CsaV3_4G007200 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAGGGTTGTTTTCCGCTGCTGCGGTTCCTGGGTTTGGAGCCTTTTGGCTTGATGTTGCCATTGACTGGAGCAAAAGGTTGGTTGGAACTCTCTTTTGACAAGAAGATCCCTGCTCCTTGCAAGATCGATTCTTGACCAGAGTACTTATTCTCCTGAGTAGAGTAGATTGGAGAGAGGCTGTATAATGTATTTGGCACTGATTGGTCAGTGGCCCTTTAATCTTATCGGAGTTCTTTTGTACTTCTTATTTTCTGTGGACTACTTCTAAAATATTTTCTTAACTATTTCTGGCAAAATGTTTGTCCTACTAGAGGTCTGTCGTGCTTTTACGACTCAGTCTTAGTTATCTCCTCATCTCTTGTAGTTTCAGGAAAGTACTTGTCACAGATCAAGTCCTTAAATTATACCTCTAGTGATTAGTATTCTCGTCATGTATTGTGGTACAGGGGTTGCACTCCTCCACTTAGTTAAGGATCTGGCTTGTACCACTTGTTTGGTCTAATGGCTTGAGCATCGTTTGCTTAGAAATAGGCTAATGGGGAACATCCTGTTCCAATAGTAGCTAAACATTTAACTTCATGTAAAACAATGATGTTGATGTGTAGCATGACTATTGCATATCTCACGATGGAGCAAGATAATCAAGTTGCTGGGCTTAATGATCAATTTTATTTTTCATTGACAAACAGTCTGCAGGGAGTCTATTCTGCATTAATTTAAGTTGAATTAGAACTTAGAACTTTCAATCATATCTGACGTTTGGGATCTCTGTAAAGGACCCTAGATGGAGAAAGCAGGTGGTTGACAGGCTGTTTCAAAGGCAGAAGCTAGGTTATTTATTATTATTTTTAGGACAATGAATGCATTAGTTTAAATGTGCCTCTTAGGTTCCCATACCATAGAAGTGTTTGAAATGCTGTCACACATGCTAAGGATATGCTGTAAAAGGGCTATGGACATTGGACCTATGGCAAACAAGAAAATATATGAAAGCTAAAAACTTGATTTACAGTCCCAATTAGATGAGGAAAATATTTCAAGTAGCAGTAGGAATCTCAAAATTTGACATTTATGGAATGGTAACTCACAATTTTTAGTTCATTACAAAATAAAGACCTGAAGTGAGAGAGAAAGTTACCTGTTAAACCATTTAAGAGAGACTTTGCTTGTAAACATTTGTATGGCTTAATCATTCACGCGTGTCTATAACTTCTATTGATCAACACCAGCATTTTGATTTGTATAACTAATGTGTGACCTTTTTGCTTCAGTGATAAATTTTTTTTGGCTATCTTGTTTCATGTGTGAGGAGCTGCTTCGTTTCTCTTGTAACTTATTATTTTTTTTTGTATAATCAAGTCAAATAGGGACTTCAATAGCACATTATTGCATGCAGATTCTAACTAATGGGAAGTGCAAGAGTGCGGAACATAGGGTGATTACAAATTCTAGCAGGGCAAGACTCTCGATTTCTGCTTTTCATGATCCGCCGAAGACAGTAAAAATATCCCCTGCTGCAGAACTTGTTAGTGAGTCCTCCCCCCTTAGATATCGCGAAGTTATTTATGGAGATTATACATCATCATGGTACTCGAACGGCCCTGAAGGAAGAAGAAATCTGGATGCAGTCAAGCTTCACAACTAG ATGCTAGGGTTGTTTTCCGCTGCTGCGGTTCCTGGGTTTGGAGCCTTTTGGCTTGATGTTGCCATTGACTGGAGCAAAAGTCAAATAGGGACTTCAATAGCACATTATTGCATGCAGATTCTAACTAATGGGAAGTGCAAGAGTGCGGAACATAGGGTGATTACAAATTCTAGCAGGGCAAGACTCTCGATTTCTGCTTTTCATGATCCGCCGAAGACAGTAAAAATATCCCCTGCTGCAGAACTTGTTAGTGAGTCCTCCCCCCTTAGATATCGCGAAGTTATTTATGGAGATTATACATCATCATGGTACTCGAACGGCCCTGAAGGAAGAAGAAATCTGGATGCAGTCAAGCTTCACAACTAG ATGCTAGGGTTGTTTTCCGCTGCTGCGGTTCCTGGGTTTGGAGCCTTTTGGCTTGATGTTGCCATTGACTGGAGCAAAAGTCAAATAGGGACTTCAATAGCACATTATTGCATGCAGATTCTAACTAATGGGAAGTGCAAGAGTGCGGAACATAGGGTGATTACAAATTCTAGCAGGGCAAGACTCTCGATTTCTGCTTTTCATGATCCGCCGAAGACAGTAAAAATATCCCCTGCTGCAGAACTTGTTAGTGAGTCCTCCCCCCTTAGATATCGCGAAGTTATTTATGGAGATTATACATCATCATGGTACTCGAACGGCCCTGAAGGAAGAAGAAATCTGGATGCAGTCAAGCTTCACAACTAG MLGLFSAAAVPGFGAFWLDVAIDWSKSQIGTSIAHYCMQILTNGKCKSAEHRVITNSSRARLSISAFHDPPKTVKISPAAELVSESSPLRYREVIYGDYTSSWYSNGPEGRRNLDAVKLHN
BLAST of CsaV3_4G007200 vs. NCBI nr
Match: XP_004147727.1 (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 [Cucumis sativus] >XP_011653246.1 PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 [Cucumis sativus] >KGN53476.1 hypothetical protein Csa_4G056660 [Cucumis sativus]) HSP 1 Score: 169.9 bits (429), Expect = 5.5e-39 Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. NCBI nr
Match: XP_008451879.1 (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 isoform X1 [Cucumis melo]) HSP 1 Score: 164.5 bits (415), Expect = 2.3e-37 Identity = 79/83 (95.18%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. NCBI nr
Match: XP_022931353.1 (probable 2-oxoglutarate-dependent dioxygenase ANS isoform X1 [Cucurbita moschata] >XP_022931354.1 probable 2-oxoglutarate-dependent dioxygenase ANS isoform X1 [Cucurbita moschata] >XP_022931355.1 probable 2-oxoglutarate-dependent dioxygenase ANS isoform X1 [Cucurbita moschata] >XP_022931356.1 probable 2-oxoglutarate-dependent dioxygenase ANS isoform X2 [Cucurbita moschata]) HSP 1 Score: 163.3 bits (412), Expect = 5.2e-37 Identity = 77/83 (92.77%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. NCBI nr
Match: XP_022985093.1 (probable 2-oxoglutarate-dependent dioxygenase ANS [Cucurbita maxima] >XP_022985094.1 probable 2-oxoglutarate-dependent dioxygenase ANS [Cucurbita maxima] >XP_022985095.1 probable 2-oxoglutarate-dependent dioxygenase ANS [Cucurbita maxima]) HSP 1 Score: 163.3 bits (412), Expect = 5.2e-37 Identity = 77/83 (92.77%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. NCBI nr
Match: XP_022136480.1 (probable 2-oxoglutarate-dependent dioxygenase ANS [Momordica charantia] >XP_022136481.1 probable 2-oxoglutarate-dependent dioxygenase ANS [Momordica charantia] >XP_022136482.1 probable 2-oxoglutarate-dependent dioxygenase ANS [Momordica charantia]) HSP 1 Score: 154.1 bits (388), Expect = 3.1e-34 Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TAIR10
Match: AT4G16330.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 107.8 bits (268), Expect = 4.7e-24 Identity = 48/79 (60.76%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TAIR10
Match: AT3G21420.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 75.5 bits (184), Expect = 2.6e-14 Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TAIR10
Match: AT3G12900.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11 Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TAIR10
Match: AT2G38240.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11 Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TAIR10
Match: AT3G13610.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 63.5 bits (153), Expect = 1.0e-10 Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. Swiss-Prot
Match: sp|O80449|DIOX4_ARATH (Probable 2-oxoglutarate-dependent dioxygenase ANS OS=Arabidopsis thaliana OX=3702 GN=ANS PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.8e-10 Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. Swiss-Prot
Match: sp|D4N501|DIOX2_PAPSO (Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum OX=3469 GN=DIOX2 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.2e-10 Identity = 28/83 (33.73%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. Swiss-Prot
Match: sp|A2A1A0|NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica OX=3442 GN=NCS1 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09 Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. Swiss-Prot
Match: sp|Q9LHN8|F6H1_ARATH (Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana OX=3702 GN=F6'H1 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09 Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. Swiss-Prot
Match: sp|Q9FFF6|DIOX5_ARATH (Probable 2-oxoglutarate-dependent dioxygenase At5g05600 OS=Arabidopsis thaliana OX=3702 GN=At5g05600 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.3e-09 Identity = 29/79 (36.71%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TrEMBL
Match: tr|A0A0A0L036|A0A0A0L036_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056660 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 3.6e-39 Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TrEMBL
Match: tr|A0A1S3BTN2|A0A1S3BTN2_CUCME (1-aminocyclopropane-1-carboxylate oxidase 5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493039 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.5e-37 Identity = 79/83 (95.18%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TrEMBL
Match: tr|A0A1Q3C1G5|A0A1Q3C1G5_CEPFO (2OG-FeII_Oxy domain-containing protein/DIOX_N domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_17586 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 5.5e-27 Identity = 58/81 (71.60%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TrEMBL
Match: tr|V4T0K5|V4T0K5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012063mg PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.5e-26 Identity = 60/81 (74.07%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TrEMBL
Match: tr|A0A2H5MX43|A0A2H5MX43_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_003030 PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.5e-26 Identity = 60/81 (74.07%), Postives = 71/81 (87.65%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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