CsaV3_4G007400 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G007400
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Scarecrow-like protein
Location	chr4 : 5052044 .. 5054439 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAGAAAGAAGGAAGTAATTAGTTTAAGGAACATAAGATATTGTTAAGAATATAAAATGATGATTAGAGAAGACATAATAAGAAAATGTAAACCTCAACATAAAAAAACGCACTTAAAGACAACGGTAGACGGAGTACCTAACAACTTTTCTTAATAATATGATTTAAATATTACTTCCGTTTTTTCTTCCCAAAAATATAAATAAAACTTTTTAATGTATGATTCTTCATTTTCATCAATTTATTTAAAACAATGACAATTTTGGACCTTTCATTTGTATTTAAAACATAAATGAATGTTATAAATCAAAGTCATAAACATGAAGCTAAGCTAAGCTAATATAATTTTATTTTTGTTAAAAGAAAAAAGAAAAAGGAGTAATTGAGAAATGATTTTAAGATAGGCTTATTCATCTTCTTCTTCTTCTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCTCTTCATTCTTTCACTTATCTGACACATTTTTTTTGTTTTTGTTTGCGAGGAAAGTCTGCAATGAACTTTTTCCATTTCTCCCTCAATTCTTGTTTGTCTCTTTTCCCCCAAAAGCTTCTCTCCTTTTGATTCTCTTTTTCCCCCAAATTCATCCCATCATGCTTCGTAGCTTAATCCCTCATTCCCCCATCAATTCCACTTCCAACAATTCTCCTTCCTCCATGAAGTCTAAACGCTCCGATCACCATCTCGATCCCGACTCCAACCCCTCCACCGCCGCCGACTCCTCCCCGGACCACCCTCCCTCCAAGCGCCTCAATTCCTGTCACGACCATGACCACGACCACGACCACGACCCTCCTCCTCCCCTCGACCCCACCGACTCCACCGGTTTGCGTTTGCTCGGCCTTCTCCTTCAATGCGCCGAGTGCGTTGCCATCGATAACCTCCAAGAGGCCAACGATCTCCTACCCGAAATCTCCGAGCTCTCCTCGCCTTTTGGAACCTCACCGGAGCGCGTCGGCGCCTACTTCGCCCACGCGCTTCAAGCTAGAGTCATAAGTTCCTGCTTAGGAACTTACTCGCCCTTAACCATTAGAACACTGAATCAAACTCAATCGCAGAGGATTTTCAACGCTCTTCAATCTTACAATTCCATCAGTCCGTTGATTAAGTTTTCTCACTTCACCGCTAATCAAGCCATCTTCCAAGCCTTAGACGGTGAAGATCGAGTCCACGTTATCGACCTCGACGTAATGCAAGGTCTCCAATGGCCTGGATTATTCCACATCCTCGCTTCTCGGCCAAAGAAAATCCAATCCCTACGAATCTCCGGCTTCGGATCCTCTTCCGATTTGCTCCAATCAACAGGACGAAGACTGGCGGATTTTGCAACATCTCTAGGCCTCCCCTTCGAATTCCATCCAGTGGAAGGCAAAATCGGGAACCTAACAAACCCGGGTCAACTGGAATTGAGATCTGGGGAAGCAGTAGTAGTTCATTGGATGCATCATTGCTTATACGACGTAACGGGAAGCGATATAGGTACGCTTCGATTACTTTCAACTCTAAAACCAAAAATAATCACGATTGTTGAACAAGATCTGAGCCATGGAGGTAGTTTTCTAGGAAGATTTGTAGAAGCTTTACATTATTATAGCGCGTTATTTGACGCGCTTGGTGATAGTTTAGGGATGGATAGTATTGAAAGACATGTGGTGGAACAGCAATTGTTTGGGTGTGAGATCAGGAACATTATCGCCGTTGGTGGACCCAAAAGAACTGGTGAAGTTAAGGTCGAAAGATGGGGAGATGAACTCAAACGCCTCGGCTTTAAACCCCTTTCTCTTCGTGGAAACCCCGCTGCTCAAGCCAGTTTACTTCTAGGGATGTTCCCTTGGAAAGGCTATACTCTTGTTGAAGAGAATGGGTGCCTTAAACTTGGATGGAAGGATTTATCTCTTCTTACAGCCTCAGCATGGCAGCCCACGTAACCACACACTACCAGTTTTGTATTATAAATCGAACCAACCAAATGCTCTAGCCCTCGCTACTAGATCAGGTTGTATTTTTTGGTTTATTTTGTTGCACACCCAAAATAGAGAAAGGAAGGTATGAAGGTTTGAAGGTTTGAAGGTTTGAAGGTTCGAAGGAATGGGGACAAGAAAGTTTGTCTTACTTTTTAGATTTGTTGGGCTCCCTTTTTTTTTTCTTTTCTCTCTTCTTGAAGGCATTTTTGACATTATAATTTAATTATTGTTGGATTGGTAGCAGCTGAACCAAACTTATTTTTGTAATAGAAATTCTTATCTGCTACTGTCTTCTTTTATGTAAAATATAATATATATATATATATATCTATGTATTGTTTTGGAATCATATTCATCAATCATCAATAACATCAATGGTTCTTTTTATAAGTTAATTTGAAAATA

mRNA sequence

ATGCTTCGTAGCTTAATCCCTCATTCCCCCATCAATTCCACTTCCAACAATTCTCCTTCCTCCATGAAGTCTAAACGCTCCGATCACCATCTCGATCCCGACTCCAACCCCTCCACCGCCGCCGACTCCTCCCCGGACCACCCTCCCTCCAAGCGCCTCAATTCCTGTCACGACCATGACCACGACCACGACCACGACCCTCCTCCTCCCCTCGACCCCACCGACTCCACCGGTTTGCGTTTGCTCGGCCTTCTCCTTCAATGCGCCGAGTGCGTTGCCATCGATAACCTCCAAGAGGCCAACGATCTCCTACCCGAAATCTCCGAGCTCTCCTCGCCTTTTGGAACCTCACCGGAGCGCGTCGGCGCCTACTTCGCCCACGCGCTTCAAGCTAGAGTCATAAGTTCCTGCTTAGGAACTTACTCGCCCTTAACCATTAGAACACTGAATCAAACTCAATCGCAGAGGATTTTCAACGCTCTTCAATCTTACAATTCCATCAGTCCGTTGATTAAGTTTTCTCACTTCACCGCTAATCAAGCCATCTTCCAAGCCTTAGACGGTGAAGATCGAGTCCACGTTATCGACCTCGACGTAATGCAAGGTCTCCAATGGCCTGGATTATTCCACATCCTCGCTTCTCGGCCAAAGAAAATCCAATCCCTACGAATCTCCGGCTTCGGATCCTCTTCCGATTTGCTCCAATCAACAGGACGAAGACTGGCGGATTTTGCAACATCTCTAGGCCTCCCCTTCGAATTCCATCCAGTGGAAGGCAAAATCGGGAACCTAACAAACCCGGGTCAACTGGAATTGAGATCTGGGGAAGCAGTAGTAGTTCATTGGATGCATCATTGCTTATACGACGTAACGGGAAGCGATATAGGTACGCTTCGATTACTTTCAACTCTAAAACCAAAAATAATCACGATTGTTGAACAAGATCTGAGCCATGGAGGTAGTTTTCTAGGAAGATTTGTAGAAGCTTTACATTATTATAGCGCGTTATTTGACGCGCTTGGTGATAGTTTAGGGATGGATAGTATTGAAAGACATGTGGTGGAACAGCAATTGTTTGGGTGTGAGATCAGGAACATTATCGCCGTTGGTGGACCCAAAAGAACTGGTGAAGTTAAGGTCGAAAGATGGGGAGATGAACTCAAACGCCTCGGCTTTAAACCCCTTTCTCTTCGTGGAAACCCCGCTGCTCAAGCCAGTTTACTTCTAGGGATGTTCCCTTGGAAAGGCTATACTCTTGTTGAAGAGAATGGGTGCCTTAAACTTGGATGGAAGGATTTATCTCTTCTTACAGCCTCAGCATGGCAGCCCACGTAA

Coding sequence (CDS)

ATGCTTCGTAGCTTAATCCCTCATTCCCCCATCAATTCCACTTCCAACAATTCTCCTTCCTCCATGAAGTCTAAACGCTCCGATCACCATCTCGATCCCGACTCCAACCCCTCCACCGCCGCCGACTCCTCCCCGGACCACCCTCCCTCCAAGCGCCTCAATTCCTGTCACGACCATGACCACGACCACGACCACGACCCTCCTCCTCCCCTCGACCCCACCGACTCCACCGGTTTGCGTTTGCTCGGCCTTCTCCTTCAATGCGCCGAGTGCGTTGCCATCGATAACCTCCAAGAGGCCAACGATCTCCTACCCGAAATCTCCGAGCTCTCCTCGCCTTTTGGAACCTCACCGGAGCGCGTCGGCGCCTACTTCGCCCACGCGCTTCAAGCTAGAGTCATAAGTTCCTGCTTAGGAACTTACTCGCCCTTAACCATTAGAACACTGAATCAAACTCAATCGCAGAGGATTTTCAACGCTCTTCAATCTTACAATTCCATCAGTCCGTTGATTAAGTTTTCTCACTTCACCGCTAATCAAGCCATCTTCCAAGCCTTAGACGGTGAAGATCGAGTCCACGTTATCGACCTCGACGTAATGCAAGGTCTCCAATGGCCTGGATTATTCCACATCCTCGCTTCTCGGCCAAAGAAAATCCAATCCCTACGAATCTCCGGCTTCGGATCCTCTTCCGATTTGCTCCAATCAACAGGACGAAGACTGGCGGATTTTGCAACATCTCTAGGCCTCCCCTTCGAATTCCATCCAGTGGAAGGCAAAATCGGGAACCTAACAAACCCGGGTCAACTGGAATTGAGATCTGGGGAAGCAGTAGTAGTTCATTGGATGCATCATTGCTTATACGACGTAACGGGAAGCGATATAGGTACGCTTCGATTACTTTCAACTCTAAAACCAAAAATAATCACGATTGTTGAACAAGATCTGAGCCATGGAGGTAGTTTTCTAGGAAGATTTGTAGAAGCTTTACATTATTATAGCGCGTTATTTGACGCGCTTGGTGATAGTTTAGGGATGGATAGTATTGAAAGACATGTGGTGGAACAGCAATTGTTTGGGTGTGAGATCAGGAACATTATCGCCGTTGGTGGACCCAAAAGAACTGGTGAAGTTAAGGTCGAAAGATGGGGAGATGAACTCAAACGCCTCGGCTTTAAACCCCTTTCTCTTCGTGGAAACCCCGCTGCTCAAGCCAGTTTACTTCTAGGGATGTTCCCTTGGAAAGGCTATACTCTTGTTGAAGAGAATGGGTGCCTTAAACTTGGATGGAAGGATTTATCTCTTCTTACAGCCTCAGCATGGCAGCCCACGTAA

Protein sequence

MLRSLIPHSPINSTSNNSPSSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHDHDHDHDHDPPPPLDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPT

Homology

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BLAST of CsaV3_4G007400 vs. NCBI nr
Match: XP_004147738.1 (PREDICTED: scarecrow-like protein 23 [Cucumis sativus] >KGN53498.1 hypothetical protein Csa_4G061850 [Cucumis sativus])

HSP 1 Score: 865.1 bits (2234), Expect = 1.0e-247
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0


Query: 1   MLRSLIPHSPINSTSNNSPSSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXXX 60
           MLRSLIPHSPINSTSNNSPSSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXXX
Sbjct: 1   MLRSLIPHSPINSTSNNSPSSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXXX 60

Query: 61  XXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER 120
           XXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER
Sbjct: 61  XXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER 120

Query: 121 VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ 180
           VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ
Sbjct: 121 VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ 180

Query: 181 AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR 240
           AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR
Sbjct: 181 AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR 240

Query: 241 LADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL 300
           LADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL
Sbjct: 241 LADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL 300

Query: 301 LSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFG 360
           LSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFG
Sbjct: 301 LSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFG 360

Query: 361 CEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLV 420
           CEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLV
Sbjct: 361 CEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLV 420

Query: 421 EENGCLKLGWKDLSLLTASAWQPT 445
           EENGCLKLGWKDLSLLTASAWQPT
Sbjct: 421 EENGCLKLGWKDLSLLTASAWQPT 444

[Close]

BLAST of CsaV3_4G007400 vs. NCBI nr
Match: XP_022980905.1 (scarecrow-like protein 23 [Cucurbita maxima] >XP_023552635.1 scarecrow-like protein 23 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 748.0 bits (1930), Expect = 1.8e-212
Identity = 383/451 (84.92%), Postives = 396/451 (87.80%), Query Frame = 0


Query: 1   MLRSLIPHSPINSTSNNSPSSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNS----- 60
           MLRSLIPHSPINS SN    SM SKR              ADSS D P SKRLNS     
Sbjct: 1   MLRSLIPHSPINSASN----SMSSKR-----------PADADSSADDPSSKRLNSGPSNF 60

Query: 61  ---CHXXXXXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSS 120
                              D +DSTGLRLLGLLLQCAECVA+DNLQEANDLLPEISELSS
Sbjct: 61  HAGASGEKDVEEEEELPLVDGSDSTGLRLLGLLLQCAECVAMDNLQEANDLLPEISELSS 120

Query: 121 PFGTSPERVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIK 180
           PFGTSPERVGAYFAHALQARVISSCLGTYSPL+IRTLNQTQSQR+FNALQSYNSISPLIK
Sbjct: 121 PFGTSPERVGAYFAHALQARVISSCLGTYSPLSIRTLNQTQSQRMFNALQSYNSISPLIK 180

Query: 181 FSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSD 240
           FSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASR KKIQSLRISGFGSSS+
Sbjct: 181 FSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRSKKIQSLRISGFGSSSE 240

Query: 241 LLQSTGRRLADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTG 300
           LLQSTG+RLADFATSLGLPFEFHPVEGKIGNLT+P QLELR+GEAVVVHWMHHCLYD+TG
Sbjct: 241 LLQSTGQRLADFATSLGLPFEFHPVEGKIGNLTDPKQLELRAGEAVVVHWMHHCLYDITG 300

Query: 301 SDIGTLRLLSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERH 360
           SDIGTLRLLSTLKPK+ITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSL MDS+ERH
Sbjct: 301 SDIGTLRLLSTLKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLAMDSVERH 360

Query: 361 VVEQQLFGCEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMF 420
           VVEQQL GCEIRNIIAVGGPKRTGEVKVERWGDELKR+GF  +SL GNPAAQASLLLGMF
Sbjct: 361 VVEQQLLGCEIRNIIAVGGPKRTGEVKVERWGDELKRVGFGAVSLGGNPAAQASLLLGMF 420

Query: 421 PWKGYTLVEENGCLKLGWKDLSLLTASAWQP 444
           PWKGYTLVEENGCLKLGWKDLSLLTASAWQP
Sbjct: 421 PWKGYTLVEENGCLKLGWKDLSLLTASAWQP 436

[Close]

BLAST of CsaV3_4G007400 vs. NCBI nr
Match: XP_022942296.1 (scarecrow-like protein 23 [Cucurbita moschata])

HSP 1 Score: 746.9 bits (1927), Expect = 4.0e-212
Identity = 382/451 (84.70%), Postives = 396/451 (87.80%), Query Frame = 0


Query: 1   MLRSLIPHSPINSTSNNSPSSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNS----- 60
           MLRSLIPHSPINS SN    SM SKR              ADS+ D P SKRLNS     
Sbjct: 1   MLRSLIPHSPINSASN----SMSSKR-----------PADADSAADDPSSKRLNSGPSNF 60

Query: 61  ---CHXXXXXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSS 120
                              D +DSTGLRLLGLLLQCAECVA+DNLQEANDLLPEISELSS
Sbjct: 61  HAGASGEKDVEEEEELPLVDGSDSTGLRLLGLLLQCAECVAMDNLQEANDLLPEISELSS 120

Query: 121 PFGTSPERVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIK 180
           PFGTSPERVGAYFAHALQARVISSCLGTYSPL+IRTLNQTQSQR+FNALQSYNSISPLIK
Sbjct: 121 PFGTSPERVGAYFAHALQARVISSCLGTYSPLSIRTLNQTQSQRMFNALQSYNSISPLIK 180

Query: 181 FSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSD 240
           FSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASR KKIQSLRISGFGSSS+
Sbjct: 181 FSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRSKKIQSLRISGFGSSSE 240

Query: 241 LLQSTGRRLADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTG 300
           LLQSTG+RLADFATSLGLPFEFHPVEGKIGNLT+P QLELR+GEAVVVHWMHHCLYD+TG
Sbjct: 241 LLQSTGQRLADFATSLGLPFEFHPVEGKIGNLTDPKQLELRAGEAVVVHWMHHCLYDITG 300

Query: 301 SDIGTLRLLSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERH 360
           SDIGTLRLLSTLKPK+ITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSL MDS+ERH
Sbjct: 301 SDIGTLRLLSTLKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLAMDSVERH 360

Query: 361 VVEQQLFGCEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMF 420
           VVEQQL GCEIRNIIAVGGPKRTGEVKVERWGDELKR+GF  +SL GNPAAQASLLLGMF
Sbjct: 361 VVEQQLLGCEIRNIIAVGGPKRTGEVKVERWGDELKRVGFGAVSLGGNPAAQASLLLGMF 420

Query: 421 PWKGYTLVEENGCLKLGWKDLSLLTASAWQP 444
           PWKGYTLVEENGCLKLGWKDLSLLTASAWQP
Sbjct: 421 PWKGYTLVEENGCLKLGWKDLSLLTASAWQP 436

[Close]

BLAST of CsaV3_4G007400 vs. NCBI nr
Match: XP_008451856.1 (PREDICTED: scarecrow-like protein 23 [Cucumis melo])

HSP 1 Score: 746.5 bits (1926), Expect = 5.2e-212
Identity = 394/443 (88.94%), Postives = 398/443 (89.84%), Query Frame = 0


Query: 1   MLRSLIPHSPINSTSNNSPSSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXXX 60
           MLRSLIPHSPINST                                           XXX
Sbjct: 1   MLRSLIPHSPINST-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER 120
           XXXXXXXXXX DPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER
Sbjct: 61  XXXXXXXXXXLDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER 120

Query: 121 VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ 180
           VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ
Sbjct: 121 VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ 180

Query: 181 AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR 240
           AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR
Sbjct: 181 AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR 240

Query: 241 LADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL 300
           LADFATSLGLPFEFHPVEGKIGN+TNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL
Sbjct: 241 LADFATSLGLPFEFHPVEGKIGNITNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL 300

Query: 301 LSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFG 360
           LS LKPK+ITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDS+ERHVVEQQLFG
Sbjct: 301 LSNLKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSVERHVVEQQLFG 360

Query: 361 CEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLV 420
           CEIRNIIAVGGPKRTGEVKVERWGDELKR+GFKPLSLRGNPAAQASLLLGMFPWKGYTLV
Sbjct: 361 CEIRNIIAVGGPKRTGEVKVERWGDELKRVGFKPLSLRGNPAAQASLLLGMFPWKGYTLV 420

Query: 421 EENGCLKLGWKDLSLLTASAWQP 444
           EENGCLKLGWKDLSLLTASAWQP
Sbjct: 421 EENGCLKLGWKDLSLLTASAWQP 442

[Close]

BLAST of CsaV3_4G007400 vs. NCBI nr
Match: OMO65883.1 (Transcription factor GRAS [Corchorus capsularis])

HSP 1 Score: 699.9 bits (1805), Expect = 5.6e-198
Identity = 348/445 (78.20%), Postives = 393/445 (88.31%), Query Frame = 0


Query: 1   MLRSLIPHSPINSTSNNSP-SSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXX 60
           ML+SL+P SPINS  +++P SSMKSKR+D     D + +T  DSS D P +KR N     
Sbjct: 1   MLQSLVPQSPINSNPSSNPNSSMKSKRADR----DVSAATGDDSSADDPSTKRPNFSSGD 60

Query: 61  XXXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPE 120
                       +  +STGLRLLGLLLQCAECVA+DNL +A DLLPEISELSSPFG+SPE
Sbjct: 61  KTVADEQEETVIE-GESTGLRLLGLLLQCAECVAMDNLDDATDLLPEISELSSPFGSSPE 120

Query: 121 RVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTAN 180
           RVGAYFAHALQARV+SSCL TYSPL  ++L  TQSQ+IFNALQSYNSISPL+KFSHFTAN
Sbjct: 121 RVGAYFAHALQARVVSSCLRTYSPLDTKSLTLTQSQKIFNALQSYNSISPLVKFSHFTAN 180

Query: 181 QAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGR 240
           QAIFQALDG+DRVHVIDLD+MQGLQWPGLFHILASR KKI+S+RI+GFGSSS+LL+STGR
Sbjct: 181 QAIFQALDGQDRVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLESTGR 240

Query: 241 RLADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLR 300
           RLADFATSLGLPFEFHP+EGKIGN+T+  QL ++S EAVVVHWMHHCLYD+TGSD+GTLR
Sbjct: 241 RLADFATSLGLPFEFHPLEGKIGNVTDLSQLGVQSSEAVVVHWMHHCLYDITGSDLGTLR 300

Query: 301 LLSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLF 360
           LL+ LKPK+ITIVEQDLSHGGSFLGRFVEALHYYSALFDALGD LG+DS+ERH+VEQQLF
Sbjct: 301 LLTLLKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDGLGVDSLERHMVEQQLF 360

Query: 361 GCEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTL 420
           G EIRNI+AVGGPKRTGEVKVERWG+EL+R+GF+P+SL GNPAAQASLLLGMFPWKGYTL
Sbjct: 361 GSEIRNIVAVGGPKRTGEVKVERWGEELRRVGFRPVSLGGNPAAQASLLLGMFPWKGYTL 420

Query: 421 VEENGCLKLGWKDLSLLTASAWQPT 445
           VEENGCLKLGWKDLSLLTASAWQP+
Sbjct: 421 VEENGCLKLGWKDLSLLTASAWQPS 440

[Close]

BLAST of CsaV3_4G007400 vs. TAIR10
Match: AT5G41920.1 (GRAS family transcription factor)

HSP 1 Score: 516.5 bits (1329), Expect = 1.6e-146
Identity = 259/370 (70.00%), Postives = 300/370 (81.08%), Query Frame = 0


Query: 76  STGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVIS 135
           +  ++LL LLLQCAE VA D+L+EA+ LL EISE+ SPFG+SPERV AYFA ALQ RVIS
Sbjct: 35  AAAIKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVIS 94

Query: 136 SCL-GTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHV 195
           S L G  SPL+ + L   QSQ+IF+ALQ+YNS+SPLIKFSHFTANQAIFQALDGED VH+
Sbjct: 95  SYLSGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHI 154

Query: 196 IDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFATSLGLPFEF 255
           IDLDVMQGLQWP LFHILASRP+K++S+RI+GFGSSSDLL STGRRLADFA+SL LPFEF
Sbjct: 155 IDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEF 214

Query: 256 HPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKIITIVEQ 315
           HP+EG IGNL +P QL  R GEAVVVHWM H LYDVTG+++ TL +L  LKP +IT+VEQ
Sbjct: 215 HPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNLITVVEQ 274

Query: 316 DLSH--GGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRNIIAVGGP 375
           +LS+  GGSFLGRFVEALHYYSALFD           ER  VEQ + G EIRNI+A GG 
Sbjct: 275 ELSYDDGGSFLGRFVEALHYYSALFDXXXXXXXXXXXERFTVEQIVLGTEIRNIVAHGGG 334

Query: 376 KRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKD 435
           +R    K  +W +EL R+GF+P+SLRGNPA QA LLLGM PW GYTLVEENG L+LGWKD
Sbjct: 335 RR----KRMKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKD 394

Query: 436 LSLLTASAWQ 443
           LSLLTASAW+
Sbjct: 395 LSLLTASAWK 400

[Close]

BLAST of CsaV3_4G007400 vs. TAIR10
Match: AT3G54220.1 (GRAS family transcription factor)

HSP 1 Score: 492.7 bits (1267), Expect = 2.5e-139
Identity = 238/369 (64.50%), Postives = 292/369 (79.13%), Query Frame = 0


Query: 75  DSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVI 134
           D  GL LL LLLQCAE V+ DNL+EAN LL EIS+LS+P+GTS +RV AYF+ A+ AR++
Sbjct: 284 DEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLL 343

Query: 135 SSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHV 194
           +SCLG Y+ L  R + QT S ++ +A Q +N ISPL+KFSHFTANQAI +A + ED VH+
Sbjct: 344 NSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHI 403

Query: 195 IDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFATSLGLPFEF 254
           IDLD+MQGLQWPGLFHILASRP     +R++G G+S + LQ+TG+RL+DFA  LGLPFEF
Sbjct: 404 IDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLPFEF 463

Query: 255 HPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKIITIVEQ 314
            P+  K+GNL +  +L +R  EAV VHW+ H LYDVTGSD  TL LL  L PK++T+VEQ
Sbjct: 464 CPLAEKVGNL-DTERLNVRKREAVAVHWLQHSLYDVTGSDAHTLWLLQRLAPKVVTVVEQ 523

Query: 315 DLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRNIIAVGGPKR 374
           DLSH GSFLGRFVEA+HYYSALFD+LG S G +S ERHVVEQQL   EIRN++AVGGP R
Sbjct: 524 DLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSR 583

Query: 375 TGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLS 434
           +GEVK E W +++++ GFK +SL GN A QA+LLLGMFP  GYTLV++NG LKLGWKDLS
Sbjct: 584 SGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLS 643

Query: 435 LLTASAWQP 444
           LLTASAW P
Sbjct: 644 LLTASAWTP 651

[Close]

BLAST of CsaV3_4G007400 vs. TAIR10
Match: AT3G03450.1 (RGA-like 2)

HSP 1 Score: 226.5 bits (576), Expect = 3.3e-59
Identity = 141/379 (37.20%), Postives = 205/379 (54.09%), Query Frame = 0


Query: 74  TDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARV 133
           +  TG+RL+  L+ CAE +  +NL  A+ L+  +  L+     +  +V  YFA AL  R+
Sbjct: 173 SQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRI 232

Query: 134 ISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVH 193
                  Y+  T        S      +  Y S  P +KF+HFTANQAI +A+    RVH
Sbjct: 233 YRD----YTAETDVCAAVNPSFEEVLEMHFYES-CPYLKFAHFTANQAILEAVTTARRVH 292

Query: 194 VIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFG----SSSDLLQSTGRRLADFATSLG 253
           VIDL + QG+QWP L   LA RP    S R++G G     +SD LQ  G +LA FA ++G
Sbjct: 293 VIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMG 352

Query: 254 LPFEFHPVEGKIGNLTNPGQLELR-SGEAVVVHWMH--HCLYDVTGSDIGTLRLLSTLKP 313
           + FEF  +  +  +   P   E R   E +VV+ +   H L   +GS    L  +  +KP
Sbjct: 353 VEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNTVKAIKP 412

Query: 314 KIITIVEQDLSHGG-SFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRN 373
            I+T+VEQ+ +H G  FL RF EALHYYS+LFD+L DS  + S +R V+ +   G +I N
Sbjct: 413 SIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDR-VMSEVYLGRQILN 472

Query: 374 IIAVGGPKRTGEVK-VERWGDELKRLGFKPLSLRGNPAAQASLLLGMF-PWKGYTLVEEN 433
           ++A  G  R    +   +W   +K  GF P+ L  +   QAS+LL ++    GY + E +
Sbjct: 473 VVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEEND 532

Query: 434 GCLKLGWKDLSLLTASAWQ 443
           GCL +GW+   L+T SAW+
Sbjct: 533 GCLMIGWQTRPLITTSAWK 545

[Close]

BLAST of CsaV3_4G007400 vs. TAIR10
Match: AT1G63100.1 (GRAS family transcription factor)

HSP 1 Score: 222.2 bits (565), Expect = 6.2e-58
Identity = 137/381 (35.96%), Postives = 201/381 (52.76%), Query Frame = 0


Query: 81  LLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSP-ERVGAYFAHALQARVISSCLG 140
           L+ LL  C + +   N+   N  +    +L+SP G +P  R+ AY+  AL  RV      
Sbjct: 274 LVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWPH 333

Query: 141 TYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHVIDLDV 200
            +     R  ++T      NAL+  N ++P+ KF HFTAN+ + +A +G++RVH+ID D+
Sbjct: 334 IFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDI 393

Query: 201 MQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFATSLGLPFEFHPVEG 260
            QGLQWP  F  LASR      +RI+G G S   L  TG RL  FA ++ L FEFHPV  
Sbjct: 394 KQGLQWPSFFQSLASRINPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQFEFHPVVD 453

Query: 261 KIGNLTNPGQLELRSGEAVVVH---WMHHCLYDVTGSDI-GTLRLLSTLKPKIITIVEQD 320
           ++ ++     L ++ GE+V V+    MH  LYD TG+ I   L L+ +  P  + + EQ+
Sbjct: 454 RLEDV-RLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPIALVLAEQE 513

Query: 321 LSHGGSFL-GRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRNIIAV-GGPK 380
             H    L  R   +L YYSA+FDA+  +L  DS+ R  VE+ LFG EIRNI+A  G  +
Sbjct: 514 AEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHR 573

Query: 381 RTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMF--PWKGYTLVEEN-------- 440
           +   V    W   L++LGF+ L +      Q+ +LL M+    +G+  VE +        
Sbjct: 574 QERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEG 633

Query: 441 ---GCLKLGWKDLSLLTASAW 442
              G + L W +  L T SAW
Sbjct: 634 GRGGGVTLRWSEQPLYTISAW 653

[Close]

BLAST of CsaV3_4G007400 vs. TAIR10
Match: AT1G66350.1 (RGA-like 1)

HSP 1 Score: 215.3 bits (547), Expect = 7.6e-56
Identity = 131/377 (34.75%), Postives = 203/377 (53.85%), Query Frame = 0


Query: 74  TDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARV 133
           +  TG+RL+  LL CAE V  +NL+ A+ L+  +  L+S    +  +V  YFA  L  R+
Sbjct: 145 SQETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRI 204

Query: 134 ISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVH 193
               +     + + + + T     + +        P +KF+HFTANQAI +     ++VH
Sbjct: 205 YR--IYPRDDVALSSFSDTLQIHFYES-------CPYLKFAHFTANQAILEVFATAEKVH 264

Query: 194 VIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFATSLGLPFE 253
           VIDL +  GLQWP L   LA RP      R++G G S   +Q  G +L   A+++G+ FE
Sbjct: 265 VIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGVNFE 324

Query: 254 FHPVEGKIGNLTN--PGQLELRSG-EAVVVHWMH--HCLYDVTGSDIGTLRLLSTLKPKI 313
           F  +   + NL++  P  L++R G E+V V+ +   H L    GS    L  + +++P I
Sbjct: 325 FKSI--ALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPDI 384

Query: 314 ITIVEQDLSHGGS-FLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRNII 373
           +T+VEQ+ +H G+ FL RF E+LHYYS+LFD+L      D     V+ +   G +I N++
Sbjct: 385 MTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQD----RVMSELFLGRQILNLV 444

Query: 374 AVGGPKRTGEVK-VERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPW-KGYTLVEENGC 433
           A  G  R    + + +W +     GFKP+S+  N   QAS+LL ++    GY + E  GC
Sbjct: 445 ACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGC 504

Query: 434 LKLGWKDLSLLTASAWQ 443
           L LGW+   L+  SAW+
Sbjct: 505 LLLGWQTRPLIATSAWR 506

[Close]

BLAST of CsaV3_4G007400 vs. Swiss-Prot
Match: sp|Q9FHZ1|SCL23_ARATH (Scarecrow-like protein 23 OS=Arabidopsis thaliana OX=3702 GN=SCL23 PE=1 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 2.9e-145
Identity = 259/370 (70.00%), Postives = 300/370 (81.08%), Query Frame = 0


Query: 76  STGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVIS 135
           +  ++LL LLLQCAE VA D+L+EA+ LL EISE+ SPFG+SPERV AYFA ALQ RVIS
Sbjct: 35  AAAIKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVIS 94

Query: 136 SCL-GTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHV 195
           S L G  SPL+ + L   QSQ+IF+ALQ+YNS+SPLIKFSHFTANQAIFQALDGED VH+
Sbjct: 95  SYLSGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHI 154

Query: 196 IDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFATSLGLPFEF 255
           IDLDVMQGLQWP LFHILASRP+K++S+RI+GFGSSSDLL STGRRLADFA+SL LPFEF
Sbjct: 155 IDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEF 214

Query: 256 HPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKIITIVEQ 315
           HP+EG IGNL +P QL  R GEAVVVHWM H LYDVTG+++ TL +L  LKP +IT+VEQ
Sbjct: 215 HPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNLITVVEQ 274

Query: 316 DLSH--GGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRNIIAVGGP 375
           +LS+  GGSFLGRFVEALHYYSALFD           ER  VEQ + G EIRNI+A GG 
Sbjct: 275 ELSYDDGGSFLGRFVEALHYYSALFDXXXXXXXXXXXERFTVEQIVLGTEIRNIVAHGGG 334

Query: 376 KRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKD 435
           +R    K  +W +EL R+GF+P+SLRGNPA QA LLLGM PW GYTLVEENG L+LGWKD
Sbjct: 335 RR----KRMKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKD 394

Query: 436 LSLLTASAWQ 443
           LSLLTASAW+
Sbjct: 395 LSLLTASAWK 400

[Close]

BLAST of CsaV3_4G007400 vs. Swiss-Prot
Match: sp|Q9M384|SCR_ARATH (Protein SCARECROW OS=Arabidopsis thaliana OX=3702 GN=SCR PE=1 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 4.4e-138
Identity = 238/369 (64.50%), Postives = 292/369 (79.13%), Query Frame = 0


Query: 75  DSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVI 134
           D  GL LL LLLQCAE V+ DNL+EAN LL EIS+LS+P+GTS +RV AYF+ A+ AR++
Sbjct: 284 DEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLL 343

Query: 135 SSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHV 194
           +SCLG Y+ L  R + QT S ++ +A Q +N ISPL+KFSHFTANQAI +A + ED VH+
Sbjct: 344 NSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHI 403

Query: 195 IDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFATSLGLPFEF 254
           IDLD+MQGLQWPGLFHILASRP     +R++G G+S + LQ+TG+RL+DFA  LGLPFEF
Sbjct: 404 IDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLPFEF 463

Query: 255 HPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKIITIVEQ 314
            P+  K+GNL +  +L +R  EAV VHW+ H LYDVTGSD  TL LL  L PK++T+VEQ
Sbjct: 464 CPLAEKVGNL-DTERLNVRKREAVAVHWLQHSLYDVTGSDAHTLWLLQRLAPKVVTVVEQ 523

Query: 315 DLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRNIIAVGGPKR 374
           DLSH GSFLGRFVEA+HYYSALFD+LG S G +S ERHVVEQQL   EIRN++AVGGP R
Sbjct: 524 DLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSR 583

Query: 375 TGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLS 434
           +GEVK E W +++++ GFK +SL GN A QA+LLLGMFP  GYTLV++NG LKLGWKDLS
Sbjct: 584 SGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLS 643

Query: 435 LLTASAWQP 444
           LLTASAW P
Sbjct: 644 LLTASAWTP 651

[Close]

BLAST of CsaV3_4G007400 vs. Swiss-Prot
Match: sp|Q2Z2E9|SCR_IPONI (Protein SCARECROW OS=Ipomoea nil OX=35883 GN=SCR PE=1 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.5e-133
Identity = 228/366 (62.30%), Postives = 284/366 (77.60%), Query Frame = 0


Query: 78  GLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVISSC 137
           GL LL LLLQCAE VA DNL EAN +L ++SELS+P+GTS +RV AYF+ A+ AR+++SC
Sbjct: 414 GLHLLTLLLQCAEAVAADNLDEANRMLLQVSELSTPYGTSAQRVAAYFSEAMSARLVNSC 473

Query: 138 LGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHVIDL 197
           LG Y+   +  L  + +Q++ +A Q +N ISP +KFSHFTANQAI +A + EDRVH+IDL
Sbjct: 474 LGIYASAPLNALPLSLNQKMASAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDL 533

Query: 198 DVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFATSLGLPFEFHPV 257
           D+MQGLQWPGLFHILASRP     +R++G G+S + L++TG+RL+DFA  LGLPFEF PV
Sbjct: 534 DIMQGLQWPGLFHILASRPGGPPLVRLTGLGTSMEALEATGKRLSDFAQKLGLPFEFFPV 593

Query: 258 EGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKIITIVEQDLS 317
             K+GNL +P +L +   EAV VHW+ H LYDVTGSD  TL LL  L PK++T+VEQDLS
Sbjct: 594 ADKVGNL-DPQRLNVNKREAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLS 653

Query: 318 HGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRNIIAVGGPKRTGE 377
           H GSFLGRFVEA+HYYSALFD+LG   G +S ERH VEQQL   EIRN++AVGGP R+GE
Sbjct: 654 HAGSFLGRFVEAIHYYSALFDSLGACYGEESEERHAVEQQLLSREIRNVLAVGGPSRSGE 713

Query: 378 VKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLT 437
           VK   W ++ ++ GF+ +SL GN AAQA+LLLGMF   GYTL E+NG LKLGWKDL LLT
Sbjct: 714 VKFNNWREKFQQSGFRGVSLAGNAAAQATLLLGMFHSDGYTLAEDNGALKLGWKDLCLLT 773

Query: 438 ASAWQP 444
           ASAW+P
Sbjct: 774 ASAWRP 778

[Close]

BLAST of CsaV3_4G007400 vs. Swiss-Prot
Match: sp|Q9AVK4|SCR_PEA (Protein SCARECROW OS=Pisum sativum OX=3888 GN=SCR PE=2 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 3.3e-133
Identity = 227/365 (62.19%), Postives = 289/365 (79.18%), Query Frame = 0


Query: 79  LRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVISSCL 138
           L LL LLLQCAE V+ +NL++AN +L EIS+LS+PFGTS +RV AYF+ A+ AR++SSCL
Sbjct: 445 LHLLTLLLQCAEAVSAENLEQANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCL 504

Query: 139 GTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHVIDLD 198
           G Y+ L + + +   +Q++ +A Q +N ISP +KFSHFTANQAI +A + E+RVH+IDLD
Sbjct: 505 GIYATLPVSS-HTPHNQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLD 564

Query: 199 VMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFATSLGLPFEFHPVE 258
           +MQGLQWPGLFHILASRP     +R++G G+S + L++TG+RL+DFA  LGLPFEF PV 
Sbjct: 565 IMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMETLEATGKRLSDFANKLGLPFEFFPVA 624

Query: 259 GKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKIITIVEQDLSH 318
            K+GN+ +  +L +   EAV VHW+ H LYDVTGSD  TL LL  L PK++T+VEQDLS+
Sbjct: 625 EKVGNI-DVEKLNVSKSEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSN 684

Query: 319 GGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRNIIAVGGPKRTGEV 378
            GSFLGRFVEA+HYYSALFD+LG S G +S ERHVVEQQL   EIRN++AVGGP R+GE+
Sbjct: 685 AGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEI 744

Query: 379 KVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTA 438
           K   W ++L++ GF+ +SL GN A QASLLLGMFP +GYTLVE+NG LKLGWKDL LLTA
Sbjct: 745 KFHNWREKLQQCGFRGVSLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTA 804

Query: 439 SAWQP 444
           SAW+P
Sbjct: 805 SAWRP 807

[Close]

BLAST of CsaV3_4G007400 vs. Swiss-Prot
Match: sp|Q9FUZ7|SCR_MAIZE (Protein SCARECROW OS=Zea mays OX=4577 GN=SCR PE=2 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 3.8e-129
Identity = 230/366 (62.84%), Postives = 280/366 (76.50%), Query Frame = 0


Query: 79  LRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVISSCL 138
           L LL LLLQCAE V  DNL +A+  L EI+EL++PFGTS +RV AYFA A+ AR++SSCL
Sbjct: 297 LHLLTLLLQCAEAVNADNLDDAHQTLLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCL 356

Query: 139 GTYSPLTIRTLNQTQSQ-RIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHVIDL 198
           G Y+PL   +    +   R+  A Q +N ISP +KFSHFTANQAI +A + E+RVH+IDL
Sbjct: 357 GLYAPLPPGSPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDL 416

Query: 199 DVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFATSLGLPFEFHPV 258
           D+MQGLQWPGLFHILASRP     +R++G G+S + L++TG+RL+DFA +LGLPFEF  V
Sbjct: 417 DIMQGLQWPGLFHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCAV 476

Query: 259 EGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRLLSTLKPKIITIVEQDLS 318
             K GN+ +P +L +   EAV VHW+HH LYDVTGSD  TL L+  L PK++T+VEQDLS
Sbjct: 477 AEKAGNV-DPEKLGVTRREAVAVHWLHHSLYDVTGSDSNTLWLIQRLAPKVVTMVEQDLS 536

Query: 319 HGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFGCEIRNIIAVGGPKRTGE 378
           H GSFL RFVEA+HYYSALFD+L  S G DS ERHVVEQQL   EIRN++AVGGP RTG+
Sbjct: 537 HSGSFLARFVEAIHYYSALFDSLDASYGEDSPERHVVEQQLLSREIRNVLAVGGPARTGD 596

Query: 379 VKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLT 438
           VK   W ++L + GF+  SL G+ AAQASLLLGMFP  GYTLVEENG LKLGWKDL LLT
Sbjct: 597 VKFGSWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGALKLGWKDLCLLT 656

Query: 439 ASAWQP 444
           ASAW+P
Sbjct: 657 ASAWRP 661

[Close]

BLAST of CsaV3_4G007400 vs. TrEMBL
Match: tr|A0A0A0KVE6|A0A0A0KVE6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G061850 PE=3 SV=1)

HSP 1 Score: 865.1 bits (2234), Expect = 6.6e-248
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0


Query: 1   MLRSLIPHSPINSTSNNSPSSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXXX 60
           MLRSLIPHSPINSTSNNSPSSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXXX
Sbjct: 1   MLRSLIPHSPINSTSNNSPSSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXXX 60

Query: 61  XXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER 120
           XXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER
Sbjct: 61  XXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER 120

Query: 121 VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ 180
           VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ
Sbjct: 121 VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ 180

Query: 181 AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR 240
           AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR
Sbjct: 181 AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR 240

Query: 241 LADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL 300
           LADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL
Sbjct: 241 LADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL 300

Query: 301 LSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFG 360
           LSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFG
Sbjct: 301 LSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFG 360

Query: 361 CEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLV 420
           CEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLV
Sbjct: 361 CEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLV 420

Query: 421 EENGCLKLGWKDLSLLTASAWQPT 445
           EENGCLKLGWKDLSLLTASAWQPT
Sbjct: 421 EENGCLKLGWKDLSLLTASAWQPT 444

[Close]

BLAST of CsaV3_4G007400 vs. TrEMBL
Match: tr|A0A1S3BTL2|A0A1S3BTL2_CUCME (scarecrow-like protein 23 OS=Cucumis melo OX=3656 GN=LOC103493019 PE=3 SV=1)

HSP 1 Score: 746.5 bits (1926), Expect = 3.4e-212
Identity = 394/443 (88.94%), Postives = 398/443 (89.84%), Query Frame = 0


Query: 1   MLRSLIPHSPINSTSNNSPSSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXXX 60
           MLRSLIPHSPINST                                           XXX
Sbjct: 1   MLRSLIPHSPINST-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER 120
           XXXXXXXXXX DPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER
Sbjct: 61  XXXXXXXXXXLDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPER 120

Query: 121 VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ 180
           VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ
Sbjct: 121 VGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQ 180

Query: 181 AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR 240
           AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR
Sbjct: 181 AIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRR 240

Query: 241 LADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL 300
           LADFATSLGLPFEFHPVEGKIGN+TNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL
Sbjct: 241 LADFATSLGLPFEFHPVEGKIGNITNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRL 300

Query: 301 LSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLFG 360
           LS LKPK+ITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDS+ERHVVEQQLFG
Sbjct: 301 LSNLKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSVERHVVEQQLFG 360

Query: 361 CEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTLV 420
           CEIRNIIAVGGPKRTGEVKVERWGDELKR+GFKPLSLRGNPAAQASLLLGMFPWKGYTLV
Sbjct: 361 CEIRNIIAVGGPKRTGEVKVERWGDELKRVGFKPLSLRGNPAAQASLLLGMFPWKGYTLV 420

Query: 421 EENGCLKLGWKDLSLLTASAWQP 444
           EENGCLKLGWKDLSLLTASAWQP
Sbjct: 421 EENGCLKLGWKDLSLLTASAWQP 442

[Close]

BLAST of CsaV3_4G007400 vs. TrEMBL
Match: tr|A0A1R3H6D2|A0A1R3H6D2_COCAP (Transcription factor GRAS OS=Corchorus capsularis OX=210143 GN=CCACVL1_21361 PE=3 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 3.7e-198
Identity = 348/445 (78.20%), Postives = 393/445 (88.31%), Query Frame = 0


Query: 1   MLRSLIPHSPINSTSNNSP-SSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXX 60
           ML+SL+P SPINS  +++P SSMKSKR+D     D + +T  DSS D P +KR N     
Sbjct: 1   MLQSLVPQSPINSNPSSNPNSSMKSKRADR----DVSAATGDDSSADDPSTKRPNFSSGD 60

Query: 61  XXXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPE 120
                       +  +STGLRLLGLLLQCAECVA+DNL +A DLLPEISELSSPFG+SPE
Sbjct: 61  KTVADEQEETVIE-GESTGLRLLGLLLQCAECVAMDNLDDATDLLPEISELSSPFGSSPE 120

Query: 121 RVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTAN 180
           RVGAYFAHALQARV+SSCL TYSPL  ++L  TQSQ+IFNALQSYNSISPL+KFSHFTAN
Sbjct: 121 RVGAYFAHALQARVVSSCLRTYSPLDTKSLTLTQSQKIFNALQSYNSISPLVKFSHFTAN 180

Query: 181 QAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGR 240
           QAIFQALDG+DRVHVIDLD+MQGLQWPGLFHILASR KKI+S+RI+GFGSSS+LL+STGR
Sbjct: 181 QAIFQALDGQDRVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLESTGR 240

Query: 241 RLADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLR 300
           RLADFATSLGLPFEFHP+EGKIGN+T+  QL ++S EAVVVHWMHHCLYD+TGSD+GTLR
Sbjct: 241 RLADFATSLGLPFEFHPLEGKIGNVTDLSQLGVQSSEAVVVHWMHHCLYDITGSDLGTLR 300

Query: 301 LLSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLF 360
           LL+ LKPK+ITIVEQDLSHGGSFLGRFVEALHYYSALFDALGD LG+DS+ERH+VEQQLF
Sbjct: 301 LLTLLKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDGLGVDSLERHMVEQQLF 360

Query: 361 GCEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTL 420
           G EIRNI+AVGGPKRTGEVKVERWG+EL+R+GF+P+SL GNPAAQASLLLGMFPWKGYTL
Sbjct: 361 GSEIRNIVAVGGPKRTGEVKVERWGEELRRVGFRPVSLGGNPAAQASLLLGMFPWKGYTL 420

Query: 421 VEENGCLKLGWKDLSLLTASAWQPT 445
           VEENGCLKLGWKDLSLLTASAWQP+
Sbjct: 421 VEENGCLKLGWKDLSLLTASAWQPS 440

[Close]

BLAST of CsaV3_4G007400 vs. TrEMBL
Match: tr|A0A1R3KKR7|A0A1R3KKR7_9ROSI (Transcription factor GRAS OS=Corchorus olitorius OX=93759 GN=COLO4_07161 PE=3 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 4.8e-198
Identity = 348/445 (78.20%), Postives = 393/445 (88.31%), Query Frame = 0


Query: 1   MLRSLIPHSPINSTSNNSP-SSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXX 60
           ML+SL+P SPINS   ++P SSMKSKR+D     D + +TA DSS D P +KR N     
Sbjct: 1   MLQSLVPQSPINSNPTSNPNSSMKSKRADR----DVSAATADDSSADDPSTKRPNFSSGD 60

Query: 61  XXXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPE 120
                       +  +STGLRLLGLLLQCAECVA+DNL++A DLLPEISELSSPFG+SPE
Sbjct: 61  KTVADEQEETVIE-GESTGLRLLGLLLQCAECVAMDNLEDATDLLPEISELSSPFGSSPE 120

Query: 121 RVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTAN 180
           RVGAYFAHALQARV+SSCL TYSPL  ++L  TQSQ+IFNALQSYNSISPL+KFSHFTAN
Sbjct: 121 RVGAYFAHALQARVVSSCLRTYSPLDTKSLTLTQSQKIFNALQSYNSISPLVKFSHFTAN 180

Query: 181 QAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGR 240
           QAIFQALDG+DRVHVIDLD+MQGLQWPGLFHILASR KKI+S+RI+GFGSSS+LL+STGR
Sbjct: 181 QAIFQALDGQDRVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLESTGR 240

Query: 241 RLADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLR 300
           RLADFATSLGLPFEFHP+EGKIGN+T+  QL ++S EAVVVHWMHHCLYD+TGSD+GTLR
Sbjct: 241 RLADFATSLGLPFEFHPLEGKIGNVTDLSQLGVQSSEAVVVHWMHHCLYDITGSDLGTLR 300

Query: 301 LLSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLF 360
           LL+ LKPK+ITIVEQDLSHGGSFLGRFVEALHYYSALFDALGD LG+DS+ERH+VEQQLF
Sbjct: 301 LLTLLKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDGLGVDSLERHMVEQQLF 360

Query: 361 GCEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTL 420
           G EIRNI+AVGGPKRTGEVKVERWG+EL+R+GF+P+SL GNPAAQASLLLGMFPWKGYTL
Sbjct: 361 GSEIRNIVAVGGPKRTGEVKVERWGEELRRVGFRPVSLGGNPAAQASLLLGMFPWKGYTL 420

Query: 421 VEENGCLKLGWKDLSLLTASAWQPT 445
           VEE GCLKLGWKDLSLLTASAWQP+
Sbjct: 421 VEETGCLKLGWKDLSLLTASAWQPS 440

[Close]

BLAST of CsaV3_4G007400 vs. TrEMBL
Match: tr|A0A061DTB2|A0A061DTB2_THECC (SCL domain class transcription factor OS=Theobroma cacao OX=3641 GN=TCM_002021 PE=3 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 1.6e-196
Identity = 345/445 (77.53%), Postives = 392/445 (88.09%), Query Frame = 0


Query: 1   MLRSLIPHSPINSTSNNSP-SSMKSKRSDHHLDPDSNPSTAADSSPDHPPSKRLNSCHXX 60
           ML+SL+P SPINS  +++P SSMKSKR    ++ D + +T   SS D P +KR N     
Sbjct: 1   MLQSLVPQSPINSNPSSNPNSSMKSKR----VERDVSAATGDHSSADDPSTKRPNFSSGD 60

Query: 61  XXXXXXXXXXXXDPTDSTGLRLLGLLLQCAECVAIDNLQEANDLLPEISELSSPFGTSPE 120
                       +  +STGLRLLGLLLQCAECVA+DNL++A DLLPEISELSSPFG+SPE
Sbjct: 61  KTAADEQEDTVIE-GESTGLRLLGLLLQCAECVAMDNLEDATDLLPEISELSSPFGSSPE 120

Query: 121 RVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTAN 180
           RVGAYFAHALQARV+SSCL  YSPL  ++L  TQSQ+IFNALQSYNSISPL+KFSHFTAN
Sbjct: 121 RVGAYFAHALQARVVSSCLRAYSPLDTKSLTLTQSQKIFNALQSYNSISPLVKFSHFTAN 180

Query: 181 QAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGR 240
           QAIFQALDGEDRVHVIDLD+MQGLQWPGLFHILASR KKI+S+RI+GFGSSS+LL+STGR
Sbjct: 181 QAIFQALDGEDRVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLESTGR 240

Query: 241 RLADFATSLGLPFEFHPVEGKIGNLTNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLR 300
           RLADFATSLGLPFEFHP+EGKIGN+T+  QL ++S EAVVVHWMHHCLYD+TGSD+GTLR
Sbjct: 241 RLADFATSLGLPFEFHPLEGKIGNVTDLSQLGVQSSEAVVVHWMHHCLYDITGSDLGTLR 300

Query: 301 LLSTLKPKIITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSIERHVVEQQLF 360
           LL+ +KPK+ITIVEQDLSHGGSFLGRFVEALHYYSALFDALGD LG+DS+ERH+VEQQLF
Sbjct: 301 LLTLVKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDGLGVDSLERHMVEQQLF 360

Query: 361 GCEIRNIIAVGGPKRTGEVKVERWGDELKRLGFKPLSLRGNPAAQASLLLGMFPWKGYTL 420
           G EIRNI+AVGGPKRTGEVKVERWG+EL+R+GF+P+SL GNPAAQASLLLGMFPWKGYTL
Sbjct: 361 GSEIRNIVAVGGPKRTGEVKVERWGEELRRVGFRPVSLGGNPAAQASLLLGMFPWKGYTL 420

Query: 421 VEENGCLKLGWKDLSLLTASAWQPT 445
           VEENGCLKLGWKDLSLLTASAWQP+
Sbjct: 421 VEENGCLKLGWKDLSLLTASAWQPS 440

The following BLAST results are available for this feature:

BLAST of CsaV3_4G007400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147738.1	1.0e-247	100.00	PREDICTED: scarecrow-like protein 23 [Cucumis sativus] >KGN53498.1 hypothetical ...	[more]
XP_022980905.1	1.8e-212	84.92	scarecrow-like protein 23 [Cucurbita maxima] >XP_023552635.1 scarecrow-like prot...	[more]
XP_022942296.1	4.0e-212	84.70	scarecrow-like protein 23 [Cucurbita moschata]	[more]
XP_008451856.1	5.2e-212	88.94	PREDICTED: scarecrow-like protein 23 [Cucumis melo]	[more]
OMO65883.1	5.6e-198	78.20	Transcription factor GRAS [Corchorus capsularis]	[more]

BLAST of CsaV3_4G007400 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41920.1	1.6e-146	70.00	GRAS family transcription factor	[more]
AT3G54220.1	2.5e-139	64.50	GRAS family transcription factor	[more]
AT3G03450.1	3.3e-59	37.20	RGA-like 2	[more]
AT1G63100.1	6.2e-58	35.96	GRAS family transcription factor	[more]
AT1G66350.1	7.6e-56	34.75	RGA-like 1	[more]

BLAST of CsaV3_4G007400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FHZ1\|SCL23_ARATH	2.9e-145	70.00	Scarecrow-like protein 23 OS=Arabidopsis thaliana OX=3702 GN=SCL23 PE=1 SV=1	[more]
sp\|Q9M384\|SCR_ARATH	4.4e-138	64.50	Protein SCARECROW OS=Arabidopsis thaliana OX=3702 GN=SCR PE=1 SV=1	[more]
sp\|Q2Z2E9\|SCR_IPONI	1.5e-133	62.30	Protein SCARECROW OS=Ipomoea nil OX=35883 GN=SCR PE=1 SV=1	[more]
sp\|Q9AVK4\|SCR_PEA	3.3e-133	62.19	Protein SCARECROW OS=Pisum sativum OX=3888 GN=SCR PE=2 SV=1	[more]
sp\|Q9FUZ7\|SCR_MAIZE	3.8e-129	62.84	Protein SCARECROW OS=Zea mays OX=4577 GN=SCR PE=2 SV=1	[more]

BLAST of CsaV3_4G007400 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVE6\|A0A0A0KVE6_CUCSA	6.6e-248	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G061850 PE=3 SV=1	[more]
tr\|A0A1S3BTL2\|A0A1S3BTL2_CUCME	3.4e-212	88.94	scarecrow-like protein 23 OS=Cucumis melo OX=3656 GN=LOC103493019 PE=3 SV=1	[more]
tr\|A0A1R3H6D2\|A0A1R3H6D2_COCAP	3.7e-198	78.20	Transcription factor GRAS OS=Corchorus capsularis OX=210143 GN=CCACVL1_21361 PE=...	[more]
tr\|A0A1R3KKR7\|A0A1R3KKR7_9ROSI	4.8e-198	78.20	Transcription factor GRAS OS=Corchorus olitorius OX=93759 GN=COLO4_07161 PE=3 SV...	[more]
tr\|A0A061DTB2\|A0A061DTB2_THECC	1.6e-196	77.53	SCL domain class transcription factor OS=Theobroma cacao OX=3641 GN=TCM_002021 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005202	TF_GRAS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0090610	bundle sheath cell fate specification
biological_process	GO:0048366	leaf development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G007400.1	CsaV3_4G007400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 83..442 e-value: 1.3E-115 score: 386.3
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 72..442 score: 84.876
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..50
None	No IPR available	PANTHER	PTHR31636:SF35	SCARECROW-LIKE PROTEIN 23	coord: 18..443
None	No IPR available	PANTHER	PTHR31636	FAMILY NOT NAMED	coord: 18..443

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G007400	CSPI04G07170	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G007400	Cucsa.180010	Cucumber (Gy14) v1	cgycucB289
CsaV3_4G007400	CmaCh04G006140	Cucurbita maxima (Rimu)	cmacucB0841
CsaV3_4G007400	CmoCh04G006610	Cucurbita moschata (Rifu)	cmocucB0827
CsaV3_4G007400	Cp4.1LG01g00980	Cucurbita pepo (Zucchini)	cpecucB0496
CsaV3_4G007400	CsGy4G007080	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G007400	Carg13129	Silver-seed gourd	carcucB0052
CsaV3_4G007400	Cla005438	Watermelon (97103) v1	cucwmB323
CsaV3_4G007400	MELO3C016202	Melon (DHL92) v3.5.1	cucmeB317
CsaV3_4G007400	ClCG07G010900	Watermelon (Charleston Gray)	cucwcgB343
CsaV3_4G007400	Lsi07G008000	Bottle gourd (USVL1VR-Ls)	cuclsiB323
CsaV3_4G007400	MELO3C016202.2	Melon (DHL92) v3.6.1	cucmedB309
CsaV3_4G007400	Cla97C07G137630	Watermelon (97103) v2	cucwmbB329
CsaV3_4G007400	Bhi01G002383	Wax gourd	cucwgoB370

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G007400	Cucumber (Chinese Long) v3	cuccucB166
CsaV3_4G007400	Silver-seed gourd	carcucB0689
CsaV3_4G007400	Cucumber (Gy14) v2	cgybcucB176
CsaV3_4G007400	Cucurbita maxima (Rimu)	cmacucB0393
CsaV3_4G007400	Cucurbita moschata (Rifu)	cmocucB0388
CsaV3_4G007400	Cucurbita moschata (Rifu)	cmocucB0560
CsaV3_4G007400	Cucurbita pepo (Zucchini)	cpecucB0266
CsaV3_4G007400	Wild cucumber (PI 183967)	cpicucB226
CsaV3_4G007400	Bottle gourd (USVL1VR-Ls)	cuclsiB317
CsaV3_4G007400	Watermelon (Charleston Gray)	cucwcgB295