CsaV3_4G007690 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCGATCTCCAAATGGCTGAAGAACGGAAGTGCAGTATTCTTTTTTCTATTTTCCCAAGCTGTGTTTCGCTGCTATCACTCACAGTCTGCTAATTCGTCAAATTGCAACCAAAATATAAAAACATAGGGCTGGGCTCAAATGAAATAAGCCCAGCATATGCTTGGTTTCCATTTTTGTTTTGTCCTTCCGCACTTATTCATTTACCCATATCCTCTCTCTTACTCAAATCTCGTTTACTCAATTTTCTTTCCATTTGAGTAACGATGGGAGAGGAAGTGAAGCTATTAGATTTCTGGCCCAGCATGTTCGGGATGAGAGTTAAAATAGCTCTGGCAGAGAAGGGTGTGGCGTATGAGTATGTGGAACAAGACCTGAGAAATAAGAGTCCTTTGCTTCTTCAAATGAACCCAATTCACAAGCAGATCCCAGTTCTTATCCATAATGGAAAACCCATTTGTAAATCTTCCATTATTGTTGAGTACATTGATGAATTTTGGAAGGATAAAGCTTCTCTGTTGCCGTCCGATCCTTATGAAAGAGCTCAGGCCAGATTTTGGGTGGATTTCATCGATAAGAAGGTGAGCATTTGTTTTCTTCCTCCCTTTTGAACTACTCAATTTCTTTTGTTCATATTCCTTAACATTCATCTCTCATCTTAATTGGTTTTAATTTGGGAGAAAAACTGCATACTCTTAGAATATATGCATTGCATGAAGTAATTAGTTAGAAAAAAAAATCCTAAGTATAGAATATTCTTCTAAGTAATGGCATAAAAAGTCATAAATAAAGTCCAAAAGTAATGCCATAAATGACAAACTATTAAACATATAACAAGTCAATATAGAGTTGCGTTAGGTTTATTAAATTTATCTGAAAGATGTCTCAAAACGATTCTATAAAAAACCCCTCATCCCCTCTCTAGAGCTTCATCAGAAAACAAAACAGATGATAAACCCTAAAGTCCTCCATTGTTGTTTTGTTTGAAGCTTAACTAAAGCTTTTTGAAATTTAGGTATAATAATTACACCATAATGAGCAAGTTAGAGGAGTTGGTTTCGTTAGACTTGTGGCTGAGCCCTTTTGCAATAAGAGAGTGAGGTCGGCTTTGGCAGAGAAAGGCCTAAAATATGAAGCAAAAGAGGAAGATTTGAGCAACAAAAGCCCTTTGCTTTTTAGAAATGAATCCTATTTACAAGCAAATCCCTGTTTTGATACACAAAGGGAAACCCATTGTTGATTCTTCTCTCATTGTTGAATATATTGATGAGGTTTGGAGTAGTGACGATGACAAAACGTATACTAATTTGCTTCCTTCTCATCCTCTTGAGAGAGCCCATGCTAGGTTCTAGGTTGACTATGTGGACAAAAAGGTACTCTTGTTTCTATTCTCTTTTTTCTTTAAGTTTATAAATTATTAGTAGATCAATTCTATTATACGTGGGAACATATACTTGGAAATCTCAATGTATTCCCATTTGAACATTCATTTTAATTCAAAAAGAAAAGTATAAAAGTATAAACTTGTAATTTTTTTACAAATACTTGGGAGATGGAGCATTATTATTGTTTTAACCGGTCATAATTTGACGATACATGTAACTACGTTTTTTCAAAGAATTGAAAGTATAAAAGATCTATCGGTGATATTTCTATCGTTGGTGAACACTTATTTGTCGTTAGATTCTTAAATATGGTGATATGATTTATATCTGTGTTGTGTTATATATGTTAATACATTAGTTCTAATTGCTAATATTTAAAATTCTCTTTTTCTATCCATATAAAATTTGTTGAACAAACCTAACTTAATTGTTTAATAATATATAGATAGATATATTGAGGGTATGGATATTTAAATCTTCCAACGTAGAATGAGCTAATAATACATATATGCATCATATATTGCCTTTTTTTCTTTTTAGTTGTGACTCATATTTCTACGAGTTTATGGTAATTATAACGTTAATTATGATAAAGTTATGGCTCTTATGACATTAGATTTATCCCATTGGAAGTAAGCTATGGAATAGACATAAAACAGAAGAGGAGAAAGAAGCAGCAGCAAAGGAATTGTTGGAGTGCTTTAAGCAGCTACAAGAAGAGCTTGGAGATAAAGACTTATTTTGGTGGCAAAACATTTGGGTTTATAGATATTGCTCTCATTCCATTTTACAGCATGTTTCTTGCATTCAAATTGCTTGGAAAATTGGACTTAGAAGTTGAATGTCCCAAGATCCTCCAATGGGTTCAAAGGTGCCTCCAAAGAGAAAGTGTTTCAAAGAATATGCCTACTCAAGAAGAAATTTACGATATCGCATTAGAATTTCTAGGAGTTAATTAAACATTAAGTTAGTTTTTATTTCAAAGATCGAATACGTACTCCATGAGTTAGTGCTAGTTAAGTTATTACAACTTTGATAAAATTGTGTTTTGATTGCTTCCTAAAGAATAAAATAAAATTTTGTGTGTGGGAAAATCAAATGGTCAAAAGGAGAAGTTTTTGAAGACAAAAGTGTGATGTTAAAAGGAGGTGTCATTAATTGAAGTTTTGTCCCCCAGTACGGTGCCGTATTACCACTGTCAACTCTTTTGTCCACATTTCTGTTGCTCCAATAAATGCC ATGGGAGAGGAAGTGAAGCTATTAGATTTCTGGCCCAGCATGTTCGGGATGAGAGTTAAAATAGCTCTGGCAGAGAAGGGTGTGGCGTATGAGTATGTGGAACAAGACCTGAGAAATAAGAGTCCTTTGCTTCTTCAAATGAACCCAATTCACAAGCAGATCCCAGTTCTTATCCATAATGGAAAACCCATTTGTAAATCTTCCATTATTGTTGAGTACATTGATGAATTTTGGAAGGATAAAGCTTCTCTGTTGCCGTCCGATCCTTATGAAAGAGCTCAGGCCAGATTTTGGGTGGATTTCATCGATAAGAAGATTTATCCCATTGGAAGTAAGCTATGGAATAGACATAAAACAGAAGAGGAGAAAGAAGCAGCAGCAAAGGAATTGTTGGAGTGCTTTAAGCAGCTACAAGAAGAGCTTGGAGATAAAGACTTATTTTGGTGGCAAAACATTTGGGTTTATAGATATTGCTCTCATTCCATTTTACAGCATGTTTCTTGCATTCAAATTGCTTGGAAAATTGGACTTAGAAGTTGA ATGGGAGAGGAAGTGAAGCTATTAGATTTCTGGCCCAGCATGTTCGGGATGAGAGTTAAAATAGCTCTGGCAGAGAAGGGTGTGGCGTATGAGTATGTGGAACAAGACCTGAGAAATAAGAGTCCTTTGCTTCTTCAAATGAACCCAATTCACAAGCAGATCCCAGTTCTTATCCATAATGGAAAACCCATTTGTAAATCTTCCATTATTGTTGAGTACATTGATGAATTTTGGAAGGATAAAGCTTCTCTGTTGCCGTCCGATCCTTATGAAAGAGCTCAGGCCAGATTTTGGGTGGATTTCATCGATAAGAAGATTTATCCCATTGGAAGTAAGCTATGGAATAGACATAAAACAGAAGAGGAGAAAGAAGCAGCAGCAAAGGAATTGTTGGAGTGCTTTAAGCAGCTACAAGAAGAGCTTGGAGATAAAGACTTATTTTGGTGGCAAAACATTTGGGTTTATAGATATTGCTCTCATTCCATTTTACAGCATGTTTCTTGCATTCAAATTGCTTGGAAAATTGGACTTAGAAGTTGA MGEEVKLLDFWPSMFGMRVKIALAEKGVAYEYVEQDLRNKSPLLLQMNPIHKQIPVLIHNGKPICKSSIIVEYIDEFWKDKASLLPSDPYERAQARFWVDFIDKKIYPIGSKLWNRHKTEEEKEAAAKELLECFKQLQEELGDKDLFWWQNIWVYRYCSHSILQHVSCIQIAWKIGLRS
BLAST of CsaV3_4G007690 vs. NCBI nr
Match: KGN53528.1 (hypothetical protein Csa_4G064110 [Cucumis sativus]) HSP 1 Score: 380.2 bits (975), Expect = 4.0e-102 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. NCBI nr
Match: XP_008451814.1 (PREDICTED: probable glutathione S-transferase [Cucumis melo]) HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61 Identity = 120/147 (81.63%), Postives = 129/147 (87.76%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. NCBI nr
Match: XP_022931331.1 (probable glutathione S-transferase [Cucurbita moschata]) HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57 Identity = 110/147 (74.83%), Postives = 125/147 (85.03%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. NCBI nr
Match: XP_022984351.1 (probable glutathione S-transferase parC [Cucurbita maxima]) HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57 Identity = 110/147 (74.83%), Postives = 126/147 (85.71%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. NCBI nr
Match: XP_008451810.1 (PREDICTED: probable glutathione S-transferase parC isoform X1 [Cucumis melo]) HSP 1 Score: 230.3 bits (586), Expect = 5.1e-57 Identity = 110/154 (71.43%), Postives = 129/154 (83.77%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. TAIR10
Match: AT1G78340.1 (glutathione S-transferase TAU 22) HSP 1 Score: 198.7 bits (504), Expect = 3.0e-51 Identity = 92/147 (62.59%), Postives = 114/147 (77.55%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. TAIR10
Match: AT1G78380.1 (glutathione S-transferase TAU 19) HSP 1 Score: 198.4 bits (503), Expect = 3.9e-51 Identity = 97/147 (65.99%), Postives = 111/147 (75.51%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. TAIR10
Match: AT1G17180.1 (glutathione S-transferase TAU 25) HSP 1 Score: 196.1 bits (497), Expect = 1.9e-50 Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. TAIR10
Match: AT1G17190.1 (glutathione S-transferase tau 26) HSP 1 Score: 189.9 bits (481), Expect = 1.4e-48 Identity = 95/174 (54.60%), Postives = 122/174 (70.11%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. TAIR10
Match: AT1G78320.1 (glutathione S-transferase TAU 23) HSP 1 Score: 189.9 bits (481), Expect = 1.4e-48 Identity = 93/147 (63.27%), Postives = 110/147 (74.83%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. Swiss-Prot
Match: sp|Q03666|GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 1.9e-55 Identity = 105/146 (71.92%), Postives = 120/146 (82.19%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. Swiss-Prot
Match: sp|P49332|GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum OX=4097 GN=PARC PE=2 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 9.4e-55 Identity = 104/146 (71.23%), Postives = 120/146 (82.19%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. Swiss-Prot
Match: sp|P46417|GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max OX=3847 GN=GST3 PE=1 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.3e-51 Identity = 97/147 (65.99%), Postives = 116/147 (78.91%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. Swiss-Prot
Match: sp|Q8GYM1|GSTUM_ARATH (Glutathione S-transferase U22 OS=Arabidopsis thaliana OX=3702 GN=GSTU22 PE=1 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 5.3e-50 Identity = 92/147 (62.59%), Postives = 114/147 (77.55%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. Swiss-Prot
Match: sp|Q9ZRW8|GSTUJ_ARATH (Glutathione S-transferase U19 OS=Arabidopsis thaliana OX=3702 GN=GSTU19 PE=1 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 7.0e-50 Identity = 97/147 (65.99%), Postives = 111/147 (75.51%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. TrEMBL
Match: tr|A0A0A0KVG8|A0A0A0KVG8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064110 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 2.6e-102 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. TrEMBL
Match: tr|A0A1S3BTH7|A0A1S3BTH7_CUCME (probable glutathione S-transferase OS=Cucumis melo OX=3656 GN=LOC103492986 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 7.7e-62 Identity = 120/147 (81.63%), Postives = 129/147 (87.76%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. TrEMBL
Match: tr|A0A1S3BRS6|A0A1S3BRS6_CUCME (probable glutathione S-transferase parC isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492981 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 3.3e-57 Identity = 110/154 (71.43%), Postives = 129/154 (83.77%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. TrEMBL
Match: tr|A0A2N9GCB8|A0A2N9GCB8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28099 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.3e-56 Identity = 109/170 (64.12%), Postives = 128/170 (75.29%), Query Frame = 0
BLAST of CsaV3_4G007690 vs. TrEMBL
Match: tr|A0A0A0KVH1|A0A0A0KVH1_CUCSA (Glutathione S-transferase OS=Cucumis sativus OX=3659 GN=Csa_4G064650 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.2e-56 Identity = 109/150 (72.67%), Postives = 127/150 (84.67%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|