expect = 0.0e+00
Identity = 739/739 (100.00%), Postives = 739/739 (100.00%), Query Frame = 0


Query: 1   MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI 60
           MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI
Sbjct: 61  MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI 120

Query: 61  ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLI 120
           ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLI
Sbjct: 121 ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLI 180

Query: 121 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 180
           LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL
Sbjct: 181 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 240

Query: 181 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI 240
           SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI
Sbjct: 241 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI 300

Query: 241 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK 300
           LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK
Sbjct: 301 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK 360

Query: 301 IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLG 360
           IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLG
Sbjct: 361 IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLG 420

Query: 361 CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKH 420
           CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKH
Sbjct: 421 CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKH 480

Query: 421 LAKNSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPFEL 480
           LAKNSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPFEL
Sbjct: 481 LAKNSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPFEL 540

Query: 481 RDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLVTN 540
           RDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLVTN
Sbjct: 541 RDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLVTN 600

Query: 541 KGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLAAK 600
           KGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLAAK
Sbjct: 601 KGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLAAK 660

Query: 601 HRIHESEIEKKFDSELSKIYSSSEIDQEKEKSTDTHVLDHDEALKYGISYSGLCLLSFAR 660
           HRIHESEIEKKFDSELSKIYSSSEIDQEKEKSTDTHVLDHDEALKYGISYSGLCLLSFAR
Sbjct: 661 HRIHESEIEKKFDSELSKIYSSSEIDQEKEKSTDTHVLDHDEALKYGISYSGLCLLSFAR 720

Query: 661 MVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL 720
           MVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL
Sbjct: 721 MVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL 780

Query: 721 ADLYLGRISLQSVDFGAWK 740
           ADLYLGRISLQSVDFGAWK
Sbjct: 781 ADLYLGRISLQSVDFGAWK 799

[Close]

BLAST of CsaV3_4G012020 vs. NCBI nr
Match: XP_008442019.1 (PREDICTED: uncharacterized protein LOC103486008 [Cucumis melo])

HSP 1 Score: 1411.4 bits (3652), Expect = 0.0e+00
Identity = 703/739 (95.13%), Postives = 721/739 (97.56%), Query Frame = 0


Query: 1   MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI 60
           ME+MKLA+NLASLVEESLDVDLRRSKT+MELKRSLEI+IKERVKAQYLNGKFLDLMGNVI
Sbjct: 63  MEKMKLAMNLASLVEESLDVDLRRSKTRMELKRSLEIQIKERVKAQYLNGKFLDLMGNVI 122

Query: 61  ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLI 120
           ACPNTLQN YDCIRINSNVDIKSND LISFESMA+ELS+GNFDVNTNTFSILSSRKEVLI
Sbjct: 123 ACPNTLQNAYDCIRINSNVDIKSNDCLISFESMAKELSHGNFDVNTNTFSILSSRKEVLI 182

Query: 121 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 180
           LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL
Sbjct: 183 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 242

Query: 181 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI 240
           SKKMDELVMAKLITVMEDKIEDPKLFAVIRSI+LAGALNLEFG FPKGHGLPQEGVLSPI
Sbjct: 243 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIHLAGALNLEFGSFPKGHGLPQEGVLSPI 302

Query: 241 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK 300
           LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQS+LRSWFRRQLK N+SDY GEEKDK
Sbjct: 303 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSKLRSWFRRQLKENSSDYPGEEKDK 362

Query: 301 IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLG 360
           IRVYCCRYMDEIFLAVSGSKDVA SFRSEIF F+QKTLHLDVN EEEMVSCETHGIRFLG
Sbjct: 363 IRVYCCRYMDEIFLAVSGSKDVALSFRSEIFDFMQKTLHLDVNHEEEMVSCETHGIRFLG 422

Query: 361 CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKH 420
           CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETW +WTVWLGKKWLAHGLKKVKESEIKH
Sbjct: 423 CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWKSWTVWLGKKWLAHGLKKVKESEIKH 482

Query: 421 LAKNSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPFEL 480
           LAKNSSLN+ISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVE SLPFEL
Sbjct: 483 LAKNSSLNQISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVEPSLPFEL 542

Query: 481 RDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLVTN 540
           RDSFYEFQR V+EYISSETASTLALLPNYDPS KPTFITEIIAPVNSIRKRL RYRLVTN
Sbjct: 543 RDSFYEFQRRVEEYISSETASTLALLPNYDPSVKPTFITEIIAPVNSIRKRLFRYRLVTN 602

Query: 541 KGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLAAK 600
           KGHPCSSPFLILQDNTQIIDWF+GVSRR FRWYN SSNFSELFLIFDQVRKSCIRTLAAK
Sbjct: 603 KGHPCSSPFLILQDNTQIIDWFLGVSRRWFRWYNKSSNFSELFLIFDQVRKSCIRTLAAK 662

Query: 601 HRIHESEIEKKFDSELSKIYSSSEIDQEKEKSTDTHVLDHDEALKYGISYSGLCLLSFAR 660
           H+IHESEIEKKFDSELSKIYSS EI+QEKEKSTDTHVLDHDEAL YGISYSGLCLLS AR
Sbjct: 663 HQIHESEIEKKFDSELSKIYSSPEIEQEKEKSTDTHVLDHDEALNYGISYSGLCLLSLAR 722

Query: 661 MVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL 720
           MVS+SRPCNCFV+GCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL
Sbjct: 723 MVSRSRPCNCFVVGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL 782

Query: 721 ADLYLGRISLQSVDFGAWK 740
           ADLYLGRISLQSVDFGAWK
Sbjct: 783 ADLYLGRISLQSVDFGAWK 801

[Close]

BLAST of CsaV3_4G012020 vs. NCBI nr
Match: XP_022146069.1 (nuclear intron maturase 4, mitochondrial isoform X3 [Momordica charantia])

HSP 1 Score: 1251.5 bits (3237), Expect = 0.0e+00
Identity = 623/742 (83.96%), Postives = 679/742 (91.51%), Query Frame = 0


Query: 1   MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI 60
           ME+ KLA NLASLVEESLDVD RR K++MELKRSLEI+IK+RVKAQY+NGKF+DLMG VI
Sbjct: 61  MEKKKLAENLASLVEESLDVDSRRPKSRMELKRSLEIQIKKRVKAQYVNGKFMDLMGKVI 120

Query: 61  ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLI 120
           ACP TLQN YDC+RINSNVDI SND LISFESMAEEL NG+FDVN NTFSI SS+KEVLI
Sbjct: 121 ACPPTLQNAYDCVRINSNVDIASNDHLISFESMAEELHNGSFDVNANTFSISSSKKEVLI 180

Query: 121 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 180
           LPK+KLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYI+KEI +PDWWFTVD+
Sbjct: 181 LPKLKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIRKEINNPDWWFTVDI 240

Query: 181 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI 240
           SKKMDEL MAKLI+VMEDKIEDP+ FA+IRSI+ AGALNLEFGGFPKGHGLPQEGVLSPI
Sbjct: 241 SKKMDELEMAKLISVMEDKIEDPEFFAIIRSIFEAGALNLEFGGFPKGHGLPQEGVLSPI 300

Query: 241 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK 300
           L NIYLNLFDQEFFRLSMKYEAIN+YGN  QDGSQS+LRSWFRR+LKGN+S+Y  +EKD 
Sbjct: 301 LMNIYLNLFDQEFFRLSMKYEAINKYGNAVQDGSQSKLRSWFRRKLKGNDSEYPAQEKDN 360

Query: 301 IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSC-ETHGIRFL 360
           IRVYCCRYMDEIF+AVSGSKDVA SFRSEI  F+QK+LHLDVN +EEMVSC ET GIRFL
Sbjct: 361 IRVYCCRYMDEIFMAVSGSKDVALSFRSEIQDFIQKSLHLDVNHQEEMVSCRETRGIRFL 420

Query: 361 GCLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIK 420
           GCLVRRS +ESPAVK++HKLKEKVELF LQKQE WN WTVWLGKKWLAHGLKKVKESEIK
Sbjct: 421 GCLVRRSEKESPAVKAVHKLKEKVELFALQKQEAWNDWTVWLGKKWLAHGLKKVKESEIK 480

Query: 421 HLAKNS-SLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPF 480
           HLAKNS SLN+ISSFRK GMETDHWYKVLLKIWMQD+NA+AAE+EE ILS + VE SLP 
Sbjct: 481 HLAKNSPSLNQISSFRKVGMETDHWYKVLLKIWMQDINAKAAETEETILSNYVVEPSLPL 540

Query: 481 ELRDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLV 540
           ELRDSFYEFQR V+EY+SSETAST+ALLPNYDPS K TFITEIIAPVNSIRKRLLRYRL+
Sbjct: 541 ELRDSFYEFQRRVEEYVSSETASTVALLPNYDPSVKSTFITEIIAPVNSIRKRLLRYRLI 600

Query: 541 TNKGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLA 600
           TNKG+PC+SPFLIL DNTQIIDWF+GV RR  +WY+N SNFSE+ LI DQVRKSCIRTLA
Sbjct: 601 TNKGYPCASPFLILHDNTQIIDWFLGVYRRWLKWYSNCSNFSEVILICDQVRKSCIRTLA 660

Query: 601 AKHRIHESEIEKKFDSELSKIYSSSEIDQ-EKEKSTDTHVLDHDEALKYGISYSGLCLLS 660
           AKHR HESEIEKKFD ELS+I S+ EI+Q E+E+++DTH L HDEA  YGISYSGLCLLS
Sbjct: 661 AKHRTHESEIEKKFDLELSRICSTPEIEQEEEEEASDTHGLGHDEASTYGISYSGLCLLS 720

Query: 661 FARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCK 720
            ARMVSQSRPCNCFV+GCLA APSVYTLHVMERQKFPGWKTGFSSSIHPSLN+RR GLCK
Sbjct: 721 LARMVSQSRPCNCFVMGCLASAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNRRRVGLCK 780

Query: 721 QHLADLYLGRISLQSVDFGAWK 740
           QHL DLYLG ISLQSV+FGAWK
Sbjct: 781 QHLKDLYLGHISLQSVNFGAWK 802

[Close]

BLAST of CsaV3_4G012020 vs. NCBI nr
Match: XP_022146067.1 (nuclear intron maturase 4, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 1251.5 bits (3237), Expect = 0.0e+00
Identity = 623/742 (83.96%), Postives = 679/742 (91.51%), Query Frame = 0


Query: 1   MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI 60
           ME+ KLA NLASLVEESLDVD RR K++MELKRSLEI+IK+RVKAQY+NGKF+DLMG VI
Sbjct: 69  MEKKKLAENLASLVEESLDVDSRRPKSRMELKRSLEIQIKKRVKAQYVNGKFMDLMGKVI 128

Query: 61  ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLI 120
           ACP TLQN YDC+RINSNVDI SND LISFESMAEEL NG+FDVN NTFSI SS+KEVLI
Sbjct: 129 ACPPTLQNAYDCVRINSNVDIASNDHLISFESMAEELHNGSFDVNANTFSISSSKKEVLI 188

Query: 121 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 180
           LPK+KLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYI+KEI +PDWWFTVD+
Sbjct: 189 LPKLKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIRKEINNPDWWFTVDI 248

Query: 181 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI 240
           SKKMDEL MAKLI+VMEDKIEDP+ FA+IRSI+ AGALNLEFGGFPKGHGLPQEGVLSPI
Sbjct: 249 SKKMDELEMAKLISVMEDKIEDPEFFAIIRSIFEAGALNLEFGGFPKGHGLPQEGVLSPI 308

Query: 241 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK 300
           L NIYLNLFDQEFFRLSMKYEAIN+YGN  QDGSQS+LRSWFRR+LKGN+S+Y  +EKD 
Sbjct: 309 LMNIYLNLFDQEFFRLSMKYEAINKYGNAVQDGSQSKLRSWFRRKLKGNDSEYPAQEKDN 368

Query: 301 IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSC-ETHGIRFL 360
           IRVYCCRYMDEIF+AVSGSKDVA SFRSEI  F+QK+LHLDVN +EEMVSC ET GIRFL
Sbjct: 369 IRVYCCRYMDEIFMAVSGSKDVALSFRSEIQDFIQKSLHLDVNHQEEMVSCRETRGIRFL 428

Query: 361 GCLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIK 420
           GCLVRRS +ESPAVK++HKLKEKVELF LQKQE WN WTVWLGKKWLAHGLKKVKESEIK
Sbjct: 429 GCLVRRSEKESPAVKAVHKLKEKVELFALQKQEAWNDWTVWLGKKWLAHGLKKVKESEIK 488

Query: 421 HLAKNS-SLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPF 480
           HLAKNS SLN+ISSFRK GMETDHWYKVLLKIWMQD+NA+AAE+EE ILS + VE SLP 
Sbjct: 489 HLAKNSPSLNQISSFRKVGMETDHWYKVLLKIWMQDINAKAAETEETILSNYVVEPSLPL 548

Query: 481 ELRDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLV 540
           ELRDSFYEFQR V+EY+SSETAST+ALLPNYDPS K TFITEIIAPVNSIRKRLLRYRL+
Sbjct: 549 ELRDSFYEFQRRVEEYVSSETASTVALLPNYDPSVKSTFITEIIAPVNSIRKRLLRYRLI 608

Query: 541 TNKGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLA 600
           TNKG+PC+SPFLIL DNTQIIDWF+GV RR  +WY+N SNFSE+ LI DQVRKSCIRTLA
Sbjct: 609 TNKGYPCASPFLILHDNTQIIDWFLGVYRRWLKWYSNCSNFSEVILICDQVRKSCIRTLA 668

Query: 601 AKHRIHESEIEKKFDSELSKIYSSSEIDQ-EKEKSTDTHVLDHDEALKYGISYSGLCLLS 660
           AKHR HESEIEKKFD ELS+I S+ EI+Q E+E+++DTH L HDEA  YGISYSGLCLLS
Sbjct: 669 AKHRTHESEIEKKFDLELSRICSTPEIEQEEEEEASDTHGLGHDEASTYGISYSGLCLLS 728

Query: 661 FARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCK 720
            ARMVSQSRPCNCFV+GCLA APSVYTLHVMERQKFPGWKTGFSSSIHPSLN+RR GLCK
Sbjct: 729 LARMVSQSRPCNCFVMGCLASAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNRRRVGLCK 788

Query: 721 QHLADLYLGRISLQSVDFGAWK 740
           QHL DLYLG ISLQSV+FGAWK
Sbjct: 789 QHLKDLYLGHISLQSVNFGAWK 810

[Close]

BLAST of CsaV3_4G012020 vs. NCBI nr
Match: XP_022146068.1 (nuclear intron maturase 4, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 1251.5 bits (3237), Expect = 0.0e+00
Identity = 623/742 (83.96%), Postives = 679/742 (91.51%), Query Frame = 0


Query: 1   MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI 60
           ME+ KLA NLASLVEESLDVD RR K++MELKRSLEI+IK+RVKAQY+NGKF+DLMG VI
Sbjct: 68  MEKKKLAENLASLVEESLDVDSRRPKSRMELKRSLEIQIKKRVKAQYVNGKFMDLMGKVI 127

Query: 61  ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLI 120
           ACP TLQN YDC+RINSNVDI SND LISFESMAEEL NG+FDVN NTFSI SS+KEVLI
Sbjct: 128 ACPPTLQNAYDCVRINSNVDIASNDHLISFESMAEELHNGSFDVNANTFSISSSKKEVLI 187

Query: 121 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 180
           LPK+KLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYI+KEI +PDWWFTVD+
Sbjct: 188 LPKLKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIRKEINNPDWWFTVDI 247

Query: 181 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI 240
           SKKMDEL MAKLI+VMEDKIEDP+ FA+IRSI+ AGALNLEFGGFPKGHGLPQEGVLSPI
Sbjct: 248 SKKMDELEMAKLISVMEDKIEDPEFFAIIRSIFEAGALNLEFGGFPKGHGLPQEGVLSPI 307

Query: 241 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK 300
           L NIYLNLFDQEFFRLSMKYEAIN+YGN  QDGSQS+LRSWFRR+LKGN+S+Y  +EKD 
Sbjct: 308 LMNIYLNLFDQEFFRLSMKYEAINKYGNAVQDGSQSKLRSWFRRKLKGNDSEYPAQEKDN 367

Query: 301 IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSC-ETHGIRFL 360
           IRVYCCRYMDEIF+AVSGSKDVA SFRSEI  F+QK+LHLDVN +EEMVSC ET GIRFL
Sbjct: 368 IRVYCCRYMDEIFMAVSGSKDVALSFRSEIQDFIQKSLHLDVNHQEEMVSCRETRGIRFL 427

Query: 361 GCLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIK 420
           GCLVRRS +ESPAVK++HKLKEKVELF LQKQE WN WTVWLGKKWLAHGLKKVKESEIK
Sbjct: 428 GCLVRRSEKESPAVKAVHKLKEKVELFALQKQEAWNDWTVWLGKKWLAHGLKKVKESEIK 487

Query: 421 HLAKNS-SLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPF 480
           HLAKNS SLN+ISSFRK GMETDHWYKVLLKIWMQD+NA+AAE+EE ILS + VE SLP 
Sbjct: 488 HLAKNSPSLNQISSFRKVGMETDHWYKVLLKIWMQDINAKAAETEETILSNYVVEPSLPL 547

Query: 481 ELRDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLV 540
           ELRDSFYEFQR V+EY+SSETAST+ALLPNYDPS K TFITEIIAPVNSIRKRLLRYRL+
Sbjct: 548 ELRDSFYEFQRRVEEYVSSETASTVALLPNYDPSVKSTFITEIIAPVNSIRKRLLRYRLI 607

Query: 541 TNKGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLA 600
           TNKG+PC+SPFLIL DNTQIIDWF+GV RR  +WY+N SNFSE+ LI DQVRKSCIRTLA
Sbjct: 608 TNKGYPCASPFLILHDNTQIIDWFLGVYRRWLKWYSNCSNFSEVILICDQVRKSCIRTLA 667

Query: 601 AKHRIHESEIEKKFDSELSKIYSSSEIDQ-EKEKSTDTHVLDHDEALKYGISYSGLCLLS 660
           AKHR HESEIEKKFD ELS+I S+ EI+Q E+E+++DTH L HDEA  YGISYSGLCLLS
Sbjct: 668 AKHRTHESEIEKKFDLELSRICSTPEIEQEEEEEASDTHGLGHDEASTYGISYSGLCLLS 727

Query: 661 FARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCK 720
            ARMVSQSRPCNCFV+GCLA APSVYTLHVMERQKFPGWKTGFSSSIHPSLN+RR GLCK
Sbjct: 728 LARMVSQSRPCNCFVMGCLASAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNRRRVGLCK 787

Query: 721 QHLADLYLGRISLQSVDFGAWK 740
           QHL DLYLG ISLQSV+FGAWK
Sbjct: 788 QHLKDLYLGHISLQSVNFGAWK 809

[Close]

BLAST of CsaV3_4G012020 vs. TAIR10
Match: AT1G74350.1 (Intron maturase, type II family protein)

HSP 1 Score: 843.2 bits (2177), Expect = 1.2e-244
Identity = 439/743 (59.08%), Postives = 548/743 (73.76%), Query Frame = 0


Query: 6   LAINLASLVEESLD--VDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACP 65
           LA  LASLVEES     D  + +++MELKRSLE+R+K+RVK Q +NGKF DL+  VIA P
Sbjct: 11  LAGELASLVEESSSHVDDDSKPRSRMELKRSLELRLKKRVKEQCINGKFSDLLKKVIARP 70

Query: 66  NTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILS--SRKEVLIL 125
            TL++ YDCIR+NSNV I   +  ++F+S+AEELS+G FDV +NTFSI++    KEVL+L
Sbjct: 71  ETLRDAYDCIRLNSNVSITERNGSVAFDSIAEELSSGVFDVASNTFSIVARDKTKEVLVL 130

Query: 126 PKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLS 185
           P + LKV+QEAIRIVLE VF PHFSKISH CRSGRG ++ALKYI   I   DW FT+ L+
Sbjct: 131 PSVALKVVQEAIRIVLEVVFSPHFSKISHSCRSGRGRASALKYINNNISRSDWCFTLSLN 190

Query: 186 KKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPIL 245
           KK+D  V   L++VME+K+ED  L  ++RS++ A  LNLEFGGFPKGHGLPQEGVLS +L
Sbjct: 191 KKLDVSVFENLLSVMEEKVEDSSLSILLRSMFEARVLNLEFGGFPKGHGLPQEGVLSRVL 250

Query: 246 TNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDKI 305
            NIYL+ FD EF+R+SM++EA+     T +D   S+LRSWFRRQ        + E+   +
Sbjct: 251 MNIYLDRFDHEFYRISMRHEALGLDSKTDEDSPGSKLRSWFRRQAGEQGLKSTTEQDVAL 310

Query: 306 RVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCE-THGIRFLG 365
           RVYCCR+MDEI+ +VSG K VA   RSE   F++ +LHLD+  E +   CE T G+R LG
Sbjct: 311 RVYCCRFMDEIYFSVSGPKKVASDIRSEAIGFLRNSLHLDITDETDPSPCEATSGLRVLG 370

Query: 366 CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKH 425
            LVR++V+ESP VK++HKLKEKV LF LQK+E W   TV +GKKWL HGLKKVKESEIK 
Sbjct: 371 TLVRKNVRESPTVKAVHKLKEKVRLFALQKEEAWTLGTVRIGKKWLGHGLKKVKESEIKG 430

Query: 426 LA-KNSSLNKISSFRKPGMETDHWYKVLLKIWMQD-LNARAAESEEKILSKHAVELSLPF 485
           LA  NS+L++IS  RK GMETDHWYK+LL+IWM+D L   A  SEE +LSKH VE ++P 
Sbjct: 431 LADSNSTLSQISCHRKAGMETDHWYKILLRIWMEDVLRTSADRSEEFVLSKHVVEPTVPQ 490

Query: 486 ELRDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLV 545
           ELRD+FY+FQ     Y+SSETA+  ALLP      +P F  +++AP N+I +RL RY L+
Sbjct: 491 ELRDAFYKFQNAAAAYVSSETANLEALLPCPQSHDRPVFFGDVVAPTNAIGRRLYRYGLI 550

Query: 546 TNKGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSEL-FLIFDQVRKSCIRTL 605
           T KG+  S+  LIL D  QIIDW+ G+ RR   WY   SNF E+  LI +Q+R SCIRTL
Sbjct: 551 TAKGYARSNSMLILLDTAQIIDWYSGLVRRWVIWYEGCSNFDEIKALIDNQIRMSCIRTL 610

Query: 606 AAKHRIHESEIEKKFDSELSKIYSSSEIDQE-KEKSTDTHVLDHDEALKYGISYSGLCLL 665
           AAK+RIHE+EIEK+ D ELS I S+ +I+QE + +  D+   D DE L YG+S SGLCLL
Sbjct: 611 AAKYRIHENEIEKRLDLELSTIPSAEDIEQEIQHEKLDSPAFDRDEHLTYGLSNSGLCLL 670

Query: 666 SFARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLC 725
           S AR+VS+SRPCNCFVIGC   AP+VYTLH MERQKFPGWKTGFS  I  SLN RR GLC
Sbjct: 671 SLARLVSESRPCNCFVIGCSMAAPAVYTLHAMERQKFPGWKTGFSVCIPSSLNGRRIGLC 730

Query: 726 KQHLADLYLGRISLQSVDFGAWK 740
           KQHL DLY+G+ISLQ+VDFGAW+
Sbjct: 731 KQHLKDLYIGQISLQAVDFGAWR 753

[Close]

BLAST of CsaV3_4G012020 vs. TAIR10
Match: AT5G04050.2 (RNA-directed DNA polymerase (reverse transcriptase))

HSP 1 Score: 177.9 bits (450), Expect = 2.2e-44
Identity = 181/750 (24.13%), Postives = 309/750 (41.20%), Query Frame = 0


Query: 17  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTL----QNVYDC 76
           SL ++  ++ T+  +K  LE  + +    QY +GKF  L+ N ++ P  L    QN+   
Sbjct: 31  SLFLNSDQTITEPLVKSELEALVLK----QYSHGKFYSLVKNAVSLPCVLLAACQNL--S 90

Query: 77  IRINSNVDIKSN-DRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQE 136
           +  NS+ D+     R  S E M  E+  G FD+ +     +SS    L+LP +KLKVL E
Sbjct: 91  LSANSSGDLADRVSRRFSIEEMGREIREGRFDIRSCCVEFISSS---LVLPNLKLKVLIE 150

Query: 137 AIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKM-DELVMA 196
           AIR+VLE V+   F+  S+G R G G  TA++Y+K  +++P WWF V  +++M +E  + 
Sbjct: 151 AIRMVLEIVYDDRFATFSYGGRVGMGRHTAIRYLKNSVENPRWWFRVSFAREMFEERNVD 210

Query: 197 KLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFD 256
            L   + +KI D  L  +I+ ++  G L +E GG   G G PQE  L  IL N+Y +  D
Sbjct: 211 ILCGFVGEKINDVMLIEMIKKLFEFGILKIELGGCNSGRGFPQECGLCSILINVYFDGLD 270

Query: 257 QEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDKIRVYCCRYMD 316
           +E   L +K +  N    TG + S   +  +F+                 + +Y  RY+D
Sbjct: 271 KEIQDLRLKMKVKNPRVGTGDEESTGNV--FFK----------------PVNIYAVRYLD 330

Query: 317 EIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMV-SCETHGIRFLGCL------- 376
           EI +  SGSK +    +  I   +++ L L V+R    + S  +  I FLG         
Sbjct: 331 EILVITSGSKMLTMDLKKRIVDILEQRLELRVDRLNTSIHSAVSEKINFLGMYLQAVPPS 390

Query: 377 VRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKHLA 436
           V R  +   AV+++ K + + ++  L+ +         LG K   H LKK+K+S      
Sbjct: 391 VLRPPKSEKAVRAMKKYQRQKDVRKLELRNARERNRKTLGLKIFRHVLKKIKQS------ 450

Query: 437 KNSSLNKISSFRKPGMETDHWYKVLLKIW----MQDLNARAAE--------SEEKILSKH 496
                   + F+  G E ++  + + + W    MQD      E        +    LS  
Sbjct: 451 --------NGFKFEG-EIENEVRDIFQSWGEEVMQDFMGSLEERWKWHWLLTRGDFLSLR 510

Query: 497 AVELSLPFELRDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRK 556
            +   LP +L D++ EFQ  V ++++                  PT   +++        
Sbjct: 511 HIREKLPQDLIDAYDEFQEQVDKHLA------------------PTQAKKVLEXXXXXXX 570

Query: 557 RLLRYRLVTNKGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVR 616
                                                                   + + 
Sbjct: 571 XXXXXXXAER--------------------------------------------TVEDLT 630

Query: 617 KSCIRTLAAKHRIHESEIEKKFDSELSKIYSSSEIDQEKEKSTDTHVLDHDEALKYGISY 676
           K C++  A +  + ++      D      + S   ++E +   D ++ D           
Sbjct: 631 KLCMKVSAPEELVRKAIKVSDLDGREEAHFPS---EREVKMMGDKNLSDPKPV------- 665

Query: 677 SGLCLLSFARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKF------PGWKTGFSSSI 735
            G   L   R+ S     +C    C      ++ +H+++ +          W  G   +I
Sbjct: 691 DGTLSLLLIRLASDEPLHHCAASFCERSDTIMHRVHLLQNRLHINPLDEEKWVPGM-GTI 665

[Close]

BLAST of CsaV3_4G012020 vs. TAIR10
Match: ATMG00520.1 (Intron maturase, type II family protein)

HSP 1 Score: 86.3 bits (212), Expect = 8.8e-17
Identity = 50/136 (36.76%), Postives = 80/136 (58.82%), Query Frame = 0


Query: 127 KVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDE 186
           K+++EAIR+VLE ++ P F   SH  RSG+G  + L+ IK+E     W+   D+ K    
Sbjct: 15  KIMKEAIRMVLESIYDPEFPDTSH-FRSGQGCHSVLRRIKEEWGISRWFLEFDIRKCFHT 74

Query: 187 LVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKG-HGLPQEGVLSPILTNIY 246
           +   +LI +++++I+DPK F  I+ ++ AG L     G  +G + +P   +LS +  NIY
Sbjct: 75  IDRHRLIQILKEEIDDPKFFYSIQKVFSAGRL----VGVERGPYSVPHSVLLSALPGNIY 134

Query: 247 LNLFDQEFFRLSMKYE 262
           L+  DQE  R+  KYE
Sbjct: 135 LHKLDQEIGRIRQKYE 145

[Close]

BLAST of CsaV3_4G012020 vs. TAIR10
Match: ATCG00040.1 (maturase K)

HSP 1 Score: 45.8 bits (107), Expect = 1.3e-04
Identity = 28/101 (27.72%), Postives = 49/101 (48.51%), Query Frame = 0


Query: 524 PVNSIRKRLLRYRLVTNKGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELF 583
           P++SI   L + +     GHP S        ++ I++ FV + R +  +Y+ SS    L+
Sbjct: 388 PISSIIGSLAKDKFCNVLGHPISKATWTDSSDSDILNRFVRICRNISHYYSGSSKKKNLY 447

Query: 584 LIFDQVRKSCIRTLAAKHRIHESEIEKKFDSELSKIYSSSE 625
            I   +R  C++TLA KH+       K+  S L + + + E
Sbjct: 448 RIKYILRLCCVKTLARKHKSTVRTFLKRLGSGLLEEFLTGE 488

[Close]

BLAST of CsaV3_4G012020 vs. Swiss-Prot
Match: sp|Q9CA78|NMAT4_ARATH (Nuclear intron maturase 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NMAT4 PE=3 SV=2)

HSP 1 Score: 843.2 bits (2177), Expect = 2.2e-243
Identity = 439/743 (59.08%), Postives = 548/743 (73.76%), Query Frame = 0


Query: 6   LAINLASLVEESLD--VDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACP 65
           LA  LASLVEES     D  + +++MELKRSLE+R+K+RVK Q +NGKF DL+  VIA P
Sbjct: 56  LAGELASLVEESSSHVDDDSKPRSRMELKRSLELRLKKRVKEQCINGKFSDLLKKVIARP 115

Query: 66  NTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILS--SRKEVLIL 125
            TL++ YDCIR+NSNV I   +  ++F+S+AEELS+G FDV +NTFSI++    KEVL+L
Sbjct: 116 ETLRDAYDCIRLNSNVSITERNGSVAFDSIAEELSSGVFDVASNTFSIVARDKTKEVLVL 175

Query: 126 PKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLS 185
           P + LKV+QEAIRIVLE VF PHFSKISH CRSGRG ++ALKYI   I   DW FT+ L+
Sbjct: 176 PSVALKVVQEAIRIVLEVVFSPHFSKISHSCRSGRGRASALKYINNNISRSDWCFTLSLN 235

Query: 186 KKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPIL 245
           KK+D  V   L++VME+K+ED  L  ++RS++ A  LNLEFGGFPKGHGLPQEGVLS +L
Sbjct: 236 KKLDVSVFENLLSVMEEKVEDSSLSILLRSMFEARVLNLEFGGFPKGHGLPQEGVLSRVL 295

Query: 246 TNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDKI 305
            NIYL+ FD EF+R+SM++EA+     T +D   S+LRSWFRRQ        + E+   +
Sbjct: 296 MNIYLDRFDHEFYRISMRHEALGLDSKTDEDSPGSKLRSWFRRQAGEQGLKSTTEQDVAL 355

Query: 306 RVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCE-THGIRFLG 365
           RVYCCR+MDEI+ +VSG K VA   RSE   F++ +LHLD+  E +   CE T G+R LG
Sbjct: 356 RVYCCRFMDEIYFSVSGPKKVASDIRSEAIGFLRNSLHLDITDETDPSPCEATSGLRVLG 415

Query: 366 CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKH 425
            LVR++V+ESP VK++HKLKEKV LF LQK+E W   TV +GKKWL HGLKKVKESEIK 
Sbjct: 416 TLVRKNVRESPTVKAVHKLKEKVRLFALQKEEAWTLGTVRIGKKWLGHGLKKVKESEIKG 475

Query: 426 LA-KNSSLNKISSFRKPGMETDHWYKVLLKIWMQD-LNARAAESEEKILSKHAVELSLPF 485
           LA  NS+L++IS  RK GMETDHWYK+LL+IWM+D L   A  SEE +LSKH VE ++P 
Sbjct: 476 LADSNSTLSQISCHRKAGMETDHWYKILLRIWMEDVLRTSADRSEEFVLSKHVVEPTVPQ 535

Query: 486 ELRDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLV 545
           ELRD+FY+FQ     Y+SSETA+  ALLP      +P F  +++AP N+I +RL RY L+
Sbjct: 536 ELRDAFYKFQNAAAAYVSSETANLEALLPCPQSHDRPVFFGDVVAPTNAIGRRLYRYGLI 595

Query: 546 TNKGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSEL-FLIFDQVRKSCIRTL 605
           T KG+  S+  LIL D  QIIDW+ G+ RR   WY   SNF E+  LI +Q+R SCIRTL
Sbjct: 596 TAKGYARSNSMLILLDTAQIIDWYSGLVRRWVIWYEGCSNFDEIKALIDNQIRMSCIRTL 655

Query: 606 AAKHRIHESEIEKKFDSELSKIYSSSEIDQE-KEKSTDTHVLDHDEALKYGISYSGLCLL 665
           AAK+RIHE+EIEK+ D ELS I S+ +I+QE + +  D+   D DE L YG+S SGLCLL
Sbjct: 656 AAKYRIHENEIEKRLDLELSTIPSAEDIEQEIQHEKLDSPAFDRDEHLTYGLSNSGLCLL 715

Query: 666 SFARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLC 725
           S AR+VS+SRPCNCFVIGC   AP+VYTLH MERQKFPGWKTGFS  I  SLN RR GLC
Sbjct: 716 SLARLVSESRPCNCFVIGCSMAAPAVYTLHAMERQKFPGWKTGFSVCIPSSLNGRRIGLC 775

Query: 726 KQHLADLYLGRISLQSVDFGAWK 740
           KQHL DLY+G+ISLQ+VDFGAW+
Sbjct: 776 KQHLKDLYIGQISLQAVDFGAWR 798

[Close]

BLAST of CsaV3_4G012020 vs. Swiss-Prot
Match: sp|Q9LZA5|NMAT3_ARATH (Nuclear intron maturase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NMAT3 PE=3 SV=2)

HSP 1 Score: 207.2 bits (526), Expect = 6.2e-52
Identity = 197/768 (25.65%), Postives = 329/768 (42.84%), Query Frame = 0


Query: 17  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTL----QNVYDC 76
           SL ++  ++ T+  +K  LE  + +    QY +GKF  L+ N ++ P  L    QN+   
Sbjct: 31  SLFLNSDQTITEPLVKSELEALVLK----QYSHGKFYSLVKNAVSLPCVLLAACQNL--S 90

Query: 77  IRINSNVDIKSN-DRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQE 136
           +  NS+ D+     R  S E M  E+  G FD+ +     +SS    L+LP +KLKVL E
Sbjct: 91  LSANSSGDLADRVSRRFSIEEMGREIREGRFDIRSCCVEFISSS---LVLPNLKLKVLIE 150

Query: 137 AIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKM-DELVMA 196
           AIR+VLE V+   F+  S+G R G G  TA++Y+K  +++P WWF V  +++M +E  + 
Sbjct: 151 AIRMVLEIVYDDRFATFSYGGRVGMGRHTAIRYLKNSVENPRWWFRVSFAREMFEERNVD 210

Query: 197 KLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFD 256
            L   + +KI D  L  +I+ ++  G L +E GG   G G PQE  L  IL N+Y +  D
Sbjct: 211 ILCGFVGEKINDVMLIEMIKKLFEFGILKIELGGCNSGRGFPQECGLCSILINVYFDGLD 270

Query: 257 QEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDKIRVYCCRYMD 316
           +E   L +K +  N    TG + S   +  +F+                 + +Y  RY+D
Sbjct: 271 KEIQDLRLKMKVKNPRVGTGDEESTGNV--FFK----------------PVNIYAVRYLD 330

Query: 317 EIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMV-SCETHGIRFLGCL------- 376
           EI +  SGSK +    +  I   +++ L L V+R    + S  +  I FLG         
Sbjct: 331 EILVITSGSKMLTMDLKKRIVDILEQRLELRVDRLNTSIHSAVSEKINFLGMYLQAVPPS 390

Query: 377 VRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKHLA 436
           V R  +   AV+++ K + + ++  L+ +         LG K   H LKK+K+S      
Sbjct: 391 VLRPPKSEKAVRAMKKYQRQKDVRKLELRNARERNRKTLGLKIFRHVLKKIKQS------ 450

Query: 437 KNSSLNKISSFRKPGMETDHWYKVLLKIW----MQDLNARAAE--------SEEKILSKH 496
                   + F+  G E ++  + + + W    MQD      E        +    LS  
Sbjct: 451 --------NGFKFEG-EIENEVRDIFQSWGEEVMQDFMGSLEERWKWHWLLTRGDFLSLR 510

Query: 497 AVELSLPFELRDSFYEFQRHVKEYISSETASTL-------ALLPNYDPSAKPT------F 556
            +   LP +L D++ EFQ  V ++++   A  +                A+ T       
Sbjct: 511 HIREKLPQDLIDAYDEFQEQVDKHLAPTQAKKVLEXXXXXXXXXXXXXXAERTVEDLTKL 570

Query: 557 ITEIIAPVNSIRKRLLRYRLVTNKGHPCSSPFLILQDNTQIIDWFV-----GVSRRLFRW 616
             ++ AP   +RK +       + G P     L+  +++ II W+      G +++L R 
Sbjct: 571 CMKVSAPEELVRKAIKLVGFTNSMGRPRPIIHLVTLEDSDIIKWYARHEKHGSTKKLIRH 630

Query: 617 YNNSSNFSELFLIFDQVRKSCIRTLAAKHRIHESEIEKKFDSELSKIYSSSEIDQEKEKS 676
           Y      S+L                      +   E  F SE           +E +  
Sbjct: 631 YTKDLRVSDL----------------------DGREEAHFPSE-----------REVKMM 690

Query: 677 TDTHVLDHDEALKYGISYSGLCLLSFARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQK 735
            D ++ D            G   L   R+ S     +C    C      ++ +H+++ + 
Sbjct: 691 GDKNLSDPKPV-------DGTLSLLLIRLASDEPLHHCAASFCERSDTIMHRVHLLQNRL 715

[Close]

BLAST of CsaV3_4G012020 vs. Swiss-Prot
Match: sp|P0A3U0|LTRA_LACLC (Group II intron-encoded protein LtrA OS=Lactococcus lactis subsp. cremoris OX=1359 GN=ltrA PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-23
Identity = 84/299 (28.09%), Postives = 141/299 (47.16%), Query Frame = 0


Query: 113 SSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDP 172
           S +   L +P    K++QEA+RI+LE ++ P F  +SHG R  R   TALK IK+E    
Sbjct: 94  SKKMRPLGIPTFTDKLIQEAVRIILESIYEPVFEDVSHGFRPQRSCHTALKTIKREFGGA 153

Query: 173 DWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGH-GL 232
            W+   D+    D +    LI ++  KI+D K+  +I     AG   LE   + K + G 
Sbjct: 154 RWFVEGDIKGCFDNIDHVTLIGLINLKIKDMKMSQLIYKFLKAG--YLENWQYHKTYSGT 213

Query: 233 PQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFR------RQ 292
           PQ G+LSP+L NIYL+  D+   +L MK++            S  R+   +R      ++
Sbjct: 214 PQGGILSPLLANIYLHELDKFVLQLKMKFDR----------ESPERITPEYRELHNEIKR 273

Query: 293 LKGNNSDYSGEEKDKIR----------------------VYCCRYMDEIFLAVSGSKDVA 352
           +        GEEK K+                       +   RY D+  ++V GSK+  
Sbjct: 274 ISHRLKKLEGEEKAKVLLEYQEKRKRLPTLPCTSQTNKVLKYVRYADDFIISVKGSKEDC 333

Query: 353 HSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLGCLVRRSVQESPAVKSIHKLKEK 383
              + ++  F+   L ++++ E+ +++  +   RFLG  +R  V+ S  +K   K+K++
Sbjct: 334 QWIKEQLKLFIHNKLKMELSEEKTLITHSSQPARFLGYDIR--VRRSGTIKRSGKVKKR 378

[Close]

BLAST of CsaV3_4G012020 vs. Swiss-Prot
Match: sp|P0A3U1|LTRA_LACLM (Group II intron-encoded protein LtrA OS=Lactococcus lactis subsp. cremoris (strain MG1363) OX=416870 GN=ltrA PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-23
Identity = 84/299 (28.09%), Postives = 141/299 (47.16%), Query Frame = 0


Query: 113 SSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDP 172
           S +   L +P    K++QEA+RI+LE ++ P F  +SHG R  R   TALK IK+E    
Sbjct: 94  SKKMRPLGIPTFTDKLIQEAVRIILESIYEPVFEDVSHGFRPQRSCHTALKTIKREFGGA 153

Query: 173 DWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGH-GL 232
            W+   D+    D +    LI ++  KI+D K+  +I     AG   LE   + K + G 
Sbjct: 154 RWFVEGDIKGCFDNIDHVTLIGLINLKIKDMKMSQLIYKFLKAG--YLENWQYHKTYSGT 213

Query: 233 PQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFR------RQ 292
           PQ G+LSP+L NIYL+  D+   +L MK++            S  R+   +R      ++
Sbjct: 214 PQGGILSPLLANIYLHELDKFVLQLKMKFDR----------ESPERITPEYRELHNEIKR 273

Query: 293 LKGNNSDYSGEEKDKIR----------------------VYCCRYMDEIFLAVSGSKDVA 352
           +        GEEK K+                       +   RY D+  ++V GSK+  
Sbjct: 274 ISHRLKKLEGEEKAKVLLEYQEKRKRLPTLPCTSQTNKVLKYVRYADDFIISVKGSKEDC 333

Query: 353 HSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLGCLVRRSVQESPAVKSIHKLKEK 383
              + ++  F+   L ++++ E+ +++  +   RFLG  +R  V+ S  +K   K+K++
Sbjct: 334 QWIKEQLKLFIHNKLKMELSEEKTLITHSSQPARFLGYDIR--VRRSGTIKRSGKVKKR 378

[Close]

BLAST of CsaV3_4G012020 vs. Swiss-Prot
Match: sp|P03876|AI2M_YEAST (Putative COX1/OXI3 intron 2 protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=AI2 PE=4 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 8.7e-22
Identity = 91/361 (25.21%), Postives = 164/361 (45.43%), Query Frame = 0


Query: 44  KAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFD 103
           K + +N + L LM ++      L   Y+ I+       K ++ +         L+  + D
Sbjct: 277 KTETINTRILKLMSDI----RMLLIAYNKIKSKKGNMSKGSNNITLDGINISYLNKLSKD 336

Query: 104 VNTNTFSILSSRK----------EVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCR 163
           +NTN F     R+            L +   + K++QE++R++LE ++   FS  SHG R
Sbjct: 337 INTNMFKFSPVRRVEIPKTSGGFRPLSVGNPREKIVQESMRMMLEIIYNNSFSYYSHGFR 396

Query: 164 SGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIY 223
                 TA+   K  ++  +W+  VDL+K  D +    LI V+ ++I+D     ++  + 
Sbjct: 397 PNLSCLTAIIQCKNYMQYCNWFIKVDLNKCFDTIPHNMLINVLNERIKDKGFMDLLYKLL 456

Query: 224 LAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEY-----GN 283
            AG ++          G+PQ  V+SPIL NI+L+  D+    L  K+E  NE+      N
Sbjct: 457 RAGYVDKNNNYHNTTLGIPQGSVVSPILCNIFLDKLDK---YLENKFE--NEFNTGNMSN 516

Query: 284 TGQDGSQSRLRSWFRR-----------QLKGNNSDYSGEEKDKIRVYCCRYMDEIFLAVS 343
            G++   + L S   R           +L+ +     G +K   R Y  RY D+I + V 
Sbjct: 517 RGRNPIYNSLSSKIYRCKLLSEKLKLIRLRDHYQRNMGSDKSFKRAYFVRYADDIIIGVM 576

Query: 344 GSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLGCLVRRSVQESPAVKSIH 379
           GS +   +  ++I  F+++ L + +N ++ ++     G+ FLG  V+ +  E    + I 
Sbjct: 577 GSHNDCKNILNDINNFLKENLGMSINMDKSVIKHSKEGVSFLGYDVKVTPWEKRPYRMIK 628

[Close]

BLAST of CsaV3_4G012020 vs. TrEMBL
Match: tr|A0A0A0KWB0|A0A0A0KWB0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G188380 PE=4 SV=1)

HSP 1 Score: 1480.7 bits (3832), Expect = 0.0e+00
Identity = 739/739 (100.00%), Postives = 739/739 (100.00%), Query Frame = 0


Query: 1   MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI 60
           MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI
Sbjct: 61  MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI 120

Query: 61  ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLI 120
           ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLI
Sbjct: 121 ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLI 180

Query: 121 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 180
           LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL
Sbjct: 181 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 240

Query: 181 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI 240
           SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI
Sbjct: 241 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI 300

Query: 241 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK 300
           LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK
Sbjct: 301 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK 360

Query: 301 IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLG 360
           IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLG
Sbjct: 361 IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLG 420

Query: 361 CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKH 420
           CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKH
Sbjct: 421 CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKH 480

Query: 421 LAKNSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPFEL 480
           LAKNSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPFEL
Sbjct: 481 LAKNSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPFEL 540

Query: 481 RDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLVTN 540
           RDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLVTN
Sbjct: 541 RDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLVTN 600

Query: 541 KGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLAAK 600
           KGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLAAK
Sbjct: 601 KGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLAAK 660

Query: 601 HRIHESEIEKKFDSELSKIYSSSEIDQEKEKSTDTHVLDHDEALKYGISYSGLCLLSFAR 660
           HRIHESEIEKKFDSELSKIYSSSEIDQEKEKSTDTHVLDHDEALKYGISYSGLCLLSFAR
Sbjct: 661 HRIHESEIEKKFDSELSKIYSSSEIDQEKEKSTDTHVLDHDEALKYGISYSGLCLLSFAR 720

Query: 661 MVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL 720
           MVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL
Sbjct: 721 MVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL 780

Query: 721 ADLYLGRISLQSVDFGAWK 740
           ADLYLGRISLQSVDFGAWK
Sbjct: 781 ADLYLGRISLQSVDFGAWK 799

[Close]

BLAST of CsaV3_4G012020 vs. TrEMBL
Match: tr|A0A1S3B491|A0A1S3B491_CUCME (uncharacterized protein LOC103486008 OS=Cucumis melo OX=3656 GN=LOC103486008 PE=4 SV=1)

HSP 1 Score: 1411.4 bits (3652), Expect = 0.0e+00
Identity = 703/739 (95.13%), Postives = 721/739 (97.56%), Query Frame = 0


Query: 1   MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI 60
           ME+MKLA+NLASLVEESLDVDLRRSKT+MELKRSLEI+IKERVKAQYLNGKFLDLMGNVI
Sbjct: 63  MEKMKLAMNLASLVEESLDVDLRRSKTRMELKRSLEIQIKERVKAQYLNGKFLDLMGNVI 122

Query: 61  ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLI 120
           ACPNTLQN YDCIRINSNVDIKSND LISFESMA+ELS+GNFDVNTNTFSILSSRKEVLI
Sbjct: 123 ACPNTLQNAYDCIRINSNVDIKSNDCLISFESMAKELSHGNFDVNTNTFSILSSRKEVLI 182

Query: 121 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 180
           LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL
Sbjct: 183 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 242

Query: 181 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI 240
           SKKMDELVMAKLITVMEDKIEDPKLFAVIRSI+LAGALNLEFG FPKGHGLPQEGVLSPI
Sbjct: 243 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIHLAGALNLEFGSFPKGHGLPQEGVLSPI 302

Query: 241 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK 300
           LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQS+LRSWFRRQLK N+SDY GEEKDK
Sbjct: 303 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSKLRSWFRRQLKENSSDYPGEEKDK 362

Query: 301 IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCETHGIRFLG 360
           IRVYCCRYMDEIFLAVSGSKDVA SFRSEIF F+QKTLHLDVN EEEMVSCETHGIRFLG
Sbjct: 363 IRVYCCRYMDEIFLAVSGSKDVALSFRSEIFDFMQKTLHLDVNHEEEMVSCETHGIRFLG 422

Query: 361 CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIKH 420
           CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETW +WTVWLGKKWLAHGLKKVKESEIKH
Sbjct: 423 CLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWKSWTVWLGKKWLAHGLKKVKESEIKH 482

Query: 421 LAKNSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPFEL 480
           LAKNSSLN+ISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVE SLPFEL
Sbjct: 483 LAKNSSLNQISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVEPSLPFEL 542

Query: 481 RDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLVTN 540
           RDSFYEFQR V+EYISSETASTLALLPNYDPS KPTFITEIIAPVNSIRKRL RYRLVTN
Sbjct: 543 RDSFYEFQRRVEEYISSETASTLALLPNYDPSVKPTFITEIIAPVNSIRKRLFRYRLVTN 602

Query: 541 KGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSELFLIFDQVRKSCIRTLAAK 600
           KGHPCSSPFLILQDNTQIIDWF+GVSRR FRWYN SSNFSELFLIFDQVRKSCIRTLAAK
Sbjct: 603 KGHPCSSPFLILQDNTQIIDWFLGVSRRWFRWYNKSSNFSELFLIFDQVRKSCIRTLAAK 662

Query: 601 HRIHESEIEKKFDSELSKIYSSSEIDQEKEKSTDTHVLDHDEALKYGISYSGLCLLSFAR 660
           H+IHESEIEKKFDSELSKIYSS EI+QEKEKSTDTHVLDHDEAL YGISYSGLCLLS AR
Sbjct: 663 HQIHESEIEKKFDSELSKIYSSPEIEQEKEKSTDTHVLDHDEALNYGISYSGLCLLSLAR 722

Query: 661 MVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL 720
           MVS+SRPCNCFV+GCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL
Sbjct: 723 MVSRSRPCNCFVVGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLCKQHL 782

Query: 721 ADLYLGRISLQSVDFGAWK 740
           ADLYLGRISLQSVDFGAWK
Sbjct: 783 ADLYLGRISLQSVDFGAWK 801

[Close]

BLAST of CsaV3_4G012020 vs. TrEMBL
Match: tr|A0A251QAF9|A0A251QAF9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G034000 PE=4 SV=1)

HSP 1 Score: 993.0 bits (2566), Expect = 3.5e-286
Identity = 502/745 (67.38%), Postives = 610/745 (81.88%), Query Frame = 0


Query: 1   MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI 60
           +  MKLA NLA+LV+ES  +D RR K++MELKRSLE+RIK+RVK QY+NGKF +LM  VI
Sbjct: 157 IHEMKLAENLANLVKESSHMDERRPKSRMELKRSLELRIKKRVKEQYINGKFRNLMAKVI 216

Query: 61  ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSI--LSSRKEV 120
           + P TL++ YDCIR+NSN++   ND   SF+S+A+EL  G+FDVN NTFSI    +R+EV
Sbjct: 217 SNPETLRDAYDCIRLNSNINTAFNDDNTSFDSIAKELGCGSFDVNANTFSISKKGAREEV 276

Query: 121 LILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTV 180
           L+LP I L+V+QEAIRIVLE V++P FSKISHG RSGRGHSTALKYI KEI +PDWWFT+
Sbjct: 277 LVLPNINLRVIQEAIRIVLEVVYKPDFSKISHGYRSGRGHSTALKYISKEISNPDWWFTL 336

Query: 181 DLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLS 240
            ++KK+D  ++ KLITVMEDK+EDP L+A+I+S++ A  LNLEFGGFPKGHGLPQEGVLS
Sbjct: 337 LINKKLDACILGKLITVMEDKVEDPSLYAMIQSMFNANVLNLEFGGFPKGHGLPQEGVLS 396

Query: 241 PILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEK 300
            IL NIYLN FD EF+RLSMKYEA++   ++ Q  SQS+LRSWFRR+LKGN+   +GEE 
Sbjct: 397 SILMNIYLNQFDYEFYRLSMKYEALSPSLHSDQK-SQSKLRSWFRRRLKGNDLGCAGEES 456

Query: 301 DKIRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCE-THGIR 360
             IRV+ CR+MDEIF +V+GSKD A  F+SE+  ++QK+LHLDV+ + E++SC+  HGIR
Sbjct: 457 FSIRVHSCRFMDEIFFSVAGSKDAALDFKSEVLNYLQKSLHLDVDDQAELLSCQMLHGIR 516

Query: 361 FLGCLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESE 420
           FLG LVRR+V+ESPA +++HKLKEKV LFGLQK+E WNA TV +GKKWL HGLKKVKESE
Sbjct: 517 FLGTLVRRNVRESPATRAVHKLKEKVALFGLQKEEAWNAGTVSIGKKWLGHGLKKVKESE 576

Query: 421 IKHLAK-NSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSL 480
           IKHLA   S L+KIS FRK GMETDHWYK LLKIWM+D+NA+AAESE+ ILSK+  E +L
Sbjct: 577 IKHLADCRSVLSKISHFRKSGMETDHWYKHLLKIWMEDVNAKAAESEDAILSKYVAEPAL 636

Query: 481 PFELRDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYR 540
           P ELR+SFYEFQR VK Y+SSET STL+LLP+   S +   ITEIIAPVN+I+KRLLRY 
Sbjct: 637 PQELRNSFYEFQRQVKTYVSSETTSTLSLLPSAASSTESVIITEIIAPVNAIKKRLLRYG 696

Query: 541 LVTNKGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSEL-FLIFDQVRKSCIR 600
           L T+ G+P +S  LILQDN QIIDWF G+ RR  RWY    NF+E+  LI + VRKSCIR
Sbjct: 697 LTTSDGYPRTSSLLILQDNDQIIDWFSGIVRRWLRWYAECDNFNEVKLLISNIVRKSCIR 756

Query: 601 TLAAKHRIHESEIEKKFDSELSKIYSSSEIDQEK-EKSTDTHVLDHDEALKYGISYSGLC 660
           TLAAK+R+HE+EIEK+FD+ELS+I S+ EI+QE   +++D    D+DEAL YGISYSGLC
Sbjct: 757 TLAAKYRVHETEIEKRFDTELSRIPSTQEIEQEMVNETSDAQSYDNDEALTYGISYSGLC 816

Query: 661 LLSFARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFG 720
           LLS ARMVS+SRPCNCFV GC+APAPSVYTLHVMERQKFPGW TGFSS IHPSLN+RR G
Sbjct: 817 LLSLARMVSESRPCNCFVNGCMAPAPSVYTLHVMERQKFPGWNTGFSSCIHPSLNRRRLG 876

Query: 721 LCKQHLADLYLGRISLQSVDFGAWK 740
           LCKQHL DLYLG ISLQS++FG WK
Sbjct: 877 LCKQHLKDLYLGHISLQSINFGVWK 900

[Close]

BLAST of CsaV3_4G012020 vs. TrEMBL
Match: tr|A0A2I4F7E7|A0A2I4F7E7_9ROSI (uncharacterized protein LOC108996256 OS=Juglans regia OX=51240 GN=LOC108996256 PE=4 SV=1)

HSP 1 Score: 988.0 bits (2553), Expect = 1.1e-284
Identity = 497/742 (66.98%), Postives = 605/742 (81.54%), Query Frame = 0


Query: 3   RMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIAC 62
           +M LA+NLA +VEES  VD R+ K++MELKR  E+RIK+RVK QY++GKF DLM  VIA 
Sbjct: 65  KMTLAMNLACVVEESSCVDERKPKSRMELKRYCELRIKKRVKEQYMDGKFQDLMTKVIAN 124

Query: 63  PNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILS--SRKEVLI 122
           P+TLQ+ Y+CIR+NSNVDI  N+    F SMAEEL +G+FDV  NTFSI +  + KE L+
Sbjct: 125 PDTLQDAYNCIRLNSNVDISINNDRFDFSSMAEELCSGSFDVKVNTFSISTKGANKETLV 184

Query: 123 LPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDL 182
           LP ++LK++QEAIRI+LE +++P+FSKISHGCRSGRGHS+ALKYI KEI +PDWWFTV +
Sbjct: 185 LPTLRLKIVQEAIRIILEVIYKPYFSKISHGCRSGRGHSSALKYISKEISNPDWWFTVHI 244

Query: 183 SKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI 242
           +KK+D  V+AKLI++ME KIEDP L+A+I S++ A  LNLEFGGFPKGHGLPQEGVLS I
Sbjct: 245 NKKLDACVLAKLISIMEGKIEDPSLYAIIHSMFDAQVLNLEFGGFPKGHGLPQEGVLSAI 304

Query: 243 LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEKDK 302
           L NIYL+LFD+EF+RLSMKYEA++   ++ +DGS S LRSWFRRQLK N+ +   E    
Sbjct: 305 LINIYLDLFDREFYRLSMKYEALDPSIHSNRDGSYSMLRSWFRRQLKDNDLNCQSENNIG 364

Query: 303 IRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCE-THGIRFL 362
           IRV+ CR+MDEIF A+SGS++VA SF+SEI  +++ +LHLD++ + E++ CE    IRFL
Sbjct: 365 IRVHSCRFMDEIFFAISGSEEVALSFKSEILNYLRNSLHLDIDNQTELLPCEGPQEIRFL 424

Query: 363 GCLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESEIK 422
           G LVRRS++ESPAVK++HKLKEKVELF LQKQE W+A T+ +GKKWL HGLKKVKESEIK
Sbjct: 425 GYLVRRSIKESPAVKAVHKLKEKVELFALQKQEAWDAGTIRIGKKWLGHGLKKVKESEIK 484

Query: 423 HLA-KNSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSLPF 482
           HLA  NS L +IS  RK GMETDHWYK LLKIWMQD  A+AA+SEE ILSK+  E SLP 
Sbjct: 485 HLADSNSVLGQISHLRKAGMETDHWYKHLLKIWMQDAKAKAAKSEEIILSKYVAEPSLPQ 544

Query: 483 ELRDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYRLV 542
           EL+DSFYEFQR  +EY+S+ETASTLAL+PNY  S      TEIIAPVN+I+KRLLRY L 
Sbjct: 545 ELKDSFYEFQRCAEEYVSAETASTLALMPNYSSSCDSETTTEIIAPVNAIKKRLLRYGLA 604

Query: 543 TNKGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSEL-FLIFDQVRKSCIRTL 602
           TN G+P ++  LILQDN QIIDWF GV RR  RW++   N +E+  LI DQ+RKSCIRTL
Sbjct: 605 TNDGYPRTTTLLILQDNIQIIDWFSGVVRRWLRWWSECDNVNEVKLLISDQLRKSCIRTL 664

Query: 603 AAKHRIHESEIEKKFDSELSKIYSSSEIDQEKE-KSTDTHVLDHDEALKYGISYSGLCLL 662
           AAK+RIHE+EIEK+FDSELS+I S+ EI+QE   + ++  V D+DEAL YGISYSGLCLL
Sbjct: 665 AAKYRIHENEIEKRFDSELSRIPSTQEIEQEMAYEKSNNQVFDNDEALMYGISYSGLCLL 724

Query: 663 SFARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFGLC 722
           S ARMV++SRPCNCFV+GC +PAPSVYTLHVMERQKFPGWKTGFSS IHPSLN+RR GLC
Sbjct: 725 SLARMVTESRPCNCFVMGCPSPAPSVYTLHVMERQKFPGWKTGFSSCIHPSLNRRRIGLC 784

Query: 723 KQHLADLYLGRISLQSVDFGAW 739
           KQHL DLYLG ISLQS+DFGAW
Sbjct: 785 KQHLKDLYLGNISLQSIDFGAW 806

[Close]

BLAST of CsaV3_4G012020 vs. TrEMBL
Match: tr|A0A251QAC5|A0A251QAC5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G034000 PE=4 SV=1)

HSP 1 Score: 986.1 bits (2548), Expect = 4.3e-284
Identity = 500/742 (67.39%), Postives = 608/742 (81.94%), Query Frame = 0


Query: 1   MERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVI 60
           +  MKLA NLA+LV+ES  +D RR K++MELKRSLE+RIK+RVK QY+NGKF +LM  VI
Sbjct: 157 IHEMKLAENLANLVKESSHMDERRPKSRMELKRSLELRIKKRVKEQYINGKFRNLMAKVI 216

Query: 61  ACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSI--LSSRKEV 120
           + P TL++ YDCIR+NSN++   ND   SF+S+A+EL  G+FDVN NTFSI    +R+EV
Sbjct: 217 SNPETLRDAYDCIRLNSNINTAFNDDNTSFDSIAKELGCGSFDVNANTFSISKKGAREEV 276

Query: 121 LILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTV 180
           L+LP I L+V+QEAIRIVLE V++P FSKISHG RSGRGHSTALKYI KEI +PDWWFT+
Sbjct: 277 LVLPNINLRVIQEAIRIVLEVVYKPDFSKISHGYRSGRGHSTALKYISKEISNPDWWFTL 336

Query: 181 DLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLS 240
            ++KK+D  ++ KLITVMEDK+EDP L+A+I+S++ A  LNLEFGGFPKGHGLPQEGVLS
Sbjct: 337 LINKKLDACILGKLITVMEDKVEDPSLYAMIQSMFNANVLNLEFGGFPKGHGLPQEGVLS 396

Query: 241 PILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSGEEK 300
            IL NIYLN FD EF+RLSMKYEA++   ++ Q  SQS+LRSWFRR+LKGN+   +GEE 
Sbjct: 397 SILMNIYLNQFDYEFYRLSMKYEALSPSLHSDQK-SQSKLRSWFRRRLKGNDLGCAGEES 456

Query: 301 DKIRVYCCRYMDEIFLAVSGSKDVAHSFRSEIFYFVQKTLHLDVNREEEMVSCE-THGIR 360
             IRV+ CR+MDEIF +V+GSKD A  F+SE+  ++QK+LHLDV+ + E++SC+  HGIR
Sbjct: 457 FSIRVHSCRFMDEIFFSVAGSKDAALDFKSEVLNYLQKSLHLDVDDQAELLSCQMLHGIR 516

Query: 361 FLGCLVRRSVQESPAVKSIHKLKEKVELFGLQKQETWNAWTVWLGKKWLAHGLKKVKESE 420
           FLG LVRR+V+ESPA +++HKLKEKV LFGLQK+E WNA TV +GKKWL HGLKKVKESE
Sbjct: 517 FLGTLVRRNVRESPATRAVHKLKEKVALFGLQKEEAWNAGTVSIGKKWLGHGLKKVKESE 576

Query: 421 IKHLAK-NSSLNKISSFRKPGMETDHWYKVLLKIWMQDLNARAAESEEKILSKHAVELSL 480
           IKHLA   S L+KIS FRK GMETDHWYK LLKIWM+D+NA+AAESE+ ILSK+  E +L
Sbjct: 577 IKHLADCRSVLSKISHFRKSGMETDHWYKHLLKIWMEDVNAKAAESEDAILSKYVAEPAL 636

Query: 481 PFELRDSFYEFQRHVKEYISSETASTLALLPNYDPSAKPTFITEIIAPVNSIRKRLLRYR 540
           P ELR+SFYEFQR VK Y+SSET STL+LLP+   S +   ITEIIAPVN+I+KRLLRY 
Sbjct: 637 PQELRNSFYEFQRQVKTYVSSETTSTLSLLPSAASSTESVIITEIIAPVNAIKKRLLRYG 696

Query: 541 LVTNKGHPCSSPFLILQDNTQIIDWFVGVSRRLFRWYNNSSNFSEL-FLIFDQVRKSCIR 600
           L T+ G+P +S  LILQDN QIIDWF G+ RR  RWY    NF+E+  LI + VRKSCIR
Sbjct: 697 LTTSDGYPRTSSLLILQDNDQIIDWFSGIVRRWLRWYAECDNFNEVKLLISNIVRKSCIR 756

Query: 601 TLAAKHRIHESEIEKKFDSELSKIYSSSEIDQEK-EKSTDTHVLDHDEALKYGISYSGLC 660
           TLAAK+R+HE+EIEK+FD+ELS+I S+ EI+QE   +++D    D+DEAL YGISYSGLC
Sbjct: 757 TLAAKYRVHETEIEKRFDTELSRIPSTQEIEQEMVNETSDAQSYDNDEALTYGISYSGLC 816

Query: 661 LLSFARMVSQSRPCNCFVIGCLAPAPSVYTLHVMERQKFPGWKTGFSSSIHPSLNKRRFG 720
           LLS ARMVS+SRPCNCFV GC+APAPSVYTLHVMERQKFPGW TGFSS IHPSLN+RR G
Sbjct: 817 LLSLARMVSESRPCNCFVNGCMAPAPSVYTLHVMERQKFPGWNTGFSSCIHPSLNRRRLG 876

Query: 721 LCKQHLADLYLGRISLQSVDFG 737
           LCKQHL DLYLG ISLQS++FG
Sbjct: 877 LCKQHLKDLYLGHISLQSINFG 897

The following BLAST results are available for this feature:

BLAST of CsaV3_4G012020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653460.1	0.0e+00	100.00	PREDICTED: uncharacterized protein LOC101219510 [Cucumis sativus] >KGN53910.1 hy...	[more]
XP_008442019.1	0.0e+00	95.13	PREDICTED: uncharacterized protein LOC103486008 [Cucumis melo]	[more]
XP_022146069.1	0.0e+00	83.96	nuclear intron maturase 4, mitochondrial isoform X3 [Momordica charantia]	[more]
XP_022146067.1	0.0e+00	83.96	nuclear intron maturase 4, mitochondrial isoform X1 [Momordica charantia]	[more]
XP_022146068.1	0.0e+00	83.96	nuclear intron maturase 4, mitochondrial isoform X2 [Momordica charantia]	[more]

BLAST of CsaV3_4G012020 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G74350.1	1.2e-244	59.08	Intron maturase, type II family protein	[more]
AT5G04050.2	2.2e-44	24.13	RNA-directed DNA polymerase (reverse transcriptase)	[more]
ATMG00520.1	8.8e-17	36.76	Intron maturase, type II family protein	[more]
ATCG00040.1	1.3e-04	27.72	maturase K	[more]

BLAST of CsaV3_4G012020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CA78\|NMAT4_ARATH	2.2e-243	59.08	Nuclear intron maturase 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NMAT...	[more]
sp\|Q9LZA5\|NMAT3_ARATH	6.2e-52	25.65	Nuclear intron maturase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NMAT...	[more]
sp\|P0A3U0\|LTRA_LACLC	1.2e-23	28.09	Group II intron-encoded protein LtrA OS=Lactococcus lactis subsp. cremoris OX=13...	[more]
sp\|P0A3U1\|LTRA_LACLM	1.2e-23	28.09	Group II intron-encoded protein LtrA OS=Lactococcus lactis subsp. cremoris (stra...	[more]
sp\|P03876\|AI2M_YEAST	8.7e-22	25.21	Putative COX1/OXI3 intron 2 protein OS=Saccharomyces cerevisiae (strain ATCC 204...	[more]

BLAST of CsaV3_4G012020 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KWB0\|A0A0A0KWB0_CUCSA	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G188380 PE=4 SV=1	[more]
tr\|A0A1S3B491\|A0A1S3B491_CUCME	0.0e+00	95.13	uncharacterized protein LOC103486008 OS=Cucumis melo OX=3656 GN=LOC103486008 PE=...	[more]
tr\|A0A251QAF9\|A0A251QAF9_PRUPE	3.5e-286	67.38	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G034000 PE=4 SV=1	[more]
tr\|A0A2I4F7E7\|A0A2I4F7E7_9ROSI	1.1e-284	66.98	uncharacterized protein LOC108996256 OS=Juglans regia OX=51240 GN=LOC108996256 P...	[more]
tr\|A0A251QAC5\|A0A251QAC5_PRUPE	4.3e-284	67.39	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G034000 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006397	mRNA processing

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom
IPR024937	Domain_X

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G012020.1	CsaV3_4G012020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024937	Domain X	PFAM	PF01348	Intron_maturas2	coord: 520..632 e-value: 1.5E-12 score: 47.5
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 120..360 e-value: 5.2E-14 score: 52.2
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..363 score: 10.864
None	No IPR available	PANTHER	PTHR33642:SF3	INTRON MATURASE, TYPE II FAMILY PROTEIN	coord: 3..739
None	No IPR available	PANTHER	PTHR33642	FAMILY NOT NAMED	coord: 3..739
None	No IPR available	CDD	cd01651	RT_G2_intron	coord: 122..360 e-value: 1.07749E-40 score: 148.118
None	No IPR available	SUPERFAMILY	SSF56672	DNA/RNA polymerases	coord: 299..382 coord: 124..261

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G012020	CSPI04G10980	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G012020	CsGy4G010530	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G012020	Cla012109	Watermelon (97103) v1	cucwmB356
CsaV3_4G012020	MELO3C008840	Melon (DHL92) v3.5.1	cucmeB328
CsaV3_4G012020	ClCG04G005530	Watermelon (Charleston Gray)	cucwcgB320
CsaV3_4G012020	Lsi01G016890	Bottle gourd (USVL1VR-Ls)	cuclsiB280
CsaV3_4G012020	MELO3C008840.2	Melon (DHL92) v3.6.1	cucmedB321
CsaV3_4G012020	Cla97C04G072120	Watermelon (97103) v2	cucwmbB309
CsaV3_4G012020	Bhi03G001860	Wax gourd	cucwgoB410

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G012020	Silver-seed gourd	carcucB0615
CsaV3_4G012020	Silver-seed gourd	carcucB1075
CsaV3_4G012020	Cucumber (Gy14) v1	cgycucB516
CsaV3_4G012020	Cucurbita maxima (Rimu)	cmacucB0792
CsaV3_4G012020	Cucurbita maxima (Rimu)	cmacucB1017
CsaV3_4G012020	Cucurbita moschata (Rifu)	cmocucB0774
CsaV3_4G012020	Cucurbita moschata (Rifu)	cmocucB1000
CsaV3_4G012020	Cucurbita pepo (Zucchini)	cpecucB0085
CsaV3_4G012020	Cucurbita pepo (Zucchini)	cpecucB0612