CsaV3_4G006410 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTTTTCTTCTCAATATTTATTCAAAAGTTAAACATCACTTTCAAAAACTAAAAACCCTTTTTTTAGCCAACAAAAAGTTAAAACTCTCAAACCATACATTTGACTCATTCATAGAAAATAATTTTGAAAAGTGGAATGAATAATTAAATTTAGAAATTATGCCAAAAATCTACAAAAAGCAATTTCGGAGCGTAACGGCGAGGAAAACAGTGCGGCCTCGCCATAACCATATTCAAAATATCGTTTCACGTTTTTTTGTCCGATAAACCTGCGAGATTGGACTCCTTGGGTTCGTTCGTAATTTTATAAAAATGAGAGGGCAGATGTGCGAAAGAAGCGCTAAACTTTCCATCTCCCCGGAAAGACAGAGGACGACACCATCGGATTAATAAATAAATAAAATTAATTAATTAATTAAAAATAGCAAATTTAGAAAGAAATTAAATTTTATTTTTTCCATTTCGTCTTCTGTCTCTATTTAAGTTCTGTTTTACGTTTTCTTCTGTTTTCTTTTTCTTTTTCTTTTTTCCCCTCTCTCTCTTTAAAAAAACCTTTTCTCTTTTTCCTTTATAGATTCATTGCGTGAAAAAGTCAGAATCAAATTCCAGGTAATTTTCACTTTTTTAACCCAATGAATCTCTGTTTCTTCCTTGTGATCATTTGAAATGGTTGATGATATATGATGGAATGAGTTTGTAATGTTTTAGATCTATTATCATTTTTTAATCTCTACTTATCATAATTATGTTATACTCTCCAAAACTCTGAATCGAAATTGCATTGGTAGTTCTTTATTTATTTATTTTTTTTGGAATTTGTAGTGTTGTTCATTTGTTTTTTTAATTTTGGCAGCCAAACAGAATCCAGCTCAATTTCCCATTTTCCATTTACTGTCTGAGATGTTGATTGATTGGTTTTTGATCTGTCATTAGAATTGTTGCATTTAATATTAATCTTTGCTATTTAAAGTTTTCTTCTCTCTTTTTAATATTCATACGAGTGTTTCAATCTCATTTATCTACGTATCTAGAAAGTTCAAAGACTTTTTCTTGTGGATTGAATTGAACCGTTGAGTTATTCAAAAACATTGTTAGATTATACTAACATTCTGATTACATATATTCAAGCCTACCACTAGCTTATAACTCTTTATTAATTATCCACTCTAACATAATTTTCAAATAATTAGAGAAGATTTAGATATTCATGATGGAATTGGAATAATAATATTAAACTCTATCTTTCCCCTTTTCAAAATTTAAAACAATAAATATAGATAGTTTGAAAAATTCTAAAATTTTGCTTTACAAATATTTCCCTCATTTTCTTATGTGATTTTAGTATAGAAATTTTGGATAATTATAATAGGTAGCGATTTGAGAAAAAATAATTAAATATATAACATTATTTTTTAAAAATTGTAAATATACGGATAAACTTTTGTAGTTGATATATACAGATAAACTTTATTCTATATTTACAACATTTAGAAAATTTTACTATATGTGTTAATATTTTAAATCTAATAGCTATATTTTCGACTTTAGTTAATATTATTTTTCCATTCCAATGTATTTTTAATGTTTCTTTTTTCTGTTTTTTTTTCCAAATGTATGTTTCACCAAAAATATGTGTAAGATATAAACTTGTCCCTAGTGTACTATCACTTTGCTATTTACCTAATTTTCCCAAGAAATATTATTTGAAAAAAGAAAAACTAATAAAGGGAATTTGAGAGTAGTACTCTATATTATTCAAAGCTAACTATTTTGGTGTGGGCATAGGGTTATGGGTGTGGAGAGAGGGTTGTTTGGTATATGTTTGGGGTAGGGGTTATTGAATAATAATCCAAGTTGAAGATAGTGAATCTTATTATTTGTTTTAGCAATGACAAATTTTGAGTTATTATTAGGAGGGTAGGGGAACCATACTATGTTAGAGAAATTATTCATAAATGTGTGTGTATATATATATATATATATATGGGTATGACATAGGTAAGCTAGGCCTCTTATCTTTTTTAAAAATGTATATTTTGTGTGGCGATGAAAGTGGACAAATTGGCGAAGTTGGAAGTTAATAGCACAATGGAAAATAATGCATCAAATAAGTCACTATTATGACATTTTATTGTGCAAGTTGAATTTGACTTTTTTTTTTTCATCATCTAATTATGAAAAATAATTCATGTAGAAGAAAAACTAGAATATTGGTATGAGTAGCATGCATGACACTAGCCACACACACTCTTTGAAAATTTTCACCTATAGTCTTACTTGAATATTCTATTTGTAAATAAAAATTAGGATTGAGATTTGAGGAGATGATGAAGCATCGCATGCGAAAAGGATTAACGGACTCTAACGTAATCAATTTAAAATCGGATGAAATTACTGAACAACAGAAGATGACTAAAGCAGGTATAGTTTCTATTTTTTTTAATATAATATTTATGAGATTTGAGGACCTCTCATTTTAGAGACGGGGAGTCATGCTAGCAACAACTTAGACCTAAAATGAATTTGGACTAAAAATTTTCTTAATATCTTATTCTCTTTTAATGTGTTTATGTGAAAGATTTTAATTAAATTAAAAGTATAGTTTCTACGCTCTTGTATTTGTTTCTGTTTAGACAAGGTTGTTTGTATCTTTCAAACTTAACCACATCACGTTTTTTTATGACAAATAAAATTGTAGCCTTCGTTGTGTTTTGTTATCATAAGTTAGTAAATTATTTACTCTCTGACAATTGTTCTTCAAAACTATAGTGCATGATGAAATGTGGAACAAATAAAACTCATTACTTGTGGCTTTCTTCTTTTTGTTTTTGTTTTAAGATTACATTTTCTTCTTAACAAGAAAACAAACTGTTTAATTTTCAGAAATGGAACAAAAGATGATGAGAATCTTGAAGCTAATGAAGAACAAAGATCAAGGAAAAAGTAGAGGAATGCCAAAGGACTCAAAGAAAGAAACGGAAGTTGTTGGCCTTGTTGAGGATTTATACAAAAGTTACCAGTCGATTTATGAACAATATGGTCATCTACGAGATGAAGCTGAAAGAATCTTTAATTCCAAAAGTGAAGACGAAGAGGACAAGGAAGATGTCTCTTCTTCATCTTCAAGCTCTAATTCTGATTCCGATTTAGAATATTTTTCGTCCGAGGAAGTAAACACCAACAACGTTCATAATTTACAGGATGAACGCTCAAACAACTTCCATGCTCAAATTCAAGCAGATGAGCTAGAAAAGCAAATTGTACAAAAGAATGAAGCCTTGGCTAAGGTTGATTTTCTGCATCGAGAACTAGATAGTGTACGAAGCCAGAAACGCGAATTGGAAAATAGGAAAAACAAGGAGATATCTGAGAATATGGCTTTGATAGTTAATTTGAAACAAGAAATATCGAAAAAGATTGGACTTGAACAGAAGATTCTGGAAGACAAAGAGAGAGTTCTTGATCGGATAAAGGAGCTGGAAACGGAATTAGACACTCTACATTACCGAAGAAGGGAAATAGAAGAACAAAATATTCGAATGAGATCCGAAAATCAATGGCTAAACACTAAGAATTCTGAATTGGAGATGGCATTGACGAGTAAAGAAACGGAAGCTTCTTCTCAGACGATCGCATTGATGGAGCAAGTCAAGAATCTAAAACATAAAGTGGATGGATCGCAGGCTGAAAAAACCAAATTAGAGCAAGAAATGGAGCGATATAAACAAGAATTTTCTCACAAATTCTCTGAAATGGAGGCAGAAAACAACAGATTGAAAAGCAAAATTGTCGATCAGGAAAGAATCCTAAAAGAAAAGGACGAAACAATAATCACATTTAACGAGAAATACAAGCAAGCAAGAAATTGCTTACCCGACGTCGCTTCGAGTCTGGTAAGCACAGAGAGAAAAATGGAAGAGTTAGCAGAAGAGCTCCGAAGCGGCCTAGAAGATAAAATCCGTATACTATCTCAGAGAATTCTCGTAGCAGAGCAACTACACAATGAAAGCAGAGAAAGCTTCAGAACAAGAAACAAAAGACACGAACAAGAGAAGAGACAGTTTGAACAAAAAATAGTAAATCACGAAGCAGAACTGATGAAACTGGGCAACATGAACGAATTCGGAATGGACAGAATGGCAAGAAAATTCGAAGAAGAGAGTGCGAAGCTTCTAAATCATATACTATGGATCACAAAGGAGCTTACATTCGCAAAATATTGGGTTAGAACGCGAAACAACGAGTTAAAACAACTGAAAACAAATTTAACTCGATTCGTTGCTCAAATGGAGGAAAAAGAAGAACAAGAGTTCTTGTTAAGAGAGAAACTATGGAATCTAGAGGCGAAAATAAGCAAAGAGGGAGGAGAGAAACTGAATCTGATCAGAACGTTAGGACAATTCGAGAAGAAGATGACGAAAATGGAGAATATACTGAAGGAGAAAGATGAAGAAGTGTTCCGACTTGCCGAAGAGAAGAGAGAAGTAATTCGACAACTATGCGTTGTGATTGATCACCATCGAAGCCGCTACGATCAGCTCAAAGACGTCATGCTCGAAAAGGTCAGAAACAATAGAATGATTTGAGGCTAATTGTTTTTGTTACAACTATCATTTATTTTACACATATATATTGTGTTGAAAAATTTTGGTAAATGTAAAAGAACTATGTAACAAAATATATACATTACATTACACACATAACATTGTTTTATAAATTTTGAGCATAAAATTTTCTTCAATTTTGTCCCACTTTTACATCATTCCATATCTCAAGTTTATTTCAAATGTAAAAATGAGGTTTCATTGTCTCCCTTCACTTGTG ATGATGAAGCATCGCATGCGAAAAGGATTAACGGACTCTAACGTAATCAATTTAAAATCGGATGAAATTACTGAACAACAGAAGATGACTAAAGCAGAAATGGAACAAAAGATGATGAGAATCTTGAAGCTAATGAAGAACAAAGATCAAGGAAAAAGTAGAGGAATGCCAAAGGACTCAAAGAAAGAAACGGAAGTTGTTGGCCTTGTTGAGGATTTATACAAAAGTTACCAGTCGATTTATGAACAATATGGTCATCTACGAGATGAAGCTGAAAGAATCTTTAATTCCAAAAGTGAAGACGAAGAGGACAAGGAAGATGTCTCTTCTTCATCTTCAAGCTCTAATTCTGATTCCGATTTAGAATATTTTTCGTCCGAGGAAGTAAACACCAACAACGTTCATAATTTACAGGATGAACGCTCAAACAACTTCCATGCTCAAATTCAAGCAGATGAGCTAGAAAAGCAAATTGTACAAAAGAATGAAGCCTTGGCTAAGGTTGATTTTCTGCATCGAGAACTAGATAGTGTACGAAGCCAGAAACGCGAATTGGAAAATAGGAAAAACAAGGAGATATCTGAGAATATGGCTTTGATAGTTAATTTGAAACAAGAAATATCGAAAAAGATTGGACTTGAACAGAAGATTCTGGAAGACAAAGAGAGAGTTCTTGATCGGATAAAGGAGCTGGAAACGGAATTAGACACTCTACATTACCGAAGAAGGGAAATAGAAGAACAAAATATTCGAATGAGATCCGAAAATCAATGGCTAAACACTAAGAATTCTGAATTGGAGATGGCATTGACGAGTAAAGAAACGGAAGCTTCTTCTCAGACGATCGCATTGATGGAGCAAGTCAAGAATCTAAAACATAAAGTGGATGGATCGCAGGCTGAAAAAACCAAATTAGAGCAAGAAATGGAGCGATATAAACAAGAATTTTCTCACAAATTCTCTGAAATGGAGGCAGAAAACAACAGATTGAAAAGCAAAATTGTCGATCAGGAAAGAATCCTAAAAGAAAAGGACGAAACAATAATCACATTTAACGAGAAATACAAGCAAGCAAGAAATTGCTTACCCGACGTCGCTTCGAGTCTGGTAAGCACAGAGAGAAAAATGGAAGAGTTAGCAGAAGAGCTCCGAAGCGGCCTAGAAGATAAAATCCGTATACTATCTCAGAGAATTCTCGTAGCAGAGCAACTACACAATGAAAGCAGAGAAAGCTTCAGAACAAGAAACAAAAGACACGAACAAGAGAAGAGACAGTTTGAACAAAAAATAGTAAATCACGAAGCAGAACTGATGAAACTGGGCAACATGAACGAATTCGGAATGGACAGAATGGCAAGAAAATTCGAAGAAGAGAGTGCGAAGCTTCTAAATCATATACTATGGATCACAAAGGAGCTTACATTCGCAAAATATTGGGTTAGAACGCGAAACAACGAGTTAAAACAACTGAAAACAAATTTAACTCGATTCGTTGCTCAAATGGAGGAAAAAGAAGAACAAGAGTTCTTGTTAAGAGAGAAACTATGGAATCTAGAGGCGAAAATAAGCAAAGAGGGAGGAGAGAAACTGAATCTGATCAGAACGTTAGGACAATTCGAGAAGAAGATGACGAAAATGGAGAATATACTGAAGGAGAAAGATGAAGAAGTGTTCCGACTTGCCGAAGAGAAGAGAGAAGTAATTCGACAACTATGCGTTGTGATTGATCACCATCGAAGCCGCTACGATCAGCTCAAAGACGTCATGCTCGAAAAGGTCAGAAACAATAGAATGATTTGA ATGATGAAGCATCGCATGCGAAAAGGATTAACGGACTCTAACGTAATCAATTTAAAATCGGATGAAATTACTGAACAACAGAAGATGACTAAAGCAGAAATGGAACAAAAGATGATGAGAATCTTGAAGCTAATGAAGAACAAAGATCAAGGAAAAAGTAGAGGAATGCCAAAGGACTCAAAGAAAGAAACGGAAGTTGTTGGCCTTGTTGAGGATTTATACAAAAGTTACCAGTCGATTTATGAACAATATGGTCATCTACGAGATGAAGCTGAAAGAATCTTTAATTCCAAAAGTGAAGACGAAGAGGACAAGGAAGATGTCTCTTCTTCATCTTCAAGCTCTAATTCTGATTCCGATTTAGAATATTTTTCGTCCGAGGAAGTAAACACCAACAACGTTCATAATTTACAGGATGAACGCTCAAACAACTTCCATGCTCAAATTCAAGCAGATGAGCTAGAAAAGCAAATTGTACAAAAGAATGAAGCCTTGGCTAAGGTTGATTTTCTGCATCGAGAACTAGATAGTGTACGAAGCCAGAAACGCGAATTGGAAAATAGGAAAAACAAGGAGATATCTGAGAATATGGCTTTGATAGTTAATTTGAAACAAGAAATATCGAAAAAGATTGGACTTGAACAGAAGATTCTGGAAGACAAAGAGAGAGTTCTTGATCGGATAAAGGAGCTGGAAACGGAATTAGACACTCTACATTACCGAAGAAGGGAAATAGAAGAACAAAATATTCGAATGAGATCCGAAAATCAATGGCTAAACACTAAGAATTCTGAATTGGAGATGGCATTGACGAGTAAAGAAACGGAAGCTTCTTCTCAGACGATCGCATTGATGGAGCAAGTCAAGAATCTAAAACATAAAGTGGATGGATCGCAGGCTGAAAAAACCAAATTAGAGCAAGAAATGGAGCGATATAAACAAGAATTTTCTCACAAATTCTCTGAAATGGAGGCAGAAAACAACAGATTGAAAAGCAAAATTGTCGATCAGGAAAGAATCCTAAAAGAAAAGGACGAAACAATAATCACATTTAACGAGAAATACAAGCAAGCAAGAAATTGCTTACCCGACGTCGCTTCGAGTCTGGTAAGCACAGAGAGAAAAATGGAAGAGTTAGCAGAAGAGCTCCGAAGCGGCCTAGAAGATAAAATCCGTATACTATCTCAGAGAATTCTCGTAGCAGAGCAACTACACAATGAAAGCAGAGAAAGCTTCAGAACAAGAAACAAAAGACACGAACAAGAGAAGAGACAGTTTGAACAAAAAATAGTAAATCACGAAGCAGAACTGATGAAACTGGGCAACATGAACGAATTCGGAATGGACAGAATGGCAAGAAAATTCGAAGAAGAGAGTGCGAAGCTTCTAAATCATATACTATGGATCACAAAGGAGCTTACATTCGCAAAATATTGGGTTAGAACGCGAAACAACGAGTTAAAACAACTGAAAACAAATTTAACTCGATTCGTTGCTCAAATGGAGGAAAAAGAAGAACAAGAGTTCTTGTTAAGAGAGAAACTATGGAATCTAGAGGCGAAAATAAGCAAAGAGGGAGGAGAGAAACTGAATCTGATCAGAACGTTAGGACAATTCGAGAAGAAGATGACGAAAATGGAGAATATACTGAAGGAGAAAGATGAAGAAGTGTTCCGACTTGCCGAAGAGAAGAGAGAAGTAATTCGACAACTATGCGTTGTGATTGATCACCATCGAAGCCGCTACGATCAGCTCAAAGACGTCATGCTCGAAAAGGTCAGAAACAATAGAATGATTTGA MMKHRMRKGLTDSNVINLKSDEITEQQKMTKAEMEQKMMRILKLMKNKDQGKSRGMPKDSKKETEVVGLVEDLYKSYQSIYEQYGHLRDEAERIFNSKSEDEEDKEDVSSSSSSSNSDSDLEYFSSEEVNTNNVHNLQDERSNNFHAQIQADELEKQIVQKNEALAKVDFLHRELDSVRSQKRELENRKNKEISENMALIVNLKQEISKKIGLEQKILEDKERVLDRIKELETELDTLHYRRREIEEQNIRMRSENQWLNTKNSELEMALTSKETEASSQTIALMEQVKNLKHKVDGSQAEKTKLEQEMERYKQEFSHKFSEMEAENNRLKSKIVDQERILKEKDETIITFNEKYKQARNCLPDVASSLVSTERKMEELAEELRSGLEDKIRILSQRILVAEQLHNESRESFRTRNKRHEQEKRQFEQKIVNHEAELMKLGNMNEFGMDRMARKFEEESAKLLNHILWITKELTFAKYWVRTRNNELKQLKTNLTRFVAQMEEKEEQEFLLREKLWNLEAKISKEGGEKLNLIRTLGQFEKKMTKMENILKEKDEEVFRLAEEKREVIRQLCVVIDHHRSRYDQLKDVMLEKVRNNRMI
BLAST of CsaV3_4G006410 vs. NCBI nr
Match: XP_004149765.2 (PREDICTED: golgin subfamily A member 6-like protein 22 [Cucumis sativus]) HSP 1 Score: 1052.7 bits (2721), Expect = 4.6e-304 Identity = 599/599 (100.00%), Postives = 599/599 (100.00%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. NCBI nr
Match: KGN53388.1 (hypothetical protein Csa_4G051400 [Cucumis sativus]) HSP 1 Score: 980.7 bits (2534), Expect = 2.2e-282 Identity = 560/560 (100.00%), Postives = 560/560 (100.00%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. NCBI nr
Match: XP_016901129.1 (PREDICTED: golgin subfamily A member 6-like protein 22 [Cucumis melo]) HSP 1 Score: 934.9 bits (2415), Expect = 1.4e-268 Identity = 535/567 (94.36%), Postives = 553/567 (97.53%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. NCBI nr
Match: XP_022931305.1 (COP1-interactive protein 1-like [Cucurbita moschata]) HSP 1 Score: 809.7 bits (2090), Expect = 6.7e-231 Identity = 479/601 (79.70%), Postives = 537/601 (89.35%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. NCBI nr
Match: XP_022985128.1 (COP1-interactive protein 1-like [Cucurbita maxima]) HSP 1 Score: 802.0 bits (2070), Expect = 1.4e-228 Identity = 476/601 (79.20%), Postives = 532/601 (88.52%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. TAIR10
Match: AT1G64320.1 (myosin heavy chain-related) HSP 1 Score: 113.2 bits (282), Expect = 5.5e-25 Identity = 82/222 (36.94%), Postives = 128/222 (57.66%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. TAIR10
Match: AT5G41780.1 (myosin heavy chain-related) HSP 1 Score: 94.0 bits (232), Expect = 3.4e-19 Identity = 152/594 (25.59%), Postives = 254/594 (42.76%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. TAIR10
Match: AT5G41790.1 (COP1-interactive protein 1) HSP 1 Score: 43.5 bits (101), Expect = 5.3e-04 Identity = 43/152 (28.29%), Postives = 63/152 (41.45%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. TAIR10
Match: AT1G64330.1 (myosin heavy chain-related) HSP 1 Score: 42.7 bits (99), Expect = 9.1e-04 Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 0
HSP 2 Score: 41.2 bits (95), Expect = 2.6e-03 Identity = 25/74 (33.78%), Postives = 41/74 (55.41%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. TrEMBL
Match: tr|A0A0A0KV05|A0A0A0KV05_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051400 PE=4 SV=1) HSP 1 Score: 980.7 bits (2534), Expect = 1.5e-282 Identity = 560/560 (100.00%), Postives = 560/560 (100.00%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. TrEMBL
Match: tr|A0A1S4DYS7|A0A1S4DYS7_CUCME (golgin subfamily A member 6-like protein 22 OS=Cucumis melo OX=3656 GN=LOC103493264 PE=4 SV=1) HSP 1 Score: 934.9 bits (2415), Expect = 9.2e-269 Identity = 535/567 (94.36%), Postives = 553/567 (97.53%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. TrEMBL
Match: tr|W9RY84|W9RY84_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012069 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65 Identity = 211/611 (34.53%), Postives = 330/611 (54.01%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. TrEMBL
Match: tr|A0A2N9EI54|A0A2N9EI54_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2307 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 2.8e-60 Identity = 146/326 (44.79%), Postives = 210/326 (64.42%), Query Frame = 0
BLAST of CsaV3_4G006410 vs. TrEMBL
Match: tr|A0A2P6P6D3|A0A2P6P6D3_ROSCH (Putative transcription factor bZIP family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0195441 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 4.8e-60 Identity = 154/397 (38.79%), Postives = 246/397 (61.96%), Query Frame = 0
HSP 2 Score: 79.7 bits (195), Expect = 2.4e-11 Identity = 99/365 (27.12%), Postives = 168/365 (46.03%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |