CsaV3_4G008920 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTGGTGGTTTCACCGAACTTCAAGCATAATGCGAACAAACACTGGTCCACGAGCAAACCACAGAGAGTTGATAAAGCAGAGCTAAGAGATTTTCTTCGTTGATCATTTTGTAGAGAGAAAAATAAGGGGTTTTTTTCAAGTTTTTATGCTGCATAATCCATGGCTGAGAGGAGGTGAGAGGAGGATGATCGTGTGGGAGGCAAAGAGAATCTGAATGTTAATGGAGAATAAGCTGAGTTCAGGATTGAGGATTTTGCTGGAAATCAATTGATTGATTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTACTTGAACCCAGTAATGGGTAAGCAACAATCCTTGCGCAGCAAAGCAGTCCATTTTGTCTCCGATATCACTACCGTTCTTCTTAACCCAATCTCTGATAAACCTTCCGCTACAGCCTCTGCTCATCCTCAACATCATCATTCACCTGTGAGTTTGTCTCTCTTAAGTTGTTATACCTTTTCGATCCTTTTTCTGTTTGCTTTGTTATGCTTTGTTTATTCTCCGGCTGTTGCGCTTTGGAAGTTTTACGTTTTTCTTCAGGATATCTTTTATGGACTGGATCACTCCGATTTCATTTCGTTTGACTTCAATCGTTGGTTGTAGTATCCGGTTTTTGAACTAATTGTGACTAATTTTGGTTGGTGAACCATTAGACCCTTTTGTTTGTCTTAATCGTTAATCTTTATGCATAATTTTAGGGTAGAACGTAGAAGGTTAGATTCCTTCTGTTCCAATTGATAGGGGATTTCAAAGAACTACTAAATATGCACGCATTTTTCTTGTAATCAAAATTTTCTTCCTAGAAATGTTTGTTAATGGGACTTAACTTGCGTGTGATATCTCTCTGAAACTTGGCAGCCATGTCTAATCTTTAATTGGGTGCCTTTGTTCTTCTAGGAAAATGCGACTGACCTTAAAGACGACAGTGATCTAGGTTCAGCTAGTGAACAGGGTTCCGAATTTTCGGAAGATGGCCCTGATACATCTTCATTTACTGCATTCCTGTATTCCCTTCTGTCGTCCTCAGAATTGCAGGAAAACTTGAACTCTGATGAAAGAAGTGATAATCAGGCAGAGGCAGGCACACCAATGATCAATGCTGCAAAAGAAACTGTTATGAAGAAAAGCTTGTTTTCTAGGGGGAAACAATCCCTTGGTAGAGCTTTTCACCATGCTGCAAGAATCACTGGCTACCGAAATCAGGATCGGAAGAGTGATGTTGATTTGAAAGTTAATGATTCTAAATTTTCTGGAATTGAGATGATGGAAAAGACAAATGTAAGTGAGGTTCCTTCGTCAGTTGTTGTCCCTGACGCATCTGAACCTTCAGTGCTTCTTTCAGAAAAAGCTAGAACTGTTCTTTATGCCTCCCTTCCAGCTCTTGTCCAGGGAAGGAAATGGCTTTTGCTATACAGGTGAAGACCTTCGGTATTTTGTTTTATGATTACGTTTTAAGAAATTCTCATAGGATTTCAGTTATTTATACTCTATCATATGTTTCTTAAGTATATATTCCGGGTGTGCAATGCAGTACGTGGAGGCATGGGATATCTCTTTCAACTCTATATAGGAGAAGTATGCTGTGGTCTGGATTCAGTTTGCTGGTAACCATAAGTTTGATTTTTCTATGGACAAGTTTGTTTTGACATGTATTCATCTTTGACCATGTCTGTTGAATGAATGTAGCAAAGAGTTATTTTCCTCTAAATTAGAATGGAGGGTTGAATTCTCAATTCGAGTATAGCTTTATGTCTAAGACACCAATTACCATCGCGAAGGTTGATGATTTGATCCCTCACACGTGCAATCTCTGAACTTAAATATAAGAAAAAAAACGTAGGGTTGAACTATTTCACTGATTGGGCATCTATGACATGTACACATTGAGGATTCCACTACTGATGCATATAAATATTACATACAAGATACATGTGCAGTTTATGTCATACAATGTGTCACTTCTGCATAATTTACTTCCAGGTTGTTGGTGATCAGAAGGGTGCTGTATTTGGTGGCTTGGTGGAGGCACCGTTAAAACCGAGCAGCAAGAAAAAGTATCAGGTGCTTATAACATGCCTCTACTCTTTACATTAGCCTATTGAGGAAATATGTGCAATTGGCCCCTATTAATCGTGAATCTTGAACAGGGAACCAATAATACTTTTGTTTTCACAAGTATTCCTGGCCATCCTGTGATTTATCGCCCCACAGGTACTTACAATTCTTGTTGAGTTTATTCACCACAAGTCTCTCCATACCAATCTTTTGCTTGTTTGTGAATTGACATCGTTTTACTAGTAACCAGAGGTTCGGCTCATTGCCAACCATGCAAGTTTATTATGAACTTGGGTTAAACATTGGTTGGAATATAATGTAAATTCAACTTGACACTATCACTGAGCTTATGAAAATAAATGCCGAAAAATGAAAATACGATATTGTTTATTTAGTAAACCATGATGAGATGACCTAGTGGTAAAAAGGAGACACAGTCTAAATAAATGGCTAAGAGGTCAAGGGTTCGATCCATGGTGACCATCTATTTAAGAATTAAGGTCGTCCAATCACTAACAAATGTTAAAAGAAAGACCGATCATTTAGTACCAATAATATCTTGCTATGCATTCCGTTTCTCTGTCCGCTTTTGAGATGAACTACAATTCTTCTAGGAAATGGGGCAAATTATGGTCTAAATAAATGGCTAAGAGGTCAAGTGTTTGATCCATAGTGGCCATCTATTTAAGAATTAAGGTCGTCCAATCACTAACAAATGTTAAAAGGAAGTCCGATCATTTAGTAGCAATAATATCTTGCTATGCATTCCGTTTATCTATCCGCTCTTGAGATGAACTACAATTCTTCTAAGAAATGGGGCAAATTATGGTTTTATACCATTTCATGGGCCATATTCTTTCTGTGGATAATGCAGCATTGCGATTTCTTTATCTCCCGTACATTGGAAACTTTGGGAGATTTTCTTTTGCTTCCTTTTTTTTCCTTTTTCTCCTCTCGTCTAAGAACTAGTCTGCATTTTCTCCCAATTTAGGTGTTATTGTTATTTGTTTTCAAATTATGAATTTAACTGTTTTTAAGTAAATATTCCACGTATAAAGAGAGACAAGGTAATTGCATGACCTTGAATCTTTTCAGGGTCCTACTCTAAGATTGCTGATAATCGTTGATGAGTACTGCCTTAAAGTTTAATTTCGTACATGGTTTTATATCCAGTAGTCTCATGTAGGGAAATTTTGAACTGATTCAACCAGGTGAAAATTACTATTTCACATTGTGCTCGCCTGATTTCTTGGCCATTGGCGGCGGTAGCCATTTTGCACTCTATTTGGACAATGACCTGTGAGAGCACTCCCTTTTAATAGTCTGTGTGATGCGAACACACATATAACATCAATTATCTTAAGTAAACATGCAACTTGATTCTATACTTACAAATGTGTTCTTGAATTTAAGATTAAATGGATCGAGCTCTACATCAGAGACATACGGAAATCCTTGTCTTGCAAATACTGAAGAATTTGAAGTGAAGGAAGTTGAGGTGATTGTTGAACATCACAGTTTGCTCACATGGAAAATACATATGTGGTATTTAAGTAACCTACTATTGATTCTAAAATCAGCTGTATACATTGTGTATGTGATGCAGTTGTGGGGCTTTGTATACACCTCAAAGTATGAAGAAATGCTTGCTTTGAGCAGAACCGAAGCACCTGGGATTTGTCGATGGTGATCGATTTTTAAATACAACCCAAACTGCAACTTTACTGAACGAAATGATATCCTGTGGAGATCTCATGACCGTCTTGACATGATTATACGATGGGGAAGGCAGATGAACTAATTAGAAAGATGAGAAGGTTGAATGTGAATGCCTTCTCCATGCCTGTATATTTAATTAACTTTTGTACATATAAAAATGTGAGTTGTTTCATCTTTGTGAATTAAGTAATATGGATTTCTACGTTTGAAATTGATTAAGGCAATGAAATGAATTTCAAGGTTATGTTTTATGCTTCTTTTATGGGAAAGTCATTTATCAAAATGAAATATGTTGAAGAAATCTTCACTCACTAGACATTTTGTCTAATTCTTTAAATGTTTTGTTTTCTTTGCCACTAGGTAATGGAGGACATTGAGAGTGACTTGTCGTCTTGATCTCCTGTTGTGCCTTATTGGGTCGCATCTTCTTGTTAGTAATCACCAGTCTGGTCGCCATAGCATGTAGCTTTGTTAGGTGAAGAAAGAAACTTTTGTAATTCAGTTATTTGTACATAAGCTTTTAGTGCTTGCATTTCACACTAACATTTTGTAAACTCCTCTACATGTTAATGAAGTATTCTCTTTTTTAAGTTTTTTGGTTTAAATGTTTGATGTGTTATGAATTAGTCATCTAAGTACGTTGCATGACTTGTAATGGAATTGATCTATGCAGTGTAATCCTTAGGCGATGTAGCCTTCGGTTG ATGGGTAAGCAACAATCCTTGCGCAGCAAAGCAGTCCATTTTGTCTCCGATATCACTACCGTTCTTCTTAACCCAATCTCTGATAAACCTTCCGCTACAGCCTCTGCTCATCCTCAACATCATCATTCACCTGAAAATGCGACTGACCTTAAAGACGACAGTGATCTAGGTTCAGCTAGTGAACAGGGTTCCGAATTTTCGGAAGATGGCCCTGATACATCTTCATTTACTGCATTCCTGTATTCCCTTCTGTCGTCCTCAGAATTGCAGGAAAACTTGAACTCTGATGAAAGAAGTGATAATCAGGCAGAGGCAGGCACACCAATGATCAATGCTGCAAAAGAAACTGTTATGAAGAAAAGCTTGTTTTCTAGGGGGAAACAATCCCTTGGTAGAGCTTTTCACCATGCTGCAAGAATCACTGGCTACCGAAATCAGGATCGGAAGAGTGATGTTGATTTGAAAGTTAATGATTCTAAATTTTCTGGAATTGAGATGATGGAAAAGACAAATGTAAGTGAGGTTCCTTCGTCAGTTGTTGTCCCTGACGCATCTGAACCTTCAGTGCTTCTTTCAGAAAAAGCTAGAACTGTTCTTTATGCCTCCCTTCCAGCTCTTGTCCAGGGAAGGAAATGGCTTTTGCTATACAGTACGTGGAGGCATGGGATATCTCTTTCAACTCTATATAGGAGAAGTATGCTGTGGTCTGGATTCAGTTTGCTGGTTGTTGGTGATCAGAAGGGTGCTGTATTTGGTGGCTTGGTGGAGGCACCGTTAAAACCGAGCAGCAAGAAAAAGTATCAGGGAACCAATAATACTTTTGTTTTCACAAGTATTCCTGGCCATCCTGTGATTTATCGCCCCACAGGTGAAAATTACTATTTCACATTGTGCTCGCCTGATTTCTTGGCCATTGGCGGCGGTAGCCATTTTGCACTCTATTTGGACAATGACCTATTAAATGGATCGAGCTCTACATCAGAGACATACGGAAATCCTTGTCTTGCAAATACTGAAGAATTTGAAGTGAAGGAAGTTGAGTTGTGGGGCTTTGTATACACCTCAAAGTATGAAGAAATGCTTGCTTTGAGCAGAACCGAAGCACCTGGGATTTGTCGATGGTGA ATGGGTAAGCAACAATCCTTGCGCAGCAAAGCAGTCCATTTTGTCTCCGATATCACTACCGTTCTTCTTAACCCAATCTCTGATAAACCTTCCGCTACAGCCTCTGCTCATCCTCAACATCATCATTCACCTGAAAATGCGACTGACCTTAAAGACGACAGTGATCTAGGTTCAGCTAGTGAACAGGGTTCCGAATTTTCGGAAGATGGCCCTGATACATCTTCATTTACTGCATTCCTGTATTCCCTTCTGTCGTCCTCAGAATTGCAGGAAAACTTGAACTCTGATGAAAGAAGTGATAATCAGGCAGAGGCAGGCACACCAATGATCAATGCTGCAAAAGAAACTGTTATGAAGAAAAGCTTGTTTTCTAGGGGGAAACAATCCCTTGGTAGAGCTTTTCACCATGCTGCAAGAATCACTGGCTACCGAAATCAGGATCGGAAGAGTGATGTTGATTTGAAAGTTAATGATTCTAAATTTTCTGGAATTGAGATGATGGAAAAGACAAATGTAAGTGAGGTTCCTTCGTCAGTTGTTGTCCCTGACGCATCTGAACCTTCAGTGCTTCTTTCAGAAAAAGCTAGAACTGTTCTTTATGCCTCCCTTCCAGCTCTTGTCCAGGGAAGGAAATGGCTTTTGCTATACAGTACGTGGAGGCATGGGATATCTCTTTCAACTCTATATAGGAGAAGTATGCTGTGGTCTGGATTCAGTTTGCTGGTTGTTGGTGATCAGAAGGGTGCTGTATTTGGTGGCTTGGTGGAGGCACCGTTAAAACCGAGCAGCAAGAAAAAGTATCAGGGAACCAATAATACTTTTGTTTTCACAAGTATTCCTGGCCATCCTGTGATTTATCGCCCCACAGGTGAAAATTACTATTTCACATTGTGCTCGCCTGATTTCTTGGCCATTGGCGGCGGTAGCCATTTTGCACTCTATTTGGACAATGACCTATTAAATGGATCGAGCTCTACATCAGAGACATACGGAAATCCTTGTCTTGCAAATACTGAAGAATTTGAAGTGAAGGAAGTTGAGTTGTGGGGCTTTGTATACACCTCAAAGTATGAAGAAATGCTTGCTTTGAGCAGAACCGAAGCACCTGGGATTTGTCGATGGTGA MGKQQSLRSKAVHFVSDITTVLLNPISDKPSATASAHPQHHHSPENATDLKDDSDLGSASEQGSEFSEDGPDTSSFTAFLYSLLSSSELQENLNSDERSDNQAEAGTPMINAAKETVMKKSLFSRGKQSLGRAFHHAARITGYRNQDRKSDVDLKVNDSKFSGIEMMEKTNVSEVPSSVVVPDASEPSVLLSEKARTVLYASLPALVQGRKWLLLYSTWRHGISLSTLYRRSMLWSGFSLLVVGDQKGAVFGGLVEAPLKPSSKKKYQGTNNTFVFTSIPGHPVIYRPTGENYYFTLCSPDFLAIGGGSHFALYLDNDLLNGSSSTSETYGNPCLANTEEFEVKEVELWGFVYTSKYEEMLALSRTEAPGICRW
BLAST of CsaV3_4G008920 vs. NCBI nr
Match: XP_004137188.1 (PREDICTED: oxidation resistance protein 1 [Cucumis sativus]) HSP 1 Score: 736.9 bits (1901), Expect = 3.5e-209 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. NCBI nr
Match: XP_022984482.1 (TLD domain-containing protein 2 [Cucurbita maxima] >XP_022984483.1 TLD domain-containing protein 2 [Cucurbita maxima]) HSP 1 Score: 665.6 bits (1716), Expect = 9.8e-188 Identity = 342/376 (90.96%), Postives = 359/376 (95.48%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. NCBI nr
Match: XP_022136824.1 (TLD domain-containing protein 2 [Momordica charantia]) HSP 1 Score: 619.8 bits (1597), Expect = 6.2e-174 Identity = 317/373 (84.99%), Postives = 341/373 (91.42%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. NCBI nr
Match: XP_022929355.1 (oxidation resistance protein 1 [Cucurbita moschata]) HSP 1 Score: 594.0 bits (1530), Expect = 3.6e-166 Identity = 316/377 (83.82%), Postives = 326/377 (86.47%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. NCBI nr
Match: XP_023552771.1 (oxidation resistance protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 594.0 bits (1530), Expect = 3.6e-166 Identity = 316/377 (83.82%), Postives = 327/377 (86.74%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. TAIR10
Match: AT4G39870.1 (TLD-domain containing nucleolar protein) HSP 1 Score: 325.1 bits (832), Expect = 5.7e-89 Identity = 196/399 (49.12%), Postives = 243/399 (60.90%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. TAIR10
Match: AT2G05590.2 (TLD-domain containing nucleolar protein) HSP 1 Score: 203.0 bits (515), Expect = 3.3e-52 Identity = 99/175 (56.57%), Postives = 129/175 (73.71%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. Swiss-Prot
Match: sp|A8KBE0|OXR1_XENTR (Oxidation resistance protein 1 OS=Xenopus tropicalis OX=8364 GN=oxr1 PE=2 SV=2) HSP 1 Score: 118.6 bits (296), Expect = 1.5e-25 Identity = 71/171 (41.52%), Postives = 95/171 (55.56%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. Swiss-Prot
Match: sp|B4F6Q9|OXR1_XENLA (Oxidation resistance protein 1 OS=Xenopus laevis OX=8355 GN=oxr1 PE=2 SV=2) HSP 1 Score: 117.9 bits (294), Expect = 2.5e-25 Identity = 70/171 (40.94%), Postives = 95/171 (55.56%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. Swiss-Prot
Match: sp|Q8N573|OXR1_HUMAN (Oxidation resistance protein 1 OS=Homo sapiens OX=9606 GN=OXR1 PE=1 SV=2) HSP 1 Score: 117.5 bits (293), Expect = 3.3e-25 Identity = 72/180 (40.00%), Postives = 98/180 (54.44%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. Swiss-Prot
Match: sp|Q4KMM3|OXR1_MOUSE (Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=3) HSP 1 Score: 116.7 bits (291), Expect = 5.6e-25 Identity = 70/171 (40.94%), Postives = 93/171 (54.39%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. Swiss-Prot
Match: sp|Q4V8B0|OXR1_RAT (Oxidation resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Oxr1 PE=1 SV=3) HSP 1 Score: 116.7 bits (291), Expect = 5.6e-25 Identity = 70/171 (40.94%), Postives = 93/171 (54.39%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. TrEMBL
Match: tr|A0A1S3C2K0|A0A1S3C2K0_CUCME (oxidation resistance protein 1 OS=Cucumis melo OX=3656 GN=LOC103495741 PE=4 SV=1) HSP 1 Score: 580.9 bits (1496), Expect = 2.1e-162 Identity = 307/374 (82.09%), Postives = 311/374 (83.16%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. TrEMBL
Match: tr|A0A067LEN3|A0A067LEN3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24046 PE=4 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 4.6e-133 Identity = 260/380 (68.42%), Postives = 301/380 (79.21%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. TrEMBL
Match: tr|A0A2C9UWH1|A0A2C9UWH1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G135100 PE=4 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 3.9e-132 Identity = 256/381 (67.19%), Postives = 296/381 (77.69%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. TrEMBL
Match: tr|A0A2I4FS50|A0A2I4FS50_9ROSI (uncharacterized protein LOC109001577 OS=Juglans regia OX=51240 GN=LOC109001577 PE=4 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 8.6e-132 Identity = 255/372 (68.55%), Postives = 289/372 (77.69%), Query Frame = 0
BLAST of CsaV3_4G008920 vs. TrEMBL
Match: tr|B9SZ36|B9SZ36_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0212730 PE=4 SV=1) HSP 1 Score: 478.0 bits (1229), Expect = 1.9e-131 Identity = 253/378 (66.93%), Postives = 296/378 (78.31%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|