CsaV3_4G009260 (gene) Cucumber (Chinese Long) v3

NameCsaV3_4G009260
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 6861370 .. 6864104 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTTCTATGCTTGTATACGATTATCGAATAATGGCTTGAGAAAGGAAAACGTTTGTATTCATGATCTTCGATTTAAAAAGGATTGTTTTTTAAACGTGGTGTTGTAAGTATTCTTCATAACTTATGATTATGTTTATGAGATACCTTGTATACTGTGATATTCTGTGACAGGAGTAAGCTATGTGCTAATACTCCCGTGTTATTAGTGGTGTGGTTTGTGTGCTGTGGTGTGGTTGATCTATCGTAAGATGCTGGTGTGAATCCCAGGTAACTCGCGTGATGTTGGATGAGTGTGAATCCCAAGTCTAGGTGAGGGGAGAATCCCTGGTCGAGGCGAGCTGTGATGTGTTCTTGATAATAGACACTGGTGGAAGTCCCAGGTAACTCACATGACGCTAGTTGAGTGTGAATTTTGGGTCTTGGCGAAGGGAGAATCCCAAGTCTAAGCAAGTTGGCGATGAGACGTTGGTGGAGTGTGACTCCCAGGTCTGAGAAAGTGAATGTGACGGGACGCTGATGGAAGTTTCAGGTAACTCGCATGATACTGGTTGAGTGCAAATCCCAGGTCTACGTGAGAGGAGAATCCCATGTCTCAGAGTTGAGCTTGTTTGTGAAATGGTTTAAACATGCGGTGTTTGTGACGCTTGTTGTGATGGCGATTTATTTGATTGTGGTGGTTTGATGTGCTATGATTTATTTGATGCGATTTGACCTTATTATTTGTAATTCTGTGTGCTTTCCTAAAAGGAATTTTAAAACCCCTCATTCACTAAGTCCGTTTGACTTATGTTTTAAGTTTTCTCCTCCTCGAGTTGTTAGACATTGGAGCCATGCGAATGTTGGTTCTGAGGTATTGTAGCTTAGTTAAGGAGGGAAGACAGAGTTACTTTGTAGTCTTACATGGCGTGCTAGCCATGACTTCTCATCATATGCCTTAGGAGCCCGTTGGTAAGAGAGTTTCTCTTTAGCGCGGATGGCTCGACTTAGAAGGAAGGCGAGCACAATACCCAGGTTGGTGAAGCCAAACCCGATGAGCTAGAAAGCAAAAGAGTCGAAGAGTCGAGCCAGGGAAAGGAAGCCCTGATGCTTGTCCTTGAGTTTGATTGGCCGGGCGACCAAGGAGAAGGATGAAACGAAGGCTTCACACCTCTAAGTACCCTGTCTTAAGAAGCAGCATTAGGCGGTGGACAAGGAAAGGATGTCCTTGGGTTGGATTGAAGATGACAAAAAGGAAAAAGGACGGGATCAAATTGATGGTTCATTGATATGGTGAAAGATTTGAATAAGAAATCTGAAGAAGAGTATTTCTATAAGAAAGAAAAAATTGAGTGTGGAAGGGTTGTAACTTCCGAATTCAGAACCAAAAGTGGGTGGATTCTGAGATGCATTTCATGGCCTAGTACTGGAGGGAGATCTTTTATTAGAATACCTATTGGTGAAGATAAACAGGAGTGGAAAAGATTTGGAAAAATGTTGGAAGACTTCAAGGACATTCTTGAATACAAAATCTGGTTCTCCTTCCAAACTAAGTTCAACACCATTATGAAGCAGCCAACTAATAGTATGAAATGAAGCTTTACGAAGAAAGCAGAATCAAATGAGACTTCCAAGATCTCCTTCTCCGATATTGCATCACAGAGTTCAAGCAAATTTTGGGTGATTAAGAATTCAGAAGTCTTCAAAGCAGATTTTGATAATCTTTGGGTTGTTTCAAAACTTTTTGAATTTGATAGTTGGGTAAAAATTAATGAAGCATTAGAACTCTTTTTCGATTCAAAAGTTATCATCAACCCTTTATTTGCAGACAATGCTTTGATTGAATTGGAACGTGGTCCTTTGAAGGAGTTCATTGAAAGTCGAGGCAAATGGCAATGTTTTGGTGCCTTTCATTTAAAGTTTGAAAAGTGGAATAATCTCATCCATGGAAGACCACTATATTTGAAAGGCTATGGAGGGTGGATTTCAATAAAAAATTTACCTCTTGATTATTGGTGTAATAAAACTTTTGAAGTGATTGGAGCTCATTTTGGAGGATTAGAAAATATTGCAGCTGAAACTATCAACTTCCTTGATGTCTCAGAAGCCAAGATTCAAGTGAAGGAGAATAAGTGTGGTTTCATTCCCGCAACTATTGAGATTTCTGATGAAAGAAGAGGAAACATTTTTTTGAATTTTGGGGATATTTCTGTTTTTAATCTACCCAGCAAAGTACAAGGTAATTTTTCTACTTATGAATTTTCTAATCCAGTAGATATTGTCAGAATAAATCAAGTCATGAAGAATGAAGGTTTTGAGGAAGTTTCGATTAGCTCCAATTTTGAATTAATTCTTCCTGCGAACTCCATCCCAAGCACGCAAAGGAACCCTCATAAGTTGTCTGAAAGGTTGCTCAATCACCTTCATCAGAGGTCGACATCAACTCACCGGAAATGCAAAGCATCATCAGATTCTGGGAAGTCTCCTCCTCATCCTCCGGTTATTGGCAGTTCCGTCGGTAATCAGATAGCAGAAATCAAATGGAAGTCAGAGAATTTCAAAAGACGTTCAAAATCAGAATCACCATTTAGGAGAGCCTTAGTTTTCCCGCCAAAGGAGACATCTTTTAATTGTATTCCATTTGAAAAGTCACTCGAAGGATTCCAACAGTCACATATTTGCAGCATTAAAGATAATATTAATGTTGTTTCTAGAAACAAGAGTGCCAAAAAGTCATTAATCATCACGAAGGCCAAT

mRNA sequence

ATGGTGAAAGATTTGAATAAGAAATCTGAAGAAGAGTATTTCTATAAGAAAGAAAAAATTGAGTGTGGAAGGGTTGTAACTTCCGAATTCAGAACCAAAAGTGGGTGGATTCTGAGATGCATTTCATGGCCTAGTACTGGAGGGAGATCTTTTATTAGAATACCTATTGGTGAAGATAAACAGGAGTGGAAAAGATTTGGAAAAATGTTGGAAGACTTCAAGGACATTCTTGAATACAAAATCTGGTTCTCCTTCCAAACTAAGTTCAACACCATTATGAAGCAGCCAACTAATATAGATATTGTCAGAATAAATCAAGTCATGAAGAATGAAGGTTTTGAGGAAGTTTCGATTAGCTCCAATTTTGAATTAATTCTTCCTGCGAACTCCATCCCAAGCACGCAAAGGAACCCTCATAAGTTGTCTGAAAGGTTGCTCAATCACCTTCATCAGAGGTCGACATCAACTCACCGGAAATGCAAAGCATCATCAGATTCTGGGAAGTCTCCTCCTCATCCTCCGGTTATTGGCAGTTCCGTCGGTAATCAGATAGCAGAAATCAAATGGAAGTCAGAGAATTTCAAAAGACGTTCAAAATCAGAATCACCATTTAGGAGAGCCTTAGTTTTCCCGCCAAAGGAGACATCTTTTAATTGTATTCCATTTGAAAAGTCACTCGAAGGATTCCAACAGTCACATATTTGCAGCATTAAAGATAATATTAATGTTGTTTCTAGAAACAAGAGTGCCAAAAAGTCATTAATCATCACGAAGGCCAAT

Coding sequence (CDS)

ATGGTGAAAGATTTGAATAAGAAATCTGAAGAAGAGTATTTCTATAAGAAAGAAAAAATTGAGTGTGGAAGGGTTGTAACTTCCGAATTCAGAACCAAAAGTGGGTGGATTCTGAGATGCATTTCATGGCCTAGTACTGGAGGGAGATCTTTTATTAGAATACCTATTGGTGAAGATAAACAGGAGTGGAAAAGATTTGGAAAAATGTTGGAAGACTTCAAGGACATTCTTGAATACAAAATCTGGTTCTCCTTCCAAACTAAGTTCAACACCATTATGAAGCAGCCAACTAATATAGATATTGTCAGAATAAATCAAGTCATGAAGAATGAAGGTTTTGAGGAAGTTTCGATTAGCTCCAATTTTGAATTAATTCTTCCTGCGAACTCCATCCCAAGCACGCAAAGGAACCCTCATAAGTTGTCTGAAAGGTTGCTCAATCACCTTCATCAGAGGTCGACATCAACTCACCGGAAATGCAAAGCATCATCAGATTCTGGGAAGTCTCCTCCTCATCCTCCGGTTATTGGCAGTTCCGTCGGTAATCAGATAGCAGAAATCAAATGGAAGTCAGAGAATTTCAAAAGACGTTCAAAATCAGAATCACCATTTAGGAGAGCCTTAGTTTTCCCGCCAAAGGAGACATCTTTTAATTGTATTCCATTTGAAAAGTCACTCGAAGGATTCCAACAGTCACATATTTGCAGCATTAAAGATAATATTAATGTTGTTTCTAGAAACAAGAGTGCCAAAAAGTCATTAATCATCACGAAGGCCAAT

Protein sequence

MVKDLNKKSEEEYFYKKEKIECGRVVTSEFRTKSGWILRCISWPSTGGRSFIRIPIGEDKQEWKRFGKMLEDFKDILEYKIWFSFQTKFNTIMKQPTNIDIVRINQVMKNEGFEEVSISSNFELILPANSIPSTQRNPHKLSERLLNHLHQRSTSTHRKCKASSDSGKSPPHPPVIGSSVGNQIAEIKWKSENFKRRSKSESPFRRALVFPPKETSFNCIPFEKSLEGFQQSHICSIKDNINVVSRNKSAKKSLIITKAN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G009260.1CsaV3_4G009260.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..177

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G009260Cucumber (Gy14) v2cgybcucB171
CsaV3_4G009260Cucumber (Gy14) v1cgycucB604
CsaV3_4G009260Bottle gourd (USVL1VR-Ls)cuclsiB328
CsaV3_4G009260Wild cucumber (PI 183967)cpicucB213
CsaV3_4G009260Melon (DHL92) v3.5.1cucmeB304
CsaV3_4G009260Melon (DHL92) v3.5.1cucmeB320
CsaV3_4G009260Melon (DHL92) v3.6.1cucmedB296
CsaV3_4G009260Melon (DHL92) v3.6.1cucmedB313