CsaV3_4G010030 (gene) Cucumber (Chinese Long) v3

NameCsaV3_4G010030
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 7786776 .. 7787016 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGGGAAAGAGGAAATTAGAGAGGGGAAATGGAAAGAGGAAAATAAAGAGACAAAGGGGAAAGAGGACAATGGACATAGGAATGGAAAAGAGGAAAATGAGAGGAAGGGGAAAGAGGAAGAAGACAACAAGGAGGGACGAATGTTGCAAAAAATTGGGGGTATTACGCGGGTTACGATGGAGTGAAGAGAAGTGTAAAAGGGATTTTGGAAACCCTAAACTAAATTGGACTCTAAATCACA

mRNA sequence

AGGGGAAAGAGGAAATTAGAGAGGGGAAATGGAAAGAGGAAAATAAAGAGACAAAGGGGAAAGAGGACAATGGACATAGGAATGGAAAAGAGGAAAATGAGAGGAAGGGGAAAGAGGAAGAAGACAACAAGGAGGGACGAATGTTGCAAAAAATTGGGGGTATTACGCGGGTTACGATGGAGTGAAGAGAAGTGTAAAAGGGATTTTGGAAACCCTAAACTAAATTGGACTCTAAATCACA

Coding sequence (CDS)

AGGGGAAAGAGGAAATTAGAGAGGGGAAATGGAAAGAGGAAAATAAAGAGACAAAGGGGAAAGAGGACAATGGACATAGGAATGGAAAAGAGGAAAATGAGAGGAAGGGGAAAGAGGAAGAAGACAACAAGGAGGGACGAATGTTGCAAAAAATTGGGGGTATTACGCGGGTTACGATGGAGTGAAGAGAAGTGTAAAAGGGATTTTGGAAACCCTAAACTAAATTGGACTCTAAATCACA

Protein sequence

RGKRKLERGNGKRKIKRQRGKRTMDIGMEKRKMRGRGKRKKTTRRDECCKKLGVLRGLRWSEEKCKRDFGNPKLNWTLNHX
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G010030.1CsaV3_4G010030.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G010030CSPI04G09890Wild cucumber (PI 183967)cpicucB213
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G010030Cucumber (Chinese Long) v3cuccucB031
CsaV3_4G010030Silver-seed gourdcarcucB0739
CsaV3_4G010030Silver-seed gourdcarcucB0859
CsaV3_4G010030Cucumber (Gy14) v2cgybcucB033
CsaV3_4G010030Cucumber (Gy14) v2cgybcucB171
CsaV3_4G010030Cucumber (Gy14) v1cgycucB147
CsaV3_4G010030Cucumber (Gy14) v1cgycucB279
CsaV3_4G010030Cucurbita maxima (Rimu)cmacucB0089
CsaV3_4G010030Cucurbita maxima (Rimu)cmacucB0259
CsaV3_4G010030Cucurbita maxima (Rimu)cmacucB0300
CsaV3_4G010030Cucurbita maxima (Rimu)cmacucB0568
CsaV3_4G010030Cucurbita moschata (Rifu)cmocucB0078
CsaV3_4G010030Cucurbita moschata (Rifu)cmocucB0247
CsaV3_4G010030Cucurbita moschata (Rifu)cmocucB0293
CsaV3_4G010030Cucurbita moschata (Rifu)cmocucB0555
CsaV3_4G010030Cucurbita pepo (Zucchini)cpecucB0461
CsaV3_4G010030Cucurbita pepo (Zucchini)cpecucB0646
CsaV3_4G010030Cucurbita pepo (Zucchini)cpecucB0704
CsaV3_4G010030Cucurbita pepo (Zucchini)cpecucB0769
CsaV3_4G010030Wild cucumber (PI 183967)cpicucB038
CsaV3_4G010030Bottle gourd (USVL1VR-Ls)cuclsiB293
CsaV3_4G010030Bottle gourd (USVL1VR-Ls)cuclsiB332
CsaV3_4G010030Melon (DHL92) v3.5.1cucmeB274
CsaV3_4G010030Melon (DHL92) v3.5.1cucmeB284
CsaV3_4G010030Melon (DHL92) v3.5.1cucmeB318
CsaV3_4G010030Melon (DHL92) v3.6.1cucmedB267
CsaV3_4G010030Melon (DHL92) v3.6.1cucmedB277
CsaV3_4G010030Melon (DHL92) v3.6.1cucmedB310
CsaV3_4G010030Watermelon (Charleston Gray)cucwcgB313
CsaV3_4G010030Watermelon (Charleston Gray)cucwcgB333
CsaV3_4G010030Watermelon (Charleston Gray)cucwcgB346
CsaV3_4G010030Watermelon (97103) v1cucwmB318
CsaV3_4G010030Watermelon (97103) v1cucwmB351
CsaV3_4G010030Watermelon (97103) v1cucwmB374
CsaV3_4G010030Watermelon (97103) v2cucwmbB302
CsaV3_4G010030Watermelon (97103) v2cucwmbB322
CsaV3_4G010030Watermelon (97103) v2cucwmbB332
CsaV3_4G010030Wax gourdcucwgoB374
CsaV3_4G010030Wax gourdcucwgoB420
CsaV3_4G010030Wax gourdcucwgoB435