CsaV3_4G006180 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGCTGTCATTATTGTTTTTTTAAGAATAAGAGTACTTCTAGAAATGTTTTTTTTCTCATATATAAATGAGGGAGAAAAAGAGAGAGAAAAGAGTTGTTTTAGTAAAGTTTTGAATAATACTTCTTCTTCCTTCTTTCTCCCTCCCTCTCTCTCTCTCTCTTTGTGTGTCACAGTGTTTTGTAGTTCTGACGCGAGGACTGGGCTCTCCACATGACTACTCTGCAAACCACGTATTGAAGAAGAGAAGATGGACAAAATAAACCCAAAAGATCTTCTCTTTCTTCTTCTTCTCCTTCTCTCTCTTCTTTGGTAAAAATTAAAAAAAAAAAGGGTCTTTGTTAAGTCTGTCACTCACTCCCCATTTTCAGTTCTGCAAAGTCCAACAGCCATTACCATCTCGTCGTCCTTCTCCTGAAACCTACCCTGACTCAGCTCTTTCTCAAAGTGTCCTCTTTTTTTCTCCTATCTTTACCTTCTCTTTTTTCTTCTTCTTTTTCTAAAAAAAAATCTCTTCCCCATTCCTCTATTCTGGCTCTCCCAACCATGGAAAGCTTCAGCTTGCTCAAATATTGGAGAGGTGGCGGCGGCACCGGTGCTACTGCCGCCGCTGATTTTGCTTTTAATAGCAACTCTTCTACTTCTGCCACAGCTACTGTTGTCACTGCTGTTCCGCGGAAAGAGGTGGATACGGATGAGGAGGAGAATGATAGTGATGATGGACCGTTTTTTGATTTGGAGTTTGCTGTTCCTGACGAGGACGAGGGTCGAAAACAGGGAAGAAACTGTATTGATGGAAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAAATGATGATGATGATGATGATGAAGAAGATGAAGATGGAGATGGGGATGAGAGAGAGTTTAACTTCACGCTCTCATCTGGCTCTAGCAATGAACATTCCGATGCCAATCTCACGTTTTCTCCTTCTGATGACTTGTTTTTCAAAGGAAAGCTTGTTCCAGTTGAAGCTTCCTCCAACGGCGGTTCTGAACCAAACGTCAGGCCGCAACTTCGTGTCACATTGTTGAAATCAGCAGCTAAGTTTAGGGTCTTCATGTCGGGGTTGAAGAAATCGAAATCCAACGTGGAAAAGAAAACAGAGACGGATGGATCTGTTGAAGAGACGGCTAAAAGTGAGACAAAAGAAGAGACGACGGAAAACCCATTGGTGATAAACGAAAACCAACCGGAAAAAGATCAGAATCAGGCTAAAAATAAGTTTTTTGCTGTGAAATTTAAGGTCGAGGAAGTTCCGATCATGTCTCTGTTTACTAGAGACAACAGTTCAAGAGGGTCCGGAGTAACAACCAACAACAAACCCCAGAAACAAACCTCCGATGAATCAACTCCGGAGGAAAATCGTTTCTCAAAAGACGTATTAATGCAAAAGTACTTGAAGATGGTGAAGCCTCTGTACATTCGGGTTTCAAGAAGATACGGCGAGAAGTTCAAACTATCCGGACAGCTTATTTTGGGTGCAGCTGGAGCCAAGTCAAGTGCGCCGCCGTCTATAGCGGCGCCACCCACCTCCCCGTCGGCGGAGAAGTCCCTGGTAGAGACAGAAGCTGTCCAAGTGAAACCACCAACGACTACGACCAACAACAGCAAAGGCAGGAACATGCCAGCCAAGCTAAGAGTGGTTTGTAAGCATTTGGGAAAAAGTCGGTCAGCTTCCTCCGCCGTAGCGGCGGCGCCACCGGGGGTAGCACCGTCGAGAAGAGACGATTCGCTTCTGCAGCAACAAGACGGAATCCAAAGCGCCATTCTCCATTGCAAGAGATCCTTCAACGCTTCTCGAGGTAAAAAAAAGAAAAACAACTGTTCACTCCTCTGTTACAAGTATTAAAAGTTAAACCAATTTTGTTCAACTTCATTAATTGATCATCTCTTTCAATGACAGGTTCAGAGTCTTCCTTATTATCAAGGTCAGTAAGCGACACTCTGCGTGAGAAACCTTCAGATTTAACAGAAAAAGCCATTGGTTGAAGGTAAAGAACACAATGTTCAGATCGAACCAAGAGAAAAATTTCAAGCCAAACAGAAACGGCGGGAAAATTTTTGGTCAATATCCTGAATATTTCTCTCGTTTTTACATATATATATATATATATATAGATCTTTGTGTAGTATATGTAAATGTGCAGGTGTTAGGTTAGAGGATCGAATTTCTGGGGTGGGTTTGGCTTCTAAGTAAAAAGGTTCAATCTTTCCAATGAAGGGAAAAAGAAGAAACATTGGTTGTATGTGTTTTTTTTTGTAATCAGTAAAAAGTATTTAGGAACTGATACATACAAACCAAGAACAGTTGCCCCCAAGTATGTGATTTTTCCTTTGCCTAACCCCAAAATGAAACTTAGAAACCACTGAACTCAAGTGGGTGCTACGAAATTATGTTACTTTTTTTGGCTTTTTAGATTGGTAAAGGATGTGGGACTCTTAACTAGGCTGTTCTCTGAGGCAAAAATGGTGTCTTTAGTGGTCAGAGAAGTGGGGAAAAGTGAGTTTTACTTGAACAGTGAAAATGAGTTTCTTTTTTTTTTCTTTATTTTTTTTAAGGTCTAGAGAAAGAAGAGAGATGCGTTATCCTTTTTCCTCTCTCCATCTCTTGTTTTATTCAATGGGTTATGGTCTAAAAGTAAGAACAAAGGGAAGCATGTGGGGGTTTATTGAATACCTTTATGGAGGTTAATGATGATGGGTCTCCATATTCATGAATCAGTCGAAATCTTCAGCTAAAGTTTTTAAAAATATTAGAGTGTTTATAGATTCAATTCTGTCTTTTCAAGACCCAAGGTTTTGATTTGGTCCCATGAAAATCGCTGCCTCTTGGGATGCCTCTCTCGTTCCTTCCATACCAAATTGTTGTCATGTTGTCCATATTATGGTTCCTTTTTTTCTTTCTTTTTAATTCATCATCTTTTGAAGTACATATAATCGTATTATTGTCTTAATGGATTGTGGAGAATTTTTCCAACAAAGGGTTTGGACCTTTCTGACTTAGTTTTTTTTTCTCCTATTTTTTAAAATACTAATTTATCCATCTTCCCACCCTCTAAGCTCTATGTCCCAAAAAAATTCATGCTTTGGTTCATTTTTATTACTTTACTCTTGAATTGTTCACTTTAGTCCTAAACCTTACAAAAAACTGTCCATCTTGATCTCAATTTTAAAGAGATTTATTTGCAAAAGGATGACTTTTTAAAAGTGGAGAGACCAAAACAAACATTTTGTAAGTACAGAAACTAAACTTAACATGTATGAACCCAAATGAACGTTGTTAGTTTAAAAGTATATAGATGCAAAATAAACTAAAGTAAATGTTCATAAAATTGGATTTTAAATTATATGGGAAAGTTAAAATCTTCATCATTTATTAGAAGGAGAAGAGTTCAAGTGGGTATTTTTCAGTTGACTGAAGGAAGGAAGGCACAAACTTCCAAAATATCATGAGTAAAGATGATTCAGATACTCCTTTTAATCGTAGTAATGGTCTCCTTTTTCAAACAGTTGGCTCAGAATATGGCTTTTCTACCTCTCTTTCCTTGTCTGTGTTTCCACTCCAGTGAAAAATAATTCCCAACTTGATGAGGTGTAGAGGGCATAGGCATCATGTGACACATTTATTTTTGGACATCTTTGTAGTATATAGACAAGGGTATTTTTCACATCTAAATTTGCCTGTTTTCTATTTTCCATTACTATCCTTTTTTGTTTTGTTTTGCTTCGTCAGAGAGGGAGACAAAGAGATTAGGCAGATGATTAATTGTAATAGTAATGTCTCCTACATGTGCAGCTACAGATGTTGACCACCACTTCTTCCCTTCTACATATAAATTAATTCATCATATATTAGAAATGGAATTGCGGGTTTCTTTCTTTCGACTAGGATTTCTTTGAGTCATGTGACAATTTGGAACTTTTATTTTTGTTTTAGATTTGTATAATTTTATTTGGGTTATTGTTACATGTGTGTGTCTAGATCTAGGGGAAAGGAAACCTCTTGTCTCTATCCTTTTTGTCTTGTGATTCTCCTAGAATTTTAAATGAGGATGAGAGAAACAACTTTAGTAT ATGGAAAGCTTCAGCTTGCTCAAATATTGGAGAGGTGGCGGCGGCACCGGTGCTACTGCCGCCGCTGATTTTGCTTTTAATAGCAACTCTTCTACTTCTGCCACAGCTACTGTTGTCACTGCTGTTCCGCGGAAAGAGGTGGATACGGATGAGGAGGAGAATGATAGTGATGATGGACCGTTTTTTGATTTGGAGTTTGCTGTTCCTGACGAGGACGAGGGTCGAAAACAGGGAAGAAACTGTATTGATGGAAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAAATGATGATGATGATGATGATGAAGAAGATGAAGATGGAGATGGGGATGAGAGAGAGTTTAACTTCACGCTCTCATCTGGCTCTAGCAATGAACATTCCGATGCCAATCTCACGTTTTCTCCTTCTGATGACTTGTTTTTCAAAGGAAAGCTTGTTCCAGTTGAAGCTTCCTCCAACGGCGGTTCTGAACCAAACGTCAGGCCGCAACTTCGTGTCACATTGTTGAAATCAGCAGCTAAGTTTAGGGTCTTCATGTCGGGGTTGAAGAAATCGAAATCCAACGTGGAAAAGAAAACAGAGACGGATGGATCTGTTGAAGAGACGGCTAAAAGTGAGACAAAAGAAGAGACGACGGAAAACCCATTGGTGATAAACGAAAACCAACCGGAAAAAGATCAGAATCAGGCTAAAAATAAGTTTTTTGCTGTGAAATTTAAGGTCGAGGAAGTTCCGATCATGTCTCTGTTTACTAGAGACAACAGTTCAAGAGGGTCCGGAGTAACAACCAACAACAAACCCCAGAAACAAACCTCCGATGAATCAACTCCGGAGGAAAATCGTTTCTCAAAAGACGTATTAATGCAAAAGTACTTGAAGATGGTGAAGCCTCTGTACATTCGGGTTTCAAGAAGATACGGCGAGAAGTTCAAACTATCCGGACAGCTTATTTTGGGTGCAGCTGGAGCCAAGTCAAGTGCGCCGCCGTCTATAGCGGCGCCACCCACCTCCCCGTCGGCGGAGAAGTCCCTGGTAGAGACAGAAGCTGTCCAAGTGAAACCACCAACGACTACGACCAACAACAGCAAAGGCAGGAACATGCCAGCCAAGCTAAGAGTGGTTTGTAAGCATTTGGGAAAAAGTCGGTCAGCTTCCTCCGCCGTAGCGGCGGCGCCACCGGGGGTAGCACCGTCGAGAAGAGACGATTCGCTTCTGCAGCAACAAGACGGAATCCAAAGCGCCATTCTCCATTGCAAGAGATCCTTCAACGCTTCTCGAGGTTCAGAGTCTTCCTTATTATCAAGGTCAGTAAGCGACACTCTGCGTGAGAAACCTTCAGATTTAACAGAAAAAGCCATTGGTTGA ATGGAAAGCTTCAGCTTGCTCAAATATTGGAGAGGTGGCGGCGGCACCGGTGCTACTGCCGCCGCTGATTTTGCTTTTAATAGCAACTCTTCTACTTCTGCCACAGCTACTGTTGTCACTGCTGTTCCGCGGAAAGAGGTGGATACGGATGAGGAGGAGAATGATAGTGATGATGGACCGTTTTTTGATTTGGAGTTTGCTGTTCCTGACGAGGACGAGGGTCGAAAACAGGGAAGAAACTGTATTGATGGAAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAAATGATGATGATGATGATGATGAAGAAGATGAAGATGGAGATGGGGATGAGAGAGAGTTTAACTTCACGCTCTCATCTGGCTCTAGCAATGAACATTCCGATGCCAATCTCACGTTTTCTCCTTCTGATGACTTGTTTTTCAAAGGAAAGCTTGTTCCAGTTGAAGCTTCCTCCAACGGCGGTTCTGAACCAAACGTCAGGCCGCAACTTCGTGTCACATTGTTGAAATCAGCAGCTAAGTTTAGGGTCTTCATGTCGGGGTTGAAGAAATCGAAATCCAACGTGGAAAAGAAAACAGAGACGGATGGATCTGTTGAAGAGACGGCTAAAAGTGAGACAAAAGAAGAGACGACGGAAAACCCATTGGTGATAAACGAAAACCAACCGGAAAAAGATCAGAATCAGGCTAAAAATAAGTTTTTTGCTGTGAAATTTAAGGTCGAGGAAGTTCCGATCATGTCTCTGTTTACTAGAGACAACAGTTCAAGAGGGTCCGGAGTAACAACCAACAACAAACCCCAGAAACAAACCTCCGATGAATCAACTCCGGAGGAAAATCGTTTCTCAAAAGACGTATTAATGCAAAAGTACTTGAAGATGGTGAAGCCTCTGTACATTCGGGTTTCAAGAAGATACGGCGAGAAGTTCAAACTATCCGGACAGCTTATTTTGGGTGCAGCTGGAGCCAAGTCAAGTGCGCCGCCGTCTATAGCGGCGCCACCCACCTCCCCGTCGGCGGAGAAGTCCCTGGTAGAGACAGAAGCTGTCCAAGTGAAACCACCAACGACTACGACCAACAACAGCAAAGGCAGGAACATGCCAGCCAAGCTAAGAGTGGTTTGTAAGCATTTGGGAAAAAGTCGGTCAGCTTCCTCCGCCGTAGCGGCGGCGCCACCGGGGGTAGCACCGTCGAGAAGAGACGATTCGCTTCTGCAGCAACAAGACGGAATCCAAAGCGCCATTCTCCATTGCAAGAGATCCTTCAACGCTTCTCGAGGTTCAGAGTCTTCCTTATTATCAAGGTCAGTAAGCGACACTCTGCGTGAGAAACCTTCAGATTTAACAGAAAAAGCCATTGGTTGA MESFSLLKYWRGGGGTGATAAADFAFNSNSSTSATATVVTAVPRKEVDTDEEENDSDDGPFFDLEFAVPDEDEGRKQGRNCIDGSEEEEEEEEENDDDDDDEEDEDGDGDEREFNFTLSSGSSNEHSDANLTFSPSDDLFFKGKLVPVEASSNGGSEPNVRPQLRVTLLKSAAKFRVFMSGLKKSKSNVEKKTETDGSVEETAKSETKEETTENPLVINENQPEKDQNQAKNKFFAVKFKVEEVPIMSLFTRDNSSRGSGVTTNNKPQKQTSDESTPEENRFSKDVLMQKYLKMVKPLYIRVSRRYGEKFKLSGQLILGAAGAKSSAPPSIAAPPTSPSAEKSLVETEAVQVKPPTTTTNNSKGRNMPAKLRVVCKHLGKSRSASSAVAAAPPGVAPSRRDDSLLQQQDGIQSAILHCKRSFNASRGSESSLLSRSVSDTLREKPSDLTEKAIG
BLAST of CsaV3_4G006180 vs. NCBI nr
Match: XP_004146574.2 (PREDICTED: probable membrane-associated kinase regulator 2 [Cucumis sativus] >KGN53363.1 hypothetical protein Csa_4G050180 [Cucumis sativus]) HSP 1 Score: 543.5 bits (1399), Expect = 6.8e-151 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. NCBI nr
Match: XP_008451996.1 (PREDICTED: probable membrane-associated kinase regulator 2 [Cucumis melo]) HSP 1 Score: 470.7 bits (1210), Expect = 5.6e-129 Identity = 277/326 (84.97%), Postives = 278/326 (85.28%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. NCBI nr
Match: XP_022985394.1 (probable membrane-associated kinase regulator 2 [Cucurbita maxima]) HSP 1 Score: 371.3 bits (952), Expect = 4.6e-99 Identity = 232/336 (69.05%), Postives = 240/336 (71.43%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. NCBI nr
Match: XP_023529752.1 (probable membrane-associated kinase regulator 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 361.3 bits (926), Expect = 4.8e-96 Identity = 225/333 (67.57%), Postives = 236/333 (70.87%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. NCBI nr
Match: XP_022942302.1 (probable membrane-associated kinase regulator 2 [Cucurbita moschata]) HSP 1 Score: 360.9 bits (925), Expect = 6.3e-96 Identity = 226/337 (67.06%), Postives = 236/337 (70.03%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. TAIR10
Match: AT1G64080.1 (unknown protein) HSP 1 Score: 104.8 bits (260), Expect = 1.5e-22 Identity = 125/319 (39.18%), Postives = 155/319 (48.59%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. TAIR10
Match: AT5G52870.1 (unknown protein) HSP 1 Score: 63.9 bits (154), Expect = 2.9e-10 Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. Swiss-Prot
Match: sp|Q9SH58|MAKR2_ARATH (Probable membrane-associated kinase regulator 2 OS=Arabidopsis thaliana OX=3702 GN=MAKR2 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.7e-21 Identity = 125/319 (39.18%), Postives = 155/319 (48.59%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. Swiss-Prot
Match: sp|Q9FLX4|MAKR5_ARATH (Probable membrane-associated kinase regulator 5 OS=Arabidopsis thaliana OX=3702 GN=MAKR5 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 5.2e-09 Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. TrEMBL
Match: tr|A0A0A0KUX5|A0A0A0KUX5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G050180 PE=4 SV=1) HSP 1 Score: 543.5 bits (1399), Expect = 4.5e-151 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. TrEMBL
Match: tr|A0A1S3BTL4|A0A1S3BTL4_CUCME (probable membrane-associated kinase regulator 2 OS=Cucumis melo OX=3656 GN=LOC103493135 PE=4 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 3.7e-129 Identity = 277/326 (84.97%), Postives = 278/326 (85.28%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. TrEMBL
Match: tr|F6HUP0|F6HUP0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g00550 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 8.7e-62 Identity = 173/332 (52.11%), Postives = 192/332 (57.83%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. TrEMBL
Match: tr|A0A1Q3CXW8|A0A1Q3CXW8_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28529 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56 Identity = 167/323 (51.70%), Postives = 189/323 (58.51%), Query Frame = 0
BLAST of CsaV3_4G006180 vs. TrEMBL
Match: tr|M5WER9|M5WER9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G110000 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 4.2e-56 Identity = 183/338 (54.14%), Postives = 205/338 (60.65%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |