CsaV3_4G010580 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G010580
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Description60S ribosomal protein L6
Locationchr4 : 8462992 .. 8465386 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCTAAAAATTTAGTATAAATAATGTAGAAGATTTTGTTCTATATCCCATTTTTAATGGAAAAAATAAGGACGATTTTGCTAAAATTCAAACTATGTGAGTCGAGATTGGACGAAAGTTGACGTGAAATAAACGGGGCCTTCCAGTGTAATGGGCGTATAAACCCCTAAAATTTAATAATTTAACCCTTAATTTTCTCTCTAGGGCTTTTGGCGAGTAGAGGAACGAAGGCGACGGTGCCAAATTCTCAGAAGTTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCTGCTGAGAAGCCGCCCAAATTTTACCCAGCCGATGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTTCATCTCTCTCGATCTTCTTTCTTTCGATGCTATGTTTTTACTCAATGTCTTGGAATCCATATTGCTTTCTGAGGAATTGGAGTAATTAGAGTCCATGCTGTAGCTATGGAGAAGCGGGAATTTCTGAAGAGAGATTAGTTTTACACTTGATTTAAGTTTTGGGTTTCGAATTGGGTGATCTGAAGTGAATTTTTGCTCATTTTTCTATTAAGCAATATTTGGTTCTGGGGGTGTGTTCATCTAACTTAGTTTCGTTGATTTTTATACTATTTACAGGTCCAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCGTCTGGGCTGCTTTTAGTGACTGGTGTGTTTTGATGAATCTCTAATTGTCTGTCTTTATAAATTTTGTTTTGTTATCAAAAAGTGTTGGGGATTCTGTTCATGGGGTTAGTTTTTGTTTTTCCACATTCTTTGTGGACTTGTGTTAGATTTGCATTGGAAGTCTTATTTATGATATCTTAGCATCATAACAGTTATTTGCCTTAGGTTTACATATTATCTCAAATGCGTTACCTGCATAACAAGAAGGAAGAAGTTGGATACTTTGGGTTTTACATTTTGACAGTATTAATTGTTGAACCTCGAAAGCAGTTAATATTGAAATGTCTCACGTCTTGTATTCTGCCCATTTCTCCGGCCAATCGACTTTACATACCACTGAAATGCCTCATGCTTCCTTTTATGAATATATGCCCTGCTAATGGTCTTTTCATCCCATAAGTTTCTAAGCTTTATGTGCATTATCTTCTATTGTTTTCTTATGATGGTTGTGGGTACGGGTAGGGGTTAGTGTCTGAGTAGTCCTACATGTTTAGGAGAAAGGATGTATATAAAATAGTGATTGGCGGAGGCTATTGATTTCAAATTAGCAATTCTTGAACCTGCTAAGGATTATCTTAATTTGATTTTTGTCATTTTAGGGCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGGGTCAATGTGGAGAAATTTGGTGACAAATATTTCTCCAAGGAAGTTCATCAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGTACTCATCCTGTTTTTGATTTGTCCAAATAGTTTAAAGTTTTATCATTTCTTTGTCCTGATTTGAGGTTGCCATTGTTACATGCAGGAAAAAAGTGCGCTCCCACAGGAGAAAAAGGATGACCAGAAGGCCGTGGACTCGGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTGAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAGATATTTTCTGTGTGGTTTCTGATACGCCTCTTGGGGAATTTGATCCCTATAATCTTCTTGTTCATGTTTTGTTATGAGGGTTGTAGATTTGAAATTATGTCTCGCAATGAATTTTGTAGTGAAGTTTATTCATCAAATCCTACATTACGTGGCTTCCTTTGACTGGTGAGAGTGATAAGACATGTAATTTTTGTTCAATTTCTGGCTGGTGAAATACTTGAGAAACACATTGATAAAGATAGATCGGTTGACTTACAATGGTGCATGGCCATGTTTGATTAGTATGCAACGTCAGAGAGTGGGCAATGTATGCTTGAATCTCATATATTTGGGGTTTCTTTTTCAATTTGGTTAAAATGATATTTTCTTCTCTGCCCTTCACTTGTTTATCATATGATAATAATTTTACTGTTGGCATGTATGGAGCGATCTTGAAAAAATTAAAATCACTTTTG

mRNA sequence

ATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCTGCTGAGAAGCCGCCCAAATTTTACCCAGCCGATGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCGTCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGGGTCAATGTGGAGAAATTTGGTGACAAATATTTCTCCAAGGAAGTTCATCAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTGCGCTCCCACAGGAGAAAAAGGATGACCAGAAGGCCGTGGACTCGGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTGAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAG

Coding sequence (CDS)

ATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCTGCTGAGAAGCCGCCCAAATTTTACCCAGCCGATGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCGTCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGGGTCAATGTGGAGAAATTTGGTGACAAATATTTCTCCAAGGAAGTTCATCAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTGCGCTCCCACAGGAGAAAAAGGATGACCAGAAGGCCGTGGACTCGGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTGAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAG

Protein sequence

MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Homology
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BLAST of CsaV3_4G010580 vs. NCBI nr
Match: XP_004150161.2 (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis sativus])

HSP 1 Score: 446.0 bits (1146), Expect = 7.6e-122
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 

Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

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BLAST of CsaV3_4G010580 vs. NCBI nr
Match: KGN53829.1 (hypothetical protein Csa_4G153800 [Cucumis sativus])

HSP 1 Score: 446.0 bits (1146), Expect = 7.6e-122
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 

Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP
Sbjct: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE
Sbjct: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 284

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BLAST of CsaV3_4G010580 vs. NCBI nr
Match: XP_008460790.1 (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo])

HSP 1 Score: 431.8 bits (1109), Expect = 1.5e-117
Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 0 

Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKADSPAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQVKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]
BLAST of CsaV3_4G010580 vs. NCBI nr
Match: XP_022935449.1 (60S ribosomal protein L6-1-like [Cucurbita moschata])

HSP 1 Score: 427.2 bits (1097), Expect = 3.6e-116
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 0 

Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D+PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]
BLAST of CsaV3_4G010580 vs. NCBI nr
Match: XP_004149609.1 (PREDICTED: 60S ribosomal protein L6-2-like [Cucumis sativus] >KGN58615.1 hypothetical protein Csa_3G698560 [Cucumis sativus])

HSP 1 Score: 426.4 bits (1095), Expect = 6.2e-116
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 0 

Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA++PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]
BLAST of CsaV3_4G010580 vs. TAIR10
Match: AT1G74050.1 (Ribosomal protein L6 family protein)

HSP 1 Score: 365.9 bits (938), Expect = 1.8e-101
Identity = 185/228 (81.14%), Postives = 205/228 (89.91%), Query Frame = 0 

Query: 4   KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 63
           +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R  KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]
BLAST of CsaV3_4G010580 vs. TAIR10
Match: AT1G74060.1 (Ribosomal protein L6 family protein)

HSP 1 Score: 365.9 bits (938), Expect = 1.8e-101
Identity = 185/228 (81.14%), Postives = 205/228 (89.91%), Query Frame = 0 

Query: 4   KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 63
           +TA+V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R  KP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]
BLAST of CsaV3_4G010580 vs. TAIR10
Match: AT1G18540.1 (Ribosomal protein L6 family protein)

HSP 1 Score: 318.9 bits (816), Expect = 2.5e-87
Identity = 165/230 (71.74%), Postives = 184/230 (80.00%), Query Frame = 0 

Query: 2   APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPK 61
           A +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D+P EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RKPKPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKF DKYF K   +K               
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKXXXXXXXXXXXXXXX 183

Query: 182 KSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
                      QK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 XXXXXXXXXXXQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]
BLAST of CsaV3_4G010580 vs. Swiss-Prot
Match: sp|P34091|RL6_MESCR (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 6.6e-101
Identity = 188/224 (83.93%), Postives = 201/224 (89.73%), Query Frame = 0 

Query: 8   VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADD 67
           VSRNPEL+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADD
Sbjct: 11  VSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADD 70

Query: 68  VKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 127
           VKKPL+NKRKPKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGV
Sbjct: 71  VKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGV 130

Query: 128 PLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQ 187
           PLRRVNQ+YVIATSTKVDI+GVNVEKF DKYF K+  +K KKGEGEFFEAEK+E + LPQ
Sbjct: 131 PLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQ 190

Query: 188 EKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKKDDQKAVD ALLK+IE V +LK YL ARFSLKAGMKPHELVF
Sbjct: 191 EKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

[Close]
BLAST of CsaV3_4G010580 vs. Swiss-Prot
Match: sp|Q9C9C6|RL62_ARATH (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.3e-100
Identity = 185/228 (81.14%), Postives = 205/228 (89.91%), Query Frame = 0 

Query: 4   KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 63
           +TA+V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R  KP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]
BLAST of CsaV3_4G010580 vs. Swiss-Prot
Match: sp|Q9C9C5|RL63_ARATH (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.3e-100
Identity = 185/228 (81.14%), Postives = 205/228 (89.91%), Query Frame = 0 

Query: 4   KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 63
           +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R  KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]
BLAST of CsaV3_4G010580 vs. Swiss-Prot
Match: sp|Q9FZ76|RL61_ARATH (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.6e-86
Identity = 165/230 (71.74%), Postives = 184/230 (80.00%), Query Frame = 0 

Query: 2   APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPK 61
           A +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D+P EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RKPKPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKF DKYF K   +K               
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKXXXXXXXXXXXXXXX 183

Query: 182 KSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
                      QK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 XXXXXXXXXXXQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]
BLAST of CsaV3_4G010580 vs. Swiss-Prot
Match: sp|Q6QMZ4|RL6_CHILA (60S ribosomal protein L6 OS=Chinchilla lanigera OX=34839 GN=RPL6 PE=2 SV=3)

HSP 1 Score: 176.8 bits (447), Expect = 2.8e-43
Identity = 114/246 (46.34%), Postives = 148/246 (60.16%), Query Frame = 0 

Query: 9   SRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKP--------- 68
           SRNP L+RG+G+YSRS                        K K  +   KP         
Sbjct: 45  SRNPVLVRGIGRYSRSXXXXXXXXXXXXXXXXXXXVEXXKKEKVLATVTKPVGGDKNGGT 104

Query: 69  --------PKFYPADDVKKPLVNKRKPKP-----TKLRSSITPGTVLIILTGRFKGKRVV 128
                   P++YP +DV + L++  K KP      KLR+SITPGTVLIILTGR +GKRVV
Sbjct: 105 RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRKLRASITPGTVLIILTGRHRGKRVV 164

Query: 129 FLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEK-FGDKYFSKEVHQ 188
           FLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTK+DI+ V + K   D YF K+  +
Sbjct: 165 FLKQLASGLLLVTGPLNLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLR 224

Query: 189 KKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMK 232
           K +  EGE F+ EK E+  + +++K DQKAVDS +L  I+AV  L+ YL + F+L  G+ 
Sbjct: 225 KPRHQEGEIFDTEK-ERYQISEQRKVDQKAVDSQILPKIKAVPQLRGYLRSVFALTNGIY 284

[Close]
BLAST of CsaV3_4G010580 vs. TrEMBL
Match: tr|A0A0A0KYA4|A0A0A0KYA4_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_4G153800 PE=3 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 5.0e-122
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 

Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP
Sbjct: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE
Sbjct: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 284

[Close]
BLAST of CsaV3_4G010580 vs. TrEMBL
Match: tr|A0A1S3CD97|A0A1S3CD97_CUCME (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499552 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 9.8e-118
Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 0 

Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKADSPAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQVKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]
BLAST of CsaV3_4G010580 vs. TrEMBL
Match: tr|A0A0A0L9J7|A0A0A0L9J7_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 4.1e-116
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 0 

Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA++PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]
BLAST of CsaV3_4G010580 vs. TrEMBL
Match: tr|A0A1S3CFY6|A0A1S3CFY6_CUCME (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 1.6e-115
Identity = 219/231 (94.81%), Postives = 225/231 (97.40%), Query Frame = 0 

Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK ++PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQK VDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]
BLAST of CsaV3_4G010580 vs. TrEMBL
Match: tr|A0A2C9VHA3|A0A2C9VHA3_MANES (60S ribosomal protein L6 OS=Manihot esculenta OX=3983 GN=MANES_07G002900 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 2.3e-106
Identity = 195/231 (84.42%), Postives = 217/231 (93.94%), Query Frame = 0 

Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKT +VSRNP+L+RG+GKYSRS+MYHKRGLWAIKAKNGGVFP+HD KPK  +PAEKPP
Sbjct: 1   MAPKTPKVSRNPDLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPAAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPL+NKRKPKPTKLR+SITPG+VLIIL GRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLLNKRKPKPTKLRASITPGSVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFK+NGVPLRRVNQSYVIATSTKVDI+GVNV+KFGDKYF+K+V +KK+KGE EFFE +KE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNVDKFGDKYFAKQVEKKKRKGESEFFEGDKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EK+ LPQEKKDDQK+VD+ L+KSIE V DLK YL ARFSLKAGMKPHELVF
Sbjct: 181 EKNVLPQEKKDDQKSVDAPLIKSIEGVPDLKAYLGARFSLKAGMKPHELVF 231

The following BLAST results are available for this feature:
BLAST of CsaV3_4G010580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150161.27.6e-122100.00PREDICTED: 60S ribosomal protein L6-1-like [Cucumis sativus][more]
KGN53829.17.6e-122100.00hypothetical protein Csa_4G153800 [Cucumis sativus][more]
XP_008460790.11.5e-11797.40PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo][more]
XP_022935449.13.6e-11695.2460S ribosomal protein L6-1-like [Cucurbita moschata][more]
XP_004149609.16.2e-11695.24PREDICTED: 60S ribosomal protein L6-2-like [Cucumis sativus] >KGN58615.1 hypothe... [more]
BLAST of CsaV3_4G010580 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G74050.11.8e-10181.14Ribosomal protein L6 family protein[more]
AT1G74060.11.8e-10181.14Ribosomal protein L6 family protein[more]
AT1G18540.12.5e-8771.74Ribosomal protein L6 family protein[more]
BLAST of CsaV3_4G010580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P34091|RL6_MESCR6.6e-10183.9360S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S... [more]
sp|Q9C9C6|RL62_ARATH3.3e-10081.1460S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1[more]
sp|Q9C9C5|RL63_ARATH3.3e-10081.1460S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1[more]
sp|Q9FZ76|RL61_ARATH4.6e-8671.7460S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1[more]
sp|Q6QMZ4|RL6_CHILA2.8e-4346.3460S ribosomal protein L6 OS=Chinchilla lanigera OX=34839 GN=RPL6 PE=2 SV=3[more]
BLAST of CsaV3_4G010580 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KYA4|A0A0A0KYA4_CUCSA5.0e-122100.0060S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_4G153800 PE=3 SV=1[more]
tr|A0A1S3CD97|A0A1S3CD97_CUCME9.8e-11897.4060S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499552 PE=3 SV=1[more]
tr|A0A0A0L9J7|A0A0A0L9J7_CUCSA4.1e-11695.2460S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1[more]
tr|A0A1S3CFY6|A0A1S3CFY6_CUCME1.6e-11594.8160S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1[more]
tr|A0A2C9VHA3|A0A2C9VHA3_MANES2.3e-10684.4260S ribosomal protein L6 OS=Manihot esculenta OX=3983 GN=MANES_07G002900 PE=3 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR008991Translation_prot_SH3-like_sf
IPR005568Ribosomal_L6_N
IPR014722Rib_L2_dom2
IPR00091560S_ribosomal_L6E
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G010580.1CsaV3_4G010580.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR00091560S ribosomal protein L6EPFAMPF01159Ribosomal_L6ecoord: 124..231
e-value: 8.6E-40
score: 135.5
IPR00091560S ribosomal protein L6EPANTHERPTHR1071560S RIBOSOMAL PROTEIN L6coord: 5..231
IPR00091560S ribosomal protein L6EPROSITEPS01170RIBOSOMAL_L6Ecoord: 125..143
IPR014722Ribosomal protein L2, domain 2GENE3DG3DSA:2.30.30.30coord: 85..169
e-value: 3.2E-14
score: 54.7
IPR005568Ribosomal protein L6, N-terminalPFAMPF03868Ribosomal_L6e_Ncoord: 7..59
e-value: 4.1E-14
score: 52.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..74
NoneNo IPR availableCDDcd13156KOW_RPL6coord: 79..231
e-value: 1.37156E-79
score: 237.446
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILYSSF50104Translation proteins SH3-like domaincoord: 84..173

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G010580CSPI04G10430Wild cucumber (PI 183967)cpicucB213
CsaV3_4G010580Cucsa.038080Cucumber (Gy14) v1cgycucB014
CsaV3_4G010580CsGy4G010120Cucumber (Gy14) v2cgybcucB171
CsaV3_4G010580MELO3C023168Melon (DHL92) v3.5.1cucmeB338
CsaV3_4G010580ClCG04G000280Watermelon (Charleston Gray)cucwcgB322
CsaV3_4G010580Lsi01G018790Bottle gourd (USVL1VR-Ls)cuclsiB281
CsaV3_4G010580MELO3C023168.2Melon (DHL92) v3.6.1cucmedB322
CsaV3_4G010580Cla97C04G068640Watermelon (97103) v2cucwmbB311
CsaV3_4G010580Bhi03G002133Wax gourdcucwgoB399
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G010580Silver-seed gourdcarcucB0220
CsaV3_4G010580Cucurbita maxima (Rimu)cmacucB0801
CsaV3_4G010580Cucurbita moschata (Rifu)cmocucB0786
CsaV3_4G010580Cucurbita pepo (Zucchini)cpecucB0079