CsaV3_4G005870 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G005870
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionAT-rich interactive domain-containing protein 2
Locationchr4 : 3862832 .. 3868307 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTTTTTCCCTACTTGGTTTTCGTTTTGTTGAGCTGCCCCCCACTTCCACCATTTTTAAACTCATCAAAGTTGCATCCTTCTCCATTTGACCGTCCCAATTTACTCACCCTTTCTCTCTTGATTCCATCTTCCATCTTCAACCTTACAATCTGCGTCTTCATAACATGTTGGAGTCCCAGATTCCCAAAATGAGGTAGACCCTTTTGAGTTTTCTTTGCAAAGGGTTTTATCTATTATTTGCCCTAATCTTGTTGGTTTATTTGTTTCATATGTATCTTTAACGAGAAAAGAAAACAACAATACGAACCCCTGTACTGCGATTTTTTTTTCTTTTTTATTTTAAAGTGAGGGTTTGAGTTCATGGGGAGATGGCCTATTTCATCCAATGATTCCATTCTAGATTGCAACAAAGATGTTGATCCTAATCCCAGTTATGGCTATTGCATTGCCCCGGATTGTTTGGTAGAAGGAAGTTGTGCTAATGTTGATCATGATGATTGCAAAGCCACGATTAGATGCTATTTTGAAAAAGTTCTTTGGGTTTTTCTAAAGGAAACGTGTCGTAGAGGATTTATTAGACCAGTGCCGGCGTTACTAGGTGAAGGGGAATCTTTGGATTTGTTTGAACTGTTCATGGTTGTTAGAGATAAAGGAGGTTATCAAGTGGTTTCAGAAAAGGAACTATGGTCTTCAGTTGTTGTGGAATTAGGTTTGGATCTTGGGCTTTCGGCTTCAGTGAAATTGATTTATTTCAAGTACTTAAGTGACCTTGAGAAATGGCTTATGGTGAGACGTGGAGGCACAAAATTGGAAAATGGGAACTCCGATTGTTATTACTACAGGAAAAACTTTCCATGTTTGGCAGAACTGGAGGCAAAGATTAAGGATATATTATATGGTGTGCTGAGACAAAAGAGCATATATGATGAACGATCTGGATTCAAATCCAACAAACCAAATGGGAACGTTAATGTTGCTGAAACTGCAGCAGAGAAGGAAATAAAATCCCCTAAAATAGAGAAGAAAGAACATGATCTTCACGAGGATGTCACACCAATTCAACAAAATTGTACTGAGACACCTCGGGACAATGGCAAAACCAATCAAATCCATGTTATTGGAGATTGTAGAAGTTCGGATGCTGTTAATGTTGAAACTGAAACAGACTCTCATGGGAGCTCTCGAGAATCTTTATTTCGAATGCTGAAGTGGGTGAGAAAGACTGCAAAGCATCCTGCAAATCCATCAAATGGTACAGTACCGGGGTCATCCAAGTGGAAAGCGTATGCTAGCGAGGATGCATTATGGCTTCAAGTTATCAAGGCAAAGGATGCTCTTTTAAATAGGAAGGATGTTGACAAAACCGCTGAGAAACGTCTGTTAATACAGGTAGATTTCACTCACTTATTCTGCTTGTCAGCCAGCACTCTCTCTCCCTCCCTCTTCTATCTTCCTCTTATTGCTTGACCGTTAGACATATACACATGGATTCTTGCTTTGGACTGCTATTATGTACAAAAACTGACCTCTGCAGGCAATACGATCTTTGGCTTTCTTTTTCAGGATAAATGTCTCCTGATTATAATCAACGCCCTTTTCATTCTTATGTAGAATGGAAAAAGTTACCTCCTGCTATTAAAACCTCAGATCTCTATCATCATAAGCAAGCAGCATACAACTTCTAAGTCACCCTATCTTGTGTCCTACGCGATAACACGATGGACACAGTGAGGCAAACATAAATCTTTGTCATTGACGATGGGTCTACTAGCATAGTTTTTTTTTTTTTTTTTTATCACGGATACTTCAATGACAATAGTGCAAGGTTGTTCCTGGTTTATGGGTTCTGATGTTCTGTTTCGCTTCACCTCTTAACTCACTATTAGGAGTTCACATCTCTCAGTTTTCAAGCAAGTGTGCCTGTAAAGAAAGAGTTCTCTCCACCGCCAAAAGAATCTGTATATATTTATTATATTTCTTTTGGGGGGTCTTAGTGTTTTCCAAATGGAAGTTGTTATTCATAAGTTATAAAGTCGAGTGTCAAGTTGTGCATGTTGCCTATGCTTTCGGTGGGGGGAGCTCCAAGGCTGCTCATAGGTTTTCATACTTATAGGAAGGATGAGTTCTTCAAAGAATAAGTTTAGTGTAAATGTATCTGGAATTCTAGGACTAGGAAATTGAAAGTAGATTTTACATAGATTCGCAGAGATCAGAAAGATTGAAAGGGCGAGAGTTTAATCTAAGAATTCTGATGATTGAATATGACTTAAGTGATAGTTGGAGGAGCTGCGTATTAGTGAGAGCTCTTACTTGGAGAAAAATTCCAAAGTCTAGGGGTTTAGGAGGGCGAGGTTAATACTAATAGCACCTAGGAGGAATAGCAACCTAATGATTGTGAATAAGGCTGCTTTCACTAAGGAGGAGGATATGTAAAGTGGGATTATTGGTATATTTATAATAACAAGGGCTGTCTCAATCTTCTGATTTCTTTTTCATGGACCAAGATTTTTGTTGTGGGGGGGAGGGGATACTCTTATATGTATAGCAACTACATTTACCTTCTGCCTGTAGGATCCTAGGATTAATGGCTGTGATTGTGATTAGTAGGATGGGGATCTTTCTCACAGCCTCTGATATTTGTCTTCCTTCATGCAACTTTGTTTCCAGATATCAAGGGTTGTTAGACAGAGGACTTAGCTCTCCTTTTCCTTCTTTTTCCTGCTGATGCTCTTGATCATCTATAGAAAGGGTTGAGAGGACTTGTCTATTATTTTTAGATGAGTGGAGGCTTGATTTCAAACTCATCTGCCATACATTTGATTGTCCATGTTCTTATAGGAAGAGATTCACCAAGTGAAGAAAGCCTTTCTGGGAGGAGGAGTCTTGCCCTTACCCAATTGATGTTTTCTTAATGCCCTTTTTTCACACACACACACACACATTTAGAGCCTCTCTTGCTTCTCATTGTGGAGGACAAATTGTGTTATGAGGAATCTATTGTAGTAATGGATGAAGATTGTTTTGATTCTCACCTGGTTTGTTGGATTTGGGTGGTGTGCCTTTTTGCTTTAGTTGTTTTAGGTATCAGAAACTTGGATGCTAAGAACATTGTTTTGCTGGATAAGTGGGTTTTAGAGATTCTAAACGGAGGTTGCTTTGCGTTTGGTGTAAAATTGTTACGGGCAAGAGCGGTCTTTAGGTTAATGGCTGATCCTTCATTCTTGTTAGGTAGTACACACCATAGTCCTTGAAAGTTCATTTTCTTGGGCTTTTGTTCTCGTTGTCCATGGACAATGGAGAGTATGTCCTTTAGGAGTAGAGGTGATCTAGTAGGTAGGAACCCTCAATTTATTGGAACAAATCATTTTAGTGATATAATAAAATATATGTACATATAGGGACAAAAGGAGAGAAAAGCCTCAACCCACCACTGAGGAGGTCACAAGAAAGTTCCATCCTTAGGCAAACTAAAAAATGTTGAATAAAAATCAATGTAGTGAAGTTTCCACACGTGTACACATGTATGATACTAGGTAGAAATATCATTGTTTTGCATCGGGCTTTTCATGTATCTTTTGTTTTTCTTTTGAAAATTTGGGGAACATTGTGAGCTTGTTTTTACATATATATGACAGAAATGTTCTAACGCTTGGGCACGACAAATAAACTTGGAGAAATATGTTCAACTTGTTTGTTAGACTAGTTCTTTTTTGCAGCCATGTCTCTATTAATTTGGTTTTCGTACATTCTTTGTTTGTTATGACATATATAAGTTTATGAACCATGTTCATACAATTTTAATTATATCTCTAAATCTTTTTATCCATATTACTTCGTTCCAAAATTGCCAAGGTGGCTGTTGTAGTGTTGTATTTATGTTGAGTGTAGGTGGTATATATGCTTGCTCCTTAGGATGGCAAGCATAACTTTTAGTTACGAAGAAAGAAGCTTATCTATCAATGGTTTCTTTGTTTAAACAGAATTAAATGAACTACTAAGTTTGAGGAAAAAAGATTTTGGTTTAAACTTGCAGAAGAAAGTAAGGATGCATCCATGCATTTATGAGGATAATATTGATGATAACCATCACCTCTCTACAGAAAGGATCTGTTGCAGCAGAAGATCTAATGCTTTGTCCAAATCTGAATCGGTCGCATGTAATAATTCATGTCCACCCGTCCAAAGTAATCAGATTGGCAGTCTAACAACAGAAATTGGGAAGGGACTCAAGAATCAAGCACTCTTGAATGGTGATTTAGCATCTGAAATGGAAGACAATCAGGCAAATGAAGATTCTGTCGAGAAGCCTGTTCCTGTAGGTGCTTCATTTCAAGCAGTATTACCTGAATGGACTGGTAATATTTCCGATAGCGACTCTAAATGGTTAGGGACACGGTCGTGGCCTTCTCAACACGAAAATAACAAGTCTGTAAGCGATAGAAATCCCATCAGCAGAGGGAGACTGGATCCTTGTAGTTGCCAATTTCCAGGTTCGGTTGAATGTTATAGATTTCATATTGCAGAAGCAAGGATGAGATTAAAGCTCGAACTTGGTTTGACATTCTATGATTGGAGATTTCATCAAATGGGGGAGGAAATATCTCTGCAGTGGACTGCTGAAGAGGAAAATAGATTTAAAGAGTTGGCAATATCCAGTTTTAATAATCAAAATCAGTGCTTTTGGAACCATTCCTTGAAGTGGTTCCCAATGAAATCAAGGAAAAACTTGATAAGCTACTACTTCAACGTGTTTCTTTTACGGCAGAGAAGCTATCAGAATCGTGTTACTCCAAATGACATTGATAGCGATGGTGAAGATGTAGAGTTTGGTTGCATCAGTGGTGATTTTGGGGCTAAGGCAATGGAAGTTTTAGGCTCAAAATTTGTAGAATGTTCTGAAAATAAACAGTTCATAGGTATTTGAAGGCAACCGGCAGTTTGAAGGAAAGGAGAAAAGAGAAGAATAAGTGTTAAACTCGAACCAATGCCTGCATGAGCGTAATTTTTCTCAACATTCTGCTGTAGAATGTGAAGTCATCCAAAAAAGAGGGGAAATAAACCCAATTTTGAAGAGATGTTTTTAGCTACACAAACACCATTTTTGTTTTGGGGGGGGGGGGGGGGGGGGGATCTGTATTTTATCCGCTGATGAGAAGAAATATGATAACCAGAGAGAGTGATCGGTAGACTTGTTTGTTTTGAATTTGTGTATGTGTTGGGAACTCAATCTCTTTGTTTTGCATTTGGAGACTGTTGTAATCATTTTGAAGAGGTTCCAGGGGAATTTTACCGATGATTAAAAGGTCGAGGTCGACTTGAGCACGAGAAAGACTCAACAGATTGTCTTCAACCAAAAAAGTTTATGTTTTGAAACTCAGACACACACATGTACTAAAAATAAAGCTAACATAAAACTAATTATTGATTATTAACGAACAAAAATTTATTTTTACTCTTTTCCTCCCTTCCCTCTC

mRNA sequence

ATGGGGAGATGGCCTATTTCATCCAATGATTCCATTCTAGATTGCAACAAAGATGTTGATCCTAATCCCAGTTATGGCTATTGCATTGCCCCGGATTGTTTGGTAGAAGGAAGTTGTGCTAATGTTGATCATGATGATTGCAAAGCCACGATTAGATGCTATTTTGAAAAAGTTCTTTGGGTTTTTCTAAAGGAAACGTGTCGTAGAGGATTTATTAGACCAGTGCCGGCGTTACTAGGTGAAGGGGAATCTTTGGATTTGTTTGAACTGTTCATGGTTGTTAGAGATAAAGGAGGTTATCAAGTGGTTTCAGAAAAGGAACTATGGTCTTCAGTTGTTGTGGAATTAGGTTTGGATCTTGGGCTTTCGGCTTCAGTGAAATTGATTTATTTCAAGTACTTAAGTGACCTTGAGAAATGGCTTATGGTGAGACGTGGAGGCACAAAATTGGAAAATGGGAACTCCGATTGTTATTACTACAGGAAAAACTTTCCATGTTTGGCAGAACTGGAGGCAAAGATTAAGGATATATTATATGGTGTGCTGAGACAAAAGAGCATATATGATGAACGATCTGGATTCAAATCCAACAAACCAAATGGGAACGTTAATGTTGCTGAAACTGCAGCAGAGAAGGAAATAAAATCCCCTAAAATAGAGAAGAAAGAACATGATCTTCACGAGGATGTCACACCAATTCAACAAAATTGTACTGAGACACCTCGGGACAATGGCAAAACCAATCAAATCCATGTTATTGGAGATTGTAGAAGTTCGGATGCTGTTAATGTTGAAACTGAAACAGACTCTCATGGGAGCTCTCGAGAATCTTTATTTCGAATGCTGAAGTGGGTGAGAAAGACTGCAAAGCATCCTGCAAATCCATCAAATGGTACAGTACCGGGGTCATCCAAGTGGAAAGCGTATGCTAGCGAGGATGCATTATGGCTTCAAGTTATCAAGGCAAAGGATGCTCTTTTAAATAGGAAGGATGTTGACAAAACCGCTGAGAAACGTCTGTTAATACAGAAGAAAGTAAGGATGCATCCATGCATTTATGAGGATAATATTGATGATAACCATCACCTCTCTACAGAAAGGATCTGTTGCAGCAGAAGATCTAATGCTTTGTCCAAATCTGAATCGGTCGCATGTAATAATTCATGTCCACCCGTCCAAAGTAATCAGATTGGCAGTCTAACAACAGAAATTGGGAAGGGACTCAAGAATCAAGCACTCTTGAATGGTGATTTAGCATCTGAAATGGAAGACAATCAGGCAAATGAAGATTCTGTCGAGAAGCCTGTTCCTGTAGGTGCTTCATTTCAAGCAGTATTACCTGAATGGACTGGTAATATTTCCGATAGCGACTCTAAATGGTTAGGGACACGGTCGTGGCCTTCTCAACACGAAAATAACAAGTCTGTAAGCGATAGAAATCCCATCAGCAGAGGGAGACTGGATCCTTGTAGTTGCCAATTTCCAGGTTCGGTTGAATGTTATAGATTTCATATTGCAGAAGCAAGGATGAGATTAAAGCTCGAACTTGGTTTGACATTCTATGATTGGAGATTTCATCAAATGGGGGAGGAAATATCTCTGCAGTGGACTGCTGAAGAGGAAAATAGATTTAAAGAGTTGGCAATATCCAGTTTTAATAATCAAAATCAGTGCTTTTGGAACCATTCCTTGAAGTGGTTCCCAATGAAATCAAGGAAAAACTTGATAAGCTACTACTTCAACGTGTTTCTTTTACGGCAGAGAAGCTATCAGAATCGTGTTACTCCAAATGACATTGATAGCGATGGTGAAGATGTAGAGTTTGGTTGCATCAGTGGTGATTTTGGGGCTAAGGCAATGGAAGTTTTAGGCTCAAAATTTGTAGAATGTTCTGAAAATAAACAGTTCATAGGTATTTGA

Coding sequence (CDS)

ATGGGGAGATGGCCTATTTCATCCAATGATTCCATTCTAGATTGCAACAAAGATGTTGATCCTAATCCCAGTTATGGCTATTGCATTGCCCCGGATTGTTTGGTAGAAGGAAGTTGTGCTAATGTTGATCATGATGATTGCAAAGCCACGATTAGATGCTATTTTGAAAAAGTTCTTTGGGTTTTTCTAAAGGAAACGTGTCGTAGAGGATTTATTAGACCAGTGCCGGCGTTACTAGGTGAAGGGGAATCTTTGGATTTGTTTGAACTGTTCATGGTTGTTAGAGATAAAGGAGGTTATCAAGTGGTTTCAGAAAAGGAACTATGGTCTTCAGTTGTTGTGGAATTAGGTTTGGATCTTGGGCTTTCGGCTTCAGTGAAATTGATTTATTTCAAGTACTTAAGTGACCTTGAGAAATGGCTTATGGTGAGACGTGGAGGCACAAAATTGGAAAATGGGAACTCCGATTGTTATTACTACAGGAAAAACTTTCCATGTTTGGCAGAACTGGAGGCAAAGATTAAGGATATATTATATGGTGTGCTGAGACAAAAGAGCATATATGATGAACGATCTGGATTCAAATCCAACAAACCAAATGGGAACGTTAATGTTGCTGAAACTGCAGCAGAGAAGGAAATAAAATCCCCTAAAATAGAGAAGAAAGAACATGATCTTCACGAGGATGTCACACCAATTCAACAAAATTGTACTGAGACACCTCGGGACAATGGCAAAACCAATCAAATCCATGTTATTGGAGATTGTAGAAGTTCGGATGCTGTTAATGTTGAAACTGAAACAGACTCTCATGGGAGCTCTCGAGAATCTTTATTTCGAATGCTGAAGTGGGTGAGAAAGACTGCAAAGCATCCTGCAAATCCATCAAATGGTACAGTACCGGGGTCATCCAAGTGGAAAGCGTATGCTAGCGAGGATGCATTATGGCTTCAAGTTATCAAGGCAAAGGATGCTCTTTTAAATAGGAAGGATGTTGACAAAACCGCTGAGAAACGTCTGTTAATACAGAAGAAAGTAAGGATGCATCCATGCATTTATGAGGATAATATTGATGATAACCATCACCTCTCTACAGAAAGGATCTGTTGCAGCAGAAGATCTAATGCTTTGTCCAAATCTGAATCGGTCGCATGTAATAATTCATGTCCACCCGTCCAAAGTAATCAGATTGGCAGTCTAACAACAGAAATTGGGAAGGGACTCAAGAATCAAGCACTCTTGAATGGTGATTTAGCATCTGAAATGGAAGACAATCAGGCAAATGAAGATTCTGTCGAGAAGCCTGTTCCTGTAGGTGCTTCATTTCAAGCAGTATTACCTGAATGGACTGGTAATATTTCCGATAGCGACTCTAAATGGTTAGGGACACGGTCGTGGCCTTCTCAACACGAAAATAACAAGTCTGTAAGCGATAGAAATCCCATCAGCAGAGGGAGACTGGATCCTTGTAGTTGCCAATTTCCAGGTTCGGTTGAATGTTATAGATTTCATATTGCAGAAGCAAGGATGAGATTAAAGCTCGAACTTGGTTTGACATTCTATGATTGGAGATTTCATCAAATGGGGGAGGAAATATCTCTGCAGTGGACTGCTGAAGAGGAAAATAGATTTAAAGAGTTGGCAATATCCAGTTTTAATAATCAAAATCAGTGCTTTTGGAACCATTCCTTGAAGTGGTTCCCAATGAAATCAAGGAAAAACTTGATAAGCTACTACTTCAACGTGTTTCTTTTACGGCAGAGAAGCTATCAGAATCGTGTTACTCCAAATGACATTGATAGCGATGGTGAAGATGTAGAGTTTGGTTGCATCAGTGGTGATTTTGGGGCTAAGGCAATGGAAGTTTTAGGCTCAAAATTTGTAGAATGTTCTGAAAATAAACAGTTCATAGGTATTTGA

Protein sequence

MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLWVFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDLGLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYGVLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCTETPRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGTVPGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDNHHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLASEMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDRNPISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEEENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDIDSDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQFIGI
Homology
[Close]
BLAST of CsaV3_4G005870 vs. NCBI nr
Match: XP_004146560.2 (PREDICTED: AT-rich interactive domain-containing protein 2 [Cucumis sativus] >KGN53331.1 hypothetical protein Csa_4G047920 [Cucumis sativus])

HSP 1 Score: 1318.1 bits (3410), Expect = 0.0e+00
Identity = 639/639 (100.00%), Postives = 639/639 (100.00%), Query Frame = 0 

Query: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW 60
           MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW
Sbjct: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW 60

Query: 61  VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120
           VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL
Sbjct: 61  VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120

Query: 121 GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG 180
           GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG
Sbjct: 121 GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG 180

Query: 181 VLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCTET 240
           VLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCTET
Sbjct: 181 VLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCTET 240

Query: 241 PRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGTV 300
           PRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGTV
Sbjct: 241 PRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGTV 300

Query: 301 PGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN 360
           PGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN
Sbjct: 301 PGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN 360

Query: 361 HHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLAS 420
           HHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLAS
Sbjct: 361 HHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLAS 420

Query: 421 EMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDRN 480
           EMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDRN
Sbjct: 421 EMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDRN 480

Query: 481 PISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE 540
           PISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE
Sbjct: 481 PISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE 540

Query: 541 ENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID 600
           ENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID
Sbjct: 541 ENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID 600

Query: 601 SDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQFIGI 640
           SDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQFIGI
Sbjct: 601 SDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQFIGI 639

[Close]
BLAST of CsaV3_4G005870 vs. NCBI nr
Match: XP_008452043.1 (PREDICTED: AT-rich interactive domain-containing protein 2 [Cucumis melo])

HSP 1 Score: 1242.3 bits (3213), Expect = 0.0e+00
Identity = 605/639 (94.68%), Postives = 616/639 (96.40%), Query Frame = 0 

Query: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW 60
           MGRWPISSNDSILDCNKDVDPNPS GYCIAPDCLVEGS ANVDHDDCKATIRCYFEK+LW
Sbjct: 1   MGRWPISSNDSILDCNKDVDPNPSNGYCIAPDCLVEGSRANVDHDDCKATIRCYFEKILW 60

Query: 61  VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120
           VFLKE CRRGFIRPVPALLGEG SLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL
Sbjct: 61  VFLKEICRRGFIRPVPALLGEGGSLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120

Query: 121 GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG 180
           GLSASVKLIYFKYLS+LEKWLMVRRGGTKLENGNSD YYYRK+FPCLAELEAKIKD+LYG
Sbjct: 121 GLSASVKLIYFKYLSELEKWLMVRRGGTKLENGNSDYYYYRKSFPCLAELEAKIKDMLYG 180

Query: 181 VLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCTET 240
           VLRQKSIYDER GFKSNKPNGNVNVAETAAEKEIK PKIEKKEHDLHEDVTPIQQNCTET
Sbjct: 181 VLRQKSIYDERPGFKSNKPNGNVNVAETAAEKEIKFPKIEKKEHDLHEDVTPIQQNCTET 240

Query: 241 PRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGTV 300
           PR NG+TNQIHVIGDCRS DAVNVETETDSHG SRESL RMLKWVRKTAKHPANPSNGTV
Sbjct: 241 PRVNGETNQIHVIGDCRSLDAVNVETETDSHGRSRESLLRMLKWVRKTAKHPANPSNGTV 300

Query: 301 PGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN 360
           P SSKWKAYAS+DALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN
Sbjct: 301 PESSKWKAYASDDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN 360

Query: 361 HHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLAS 420
           HHLSTERICCSRRSNAL+KSE VA NNSCPPV+SNQIGSLTTEIGKGLKNQALLNGDLAS
Sbjct: 361 HHLSTERICCSRRSNALAKSELVASNNSCPPVRSNQIGSLTTEIGKGLKNQALLNGDLAS 420

Query: 421 EMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDRN 480
           EMEDNQANEDSVEKPVPVGA FQA +PEWTGNISDSDSKWLGTR WPSQHENNKSVS+RN
Sbjct: 421 EMEDNQANEDSVEKPVPVGALFQAAIPEWTGNISDSDSKWLGTRLWPSQHENNKSVSNRN 480

Query: 481 PISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE 540
           PI RGRLD CSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE
Sbjct: 481 PIGRGRLDSCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE 540

Query: 541 ENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID 600
           E RFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID
Sbjct: 541 EKRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID 600

Query: 601 SDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQFIGI 640
           SD EDVEFGCISGDFGAKAME+LGSK VECSENKQFI I
Sbjct: 601 SDDEDVEFGCISGDFGAKAMEILGSKSVECSENKQFIDI 639

[Close]
BLAST of CsaV3_4G005870 vs. NCBI nr
Match: XP_022931397.1 (AT-rich interactive domain-containing protein 2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 958.0 bits (2475), Expect = 1.6e-275
Identity = 483/636 (75.94%), Postives = 533/636 (83.81%), Query Frame = 0 

Query: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW 60
           MGRW +SSN SILDCNKDVDPNPS G CIA DCLVE S  NVD+DDCKA IRCYFEK+LW
Sbjct: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW 60

Query: 61  VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120
           VFLKE  RRGF+RP+PAL+GEG +LDLFELF+VVRDKGG QVVSEK+LWSSVVVELGLDL
Sbjct: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120

Query: 121 GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG 180
           GLSASVKLIY KYLSDLEKWLMVR G TKLENG+SD Y Y+K+ P L+EL AKI  +LYG
Sbjct: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSD-YCYKKSSPFLSELGAKINGMLYG 180

Query: 181 VLRQKSIYDERSGFKSNKPNGNVNVAETAA-EKEIKSPKIEKKEHDLHEDVTPIQQNCTE 240
           V RQ SIYDE  GFKSNK NGNVNVA  AA EKEIK P+I+KKEHDLH DVT IQQ+CTE
Sbjct: 181 VPRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTE 240

Query: 241 TPRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGT 300
                  T+ IHVI D +S DAVNVE E +S G  RESL RMLKWVRKTAKHP +P NGT
Sbjct: 241 -------THPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGT 300

Query: 301 VPGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDD 360
           +PG+S+WK Y+S+DALWLQVI+AKDALL RK VDK AEKRLLIQKKV+MHP IYEDNI D
Sbjct: 301 IPGTSRWKGYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNI-D 360

Query: 361 NHHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLA 420
           NHHLSTERI CS+RS AL++S    C+NSCP V+SN I SLTTE+GKGLKNQA+LNGD+ 
Sbjct: 361 NHHLSTERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLNGDIP 420

Query: 421 SEMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDR 480
           SEMED+  NEDS E+ VPVGA  QA LPEWTGN SDSDSKWLGTRSWP QH N+ SV DR
Sbjct: 421 SEMEDDHPNEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDR 480

Query: 481 NPISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAE 540
             I RGR D C CQFPGSVEC+RFHIAEARMRLKLELG TF+ WRFHQMGEEISLQWT E
Sbjct: 481 RAIGRGRPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVE 540

Query: 541 EENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDI 600
           EE RFKELA+S FNN N+CFW++SL+WFPMKSRKNLISYYFNVFLLR RSYQNRVTPN I
Sbjct: 541 EEKRFKELAMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSI 600

Query: 601 DSDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQ 636
           DSD ED EFG +SG FG KAME+LGS  +ECS N+Q
Sbjct: 601 DSDDEDFEFGRVSGGFGDKAMEILGSNSLECSINRQ 627

[Close]
BLAST of CsaV3_4G005870 vs. NCBI nr
Match: XP_022984736.1 (AT-rich interactive domain-containing protein 2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 956.1 bits (2470), Expect = 6.2e-275
Identity = 483/636 (75.94%), Postives = 532/636 (83.65%), Query Frame = 0 

Query: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW 60
           MGRW +SSN SILDCNKDVDPNPS G CIA DCLVEG+ ANVD+DDCKA IRCYFEK+LW
Sbjct: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVEGTYANVDYDDCKARIRCYFEKILW 60

Query: 61  VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120
           VFLKE  RRGF+RP+PAL+GEG +LDLFELF+VVRDKGG QVVSEK+LWSSVVVELGLDL
Sbjct: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120

Query: 121 GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG 180
           GLSASVKLIY KYLSDLEKWLMVR G TKLENG+SD Y Y+K+ P L+EL AKI  +LYG
Sbjct: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSD-YCYKKSSPFLSELGAKINGMLYG 180

Query: 181 VLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCTET 240
           V RQ SIYDE  GFKSNK NGNVNVA  A EKEIK  +I+KKEHDLH DVTPIQQ+CTE 
Sbjct: 181 VPRQNSIYDECFGFKSNKQNGNVNVAAAAVEKEIKFSEIKKKEHDLHGDVTPIQQDCTE- 240

Query: 241 PRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGTV 300
                 T+ IHVI D +S DAVNVE E +S G  RESL RMLKWVRKTAKHP +P NGT+
Sbjct: 241 ------THPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTI 300

Query: 301 PGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN 360
            G+S+WK Y+S+DALWLQVI AKDALL RK VDK AEKRLLIQKKV+MHP IYEDNI DN
Sbjct: 301 LGASRWKGYSSDDALWLQVISAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNI-DN 360

Query: 361 HHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQI-GSLTTEIGKGLKNQALLNGDLA 420
           H LSTERI CS+R  A ++S    C+NSCP V+SN I  SLTTE+GKGLKNQA+LNGD+ 
Sbjct: 361 HRLSTERISCSKRFKASTESVFATCSNSCPTVRSNCISSSLTTEVGKGLKNQAVLNGDIP 420

Query: 421 SEMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDR 480
           SEMED+  NEDS E+ VPVGA  QA LPEWTGN SDSDSKWLGTR WP QH N+ SV DR
Sbjct: 421 SEMEDDHPNEDSAEETVPVGALCQADLPEWTGNNSDSDSKWLGTRLWPLQHRNSNSVRDR 480

Query: 481 NPISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAE 540
             I RGR D C CQFPGSVEC+RFHIAEARMRLKLELG TF+ WRFHQMGEEISLQWTAE
Sbjct: 481 RAIGRGRPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTAE 540

Query: 541 EENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDI 600
           EE RFKELA+SSFNN N+CFW++SL+WFPMKSRKNLISYYFNVFLLR RSYQNRVTPN I
Sbjct: 541 EEKRFKELAMSSFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSI 600

Query: 601 DSDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQ 636
           DSD ED EFGC+SG FG KAMEVLGSK +ECS N+Q
Sbjct: 601 DSDDEDFEFGCVSGGFGDKAMEVLGSKSLECSINRQ 627

[Close]
BLAST of CsaV3_4G005870 vs. NCBI nr
Match: XP_022984737.1 (AT-rich interactive domain-containing protein 2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 937.6 bits (2422), Expect = 2.3e-269
Identity = 476/636 (74.84%), Postives = 524/636 (82.39%), Query Frame = 0 

Query: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW 60
           MGRW +SSN SILDCNKDVDPNPS G CIA DCLVEG+ ANVD+DDCKA IRCYFEK+LW
Sbjct: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVEGTYANVDYDDCKARIRCYFEKILW 60

Query: 61  VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120
           VFLKE  RRGF+RP+PAL+GEG +LDLFELF+VVRDKGG QVVSEK+LWSSVVVELGLDL
Sbjct: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120

Query: 121 GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG 180
           GLSASVKLIY KYLSDLEKWLMVR G TKLENG+SD Y Y+K+ P L+EL AKI  +LYG
Sbjct: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSD-YCYKKSSPFLSELGAKINGMLYG 180

Query: 181 VLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCTET 240
           V RQ SIYDE  GFKSNK NGNVNVA  A EKEIK  +I+KKEHDLH DVTPIQQ+CTE 
Sbjct: 181 VPRQNSIYDECFGFKSNKQNGNVNVAAAAVEKEIKFSEIKKKEHDLHGDVTPIQQDCTE- 240

Query: 241 PRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGTV 300
                 T+ IHVI           E E +S G  RESL RMLKWVRKTAKHP +P NGT+
Sbjct: 241 ------THPIHVI-----------EAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTI 300

Query: 301 PGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN 360
            G+S+WK Y+S+DALWLQVI AKDALL RK VDK AEKRLLIQKKV+MHP IYEDNI DN
Sbjct: 301 LGASRWKGYSSDDALWLQVISAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNI-DN 360

Query: 361 HHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQI-GSLTTEIGKGLKNQALLNGDLA 420
           H LSTERI CS+R  A ++S    C+NSCP V+SN I  SLTTE+GKGLKNQA+LNGD+ 
Sbjct: 361 HRLSTERISCSKRFKASTESVFATCSNSCPTVRSNCISSSLTTEVGKGLKNQAVLNGDIP 420

Query: 421 SEMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDR 480
           SEMED+  NEDS E+ VPVGA  QA LPEWTGN SDSDSKWLGTR WP QH N+ SV DR
Sbjct: 421 SEMEDDHPNEDSAEETVPVGALCQADLPEWTGNNSDSDSKWLGTRLWPLQHRNSNSVRDR 480

Query: 481 NPISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAE 540
             I RGR D C CQFPGSVEC+RFHIAEARMRLKLELG TF+ WRFHQMGEEISLQWTAE
Sbjct: 481 RAIGRGRPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTAE 540

Query: 541 EENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDI 600
           EE RFKELA+SSFNN N+CFW++SL+WFPMKSRKNLISYYFNVFLLR RSYQNRVTPN I
Sbjct: 541 EEKRFKELAMSSFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSI 600

Query: 601 DSDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQ 636
           DSD ED EFGC+SG FG KAMEVLGSK +ECS N+Q
Sbjct: 601 DSDDEDFEFGCVSGGFGDKAMEVLGSKSLECSINRQ 616

[Close]
BLAST of CsaV3_4G005870 vs. TAIR10
Match: AT4G11400.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein)

HSP 1 Score: 320.9 bits (821), Expect = 1.8e-87
Identity = 219/620 (35.32%), Postives = 322/620 (51.94%), Query Frame = 0 

Query: 38  SCANVD-----HDDCKATIRCYFEKVLWVFLKETCRRGFIRPVPALLGEGESLDLFELFM 97
           SC+ VD      D+C+  +R  F++ L VFL+E    G I+P+PA++G+G+++DLF+LF+
Sbjct: 8   SCSYVDVEIKYVDECEERLRRLFDQALLVFLEE---EGSIKPLPAVIGDGKNVDLFKLFV 67

Query: 98  VVRDKGGYQVVSEKELWSSVVVELGLDLGLSASVKLIYFKYLSDLEKWLMVRRGGTKLEN 157
           +VR++ G+  VS K LW  V  +LG D  L  S+ LIY KYL+ +EKW +        +N
Sbjct: 68  LVREREGFDTVSRKRLWEVVAEKLGFDCSLVPSLILIYLKYLNRMEKWAVEESRIVNWDN 127

Query: 158 GNSD---CYYYRKNFPCLAELEAKIKDILYGVLRQKSIYDERSGFKSNKPNGNVNVAETA 217
            +S+   CY                            +++  +GFKS   NG        
Sbjct: 128 KDSEKKGCY-------------------------SGMLHELGNGFKSLLDNG-------- 187

Query: 218 AEKEIKSPKIEKKEHDLHEDVTPIQQNCTETPRDNGKTNQIHVIGDCRSSDAVNVETET- 277
                   K +K+   +      ++++C+E  R   +  +           +V +  ET 
Sbjct: 188 --------KCQKRNRAVAFGCNHMEESCSEFDRSRKRFRESDDDDKGVGLSSVVIREETV 247

Query: 278 ---------DSHGSSRESLFRMLKWVRKTAKHPANPSNGTVPGSSKWKAYASEDALWLQV 337
                    D     R+ L  MLKW+   A  P +P+ G +P SSKWK Y + +  WLQV
Sbjct: 248 VCAVEEGLSDFSLEKRDDLPGMLKWLALVATSPHDPAIGVIPHSSKWKQY-NGNKCWLQV 307

Query: 338 IKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDNHHLSTERICCSRRSNALSK 397
            +AK++LL ++D    AE R       R H  I+  ++ ++   S  R+  S R   LSK
Sbjct: 308 ARAKNSLLVQRD---NAELRYRYH-PFRGHQNIHHPSMYEDDRKSIGRLRYSIRPPNLSK 367

Query: 398 SESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLASEMEDNQANEDSV-EKPVPV 457
             S +C N    V  ++  S +T+  K     +   G  A      + N+  +  + + V
Sbjct: 368 HCSSSCCNGSSLVSLSK--SRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKV 427

Query: 458 GASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSD---RNPISRGRLDPCSCQFP 517
           G   QA + EWT +  DSDSKWLGTR WP   EN++++      + + +GR D CSC+  
Sbjct: 428 GHQHQAQVDEWTESGVDSDSKWLGTRIWPP--ENSEALDQTLGNDLVGKGRPDSCSCELS 487

Query: 518 GSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEEENRFKELAISSFNNQ 577
           G VEC R HIAE RM LK ELG  F+ WRF+QMGEE+ L+WT EEE RFK++ I+     
Sbjct: 488 GFVECTRLHIAEKRMELKRELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIA----D 547

Query: 578 NQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDIDSDGEDVEFGCISGDF 636
            Q FW ++ K FP K R+ L+SYYFNVFL+ +R YQNRVTP  IDSD E   FG + G F
Sbjct: 548 PQSFWTNAAKNFPKKKREELVSYYFNVFLINRRRYQNRVTPKSIDSDDEGA-FGSVGGSF 569

[Close]
BLAST of CsaV3_4G005870 vs. TAIR10
Match: AT2G46040.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein)

HSP 1 Score: 248.8 bits (634), Expect = 8.9e-66
Identity = 189/571 (33.10%), Postives = 272/571 (47.64%), Query Frame = 0 

Query: 55  FEKVLWVFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVV 114
           F  +L  FL E C      P+PA+ GEG ++DLF LF+ V  KGG+  VSE   W  VV 
Sbjct: 49  FRPLLDSFLAEFCSADGFLPLPAMTGEGRTVDLFNLFLNVTHKGGFDAVSENGSWDEVVQ 108

Query: 115 ELGLDLGLSASVKLIYFKYLSDLEKWL-MVRRGGTKLE----NGNSDCYYYRKNFPCLAE 174
           E GL+   SAS KLIY KYL    +WL  V  G T +     +G SD    R N   L+E
Sbjct: 109 ESGLESYDSASAKLIYVKYLDAFGRWLNRVVAGDTDVSSVELSGISDALVARLN-GFLSE 168

Query: 175 LEAKIK------------DILYGVLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSP 234
           ++ K +            ++ + + + K  YD+    K +  N         A KE +  
Sbjct: 169 VKKKYELRKGRPAKELGAELKWFISKTKRRYDKHHVGKESASND--------AVKEFQGS 228

Query: 235 KIEKKEHDLHEDVTPIQQNCTETPRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRES 294
           K+ ++  +    +  + Q C+      GK                            RE 
Sbjct: 229 KLAERRLEQIMILESVTQECSSP----GK--------------------------RKREC 288

Query: 295 LFRMLKWVRKTAKHPANPSNGTVPGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAE 354
               LKW+   AK P +PS G VP  S+W +Y SE+  W Q++  +    +R + D   E
Sbjct: 289 PLETLKWLSDVAKDPCDPSLGIVPDRSEWVSYGSEEP-WKQLLLFR---ASRTNNDSACE 348

Query: 355 KRLLIQKKVRMHPCIYEDNIDDNHHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQI 414
           K    QK  +MHPC+Y+D+   +++L  ER+                   S    +  + 
Sbjct: 349 KTW--QKVQKMHPCLYDDSAGASYNL-RERL-------------------SYEDYKRGKT 408

Query: 415 GSLTTEIGKGLKNQALLNGDLASEMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSD 474
           G+  ++IG             +S+ ED             VG+ FQA +PEWTG   +SD
Sbjct: 409 GN-GSDIG-------------SSDEEDRPC--------ALVGSKFQAKVPEWTGITPESD 468

Query: 475 SKWLGTRSWPSQHENNKS--VSDRNPISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLE 534
           SKWLGTR WP   E  K+  + +R+ I +GR DPC C  PGS+EC +FHI   R +LKLE
Sbjct: 469 SKWLGTRIWPLTKEQTKANLLIERDRIGKGRQDPCGCHNPGSIECVKFHITAKRDKLKLE 528

Query: 535 LGLTFYDWRFHQMGEEISLQWTAEEENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNL 594
           LG  FY W F  MGE     WT  E  + K L +SS  + +  F + +    P KSR  +
Sbjct: 529 LGPAFYMWCFDVMGECTLQYWTDLELKKIKSL-MSSPPSLSPAFIHQAKMILPSKSRGKI 531

Query: 595 ISYYFNVFLLRQRSYQNRVTPNDIDSDGEDV 607
           +SY++NV LL+ R+ Q+R+TP+DIDSD + +
Sbjct: 589 VSYFYNVTLLQYRASQSRITPHDIDSDTDQI 531

[Close]
BLAST of CsaV3_4G005870 vs. TAIR10
Match: AT5G04110.1 (DNA GYRASE B3)

HSP 1 Score: 126.3 bits (316), Expect = 6.6e-29
Identity = 70/180 (38.89%), Postives = 102/180 (56.67%), Query Frame = 0 

Query: 436 VPVGASFQAVLPEWT---------GNISDSDS-KWLGTRSWPSQHENNKSVSDRNPISRG 495
           +P+G  FQA +P W          G+  DS++ +WLGT  WP+ +   K+V  +  +  G
Sbjct: 361 IPIGPRFQAEIPVWIAPTKKGKFYGSPGDSNTLRWLGTGVWPT-YSLKKTVHSKK-VGEG 420

Query: 496 RLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQ-WTAEEENRF 555
           R D CSC  P S  C + H  EA+  L+ E+   F  W F QMGEEI L+ WTA+EE RF
Sbjct: 421 RSDSCSCASPRSTNCIKRHKKEAQELLEKEINRAFSTWEFDQMGEEIVLKSWTAKEERRF 480

Query: 556 KELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDIDSDGE 605
           + L   +  + +  FW  +   FP KS+K+L+SYY+NVFL+++         N+IDSD +
Sbjct: 481 EALVKKNPLSSSDGFWEFASNAFPQKSKKDLLSYYYNVFLIKRMRLLKSSAANNIDSDDD 538

[Close]
BLAST of CsaV3_4G005870 vs. TAIR10
Match: AT1G26580.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 99.8 bits (247), Expect = 6.7e-21
Identity = 73/211 (34.60%), Postives = 103/211 (48.82%), Query Frame = 0 

Query: 429 EDSVEKPVPVGASFQAVLPEW----TGNISDS-------------DSKWLGTRSWPSQHE 488
           +   +K VP+G   QA +PEW    TGNI  S               K  GT   P    
Sbjct: 128 DQRAKKQVPIGPGHQAEIPEWEGSQTGNIETSGMSVQNHISGCADGEKLFGTSVIPMPGL 187

Query: 489 NNKSVSDRNPISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELG-LTFYDWRFHQMGE 548
              +  D + + +GR   C C+   SV C   HI EAR  L    G  TF +    +MGE
Sbjct: 188 TTVAHID-DIVGKGR-KFCVCRDRDSVRCVCQHIKEAREELVKTFGNETFKELGLCEMGE 247

Query: 549 EISLQWTAEEENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSY 608
           + +L+W+ E+   F E+  S+     Q FW H    F  +++K ++S+YFNVF+LR+R+ 
Sbjct: 248 KGALKWSDEDAQLFHEVVYSNPVTLGQNFWRHLEAAFCSRTQKEIVSFYFNVFVLRRRAI 307

Query: 609 QNRVTPNDIDSDGEDVEFGCISGDFGAKAME 622
           QNR    DIDSD +D   GC  G  G + +E
Sbjct: 308 QNRAFILDIDSD-DDEWHGCYGGSSGTRYVE 335

[Close]
BLAST of CsaV3_4G005870 vs. TAIR10
Match: AT1G13880.1 (ELM2 domain-containing protein)

HSP 1 Score: 95.9 bits (237), Expect = 9.6e-20
Identity = 66/210 (31.43%), Postives = 108/210 (51.43%), Query Frame = 0 

Query: 418 LASEMEDNQANEDSVEKPVPVGASFQAVLPEWT-GNISDSDSKWLGTRSWPSQHENNKSV 477
           + S  ED      S  K VP+G+ +QA +PE      +D   + +G   +  +    K V
Sbjct: 110 VCSGEEDGYWCPISPRKTVPIGSDYQADIPECVKEEANDQSGQGVG---YDEEQVTGKCV 169

Query: 478 -------SDRNPISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGL-TFYDWRFHQM 537
                  ++   I +GR + C C   GS+ C + HI E R  L   +G     D    +M
Sbjct: 170 IPMPDCETEVCKIGKGRKE-CICLDKGSIRCVQQHIMENREDLFATIGYDRCLDIGLCEM 229

Query: 538 GEEISLQWTAEEENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQR 597
           GEE++ + T +EE+ F E+  S+  + ++ FW H    FP ++ K ++SYYFNVF+LR+R
Sbjct: 230 GEEVAARLTEDEEDLFHEIVYSNPVSMDRDFWKHLKSAFPSRTMKEIVSYYFNVFILRRR 289

Query: 598 SYQNRVTPNDIDSDGEDVEFGCISGDFGAK 619
           + QNR    D+DSD ++ +    +  +GA+
Sbjct: 290 AIQNRSKSLDVDSDDDEWQVEYDNTFYGAE 315

[Close]
BLAST of CsaV3_4G005870 vs. Swiss-Prot
Match: sp|Q9LDD4|ARID2_ARATH (AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=ARID2 PE=1 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-86
Identity = 219/620 (35.32%), Postives = 322/620 (51.94%), Query Frame = 0 

Query: 38  SCANVD-----HDDCKATIRCYFEKVLWVFLKETCRRGFIRPVPALLGEGESLDLFELFM 97
           SC+ VD      D+C+  +R  F++ L VFL+E    G I+P+PA++G+G+++DLF+LF+
Sbjct: 8   SCSYVDVEIKYVDECEERLRRLFDQALLVFLEE---EGSIKPLPAVIGDGKNVDLFKLFV 67

Query: 98  VVRDKGGYQVVSEKELWSSVVVELGLDLGLSASVKLIYFKYLSDLEKWLMVRRGGTKLEN 157
           +VR++ G+  VS K LW  V  +LG D  L  S+ LIY KYL+ +EKW +        +N
Sbjct: 68  LVREREGFDTVSRKRLWEVVAEKLGFDCSLVPSLILIYLKYLNRMEKWAVEESRIVNWDN 127

Query: 158 GNSD---CYYYRKNFPCLAELEAKIKDILYGVLRQKSIYDERSGFKSNKPNGNVNVAETA 217
            +S+   CY                            +++  +GFKS   NG        
Sbjct: 128 KDSEKKGCY-------------------------SGMLHELGNGFKSLLDNG-------- 187

Query: 218 AEKEIKSPKIEKKEHDLHEDVTPIQQNCTETPRDNGKTNQIHVIGDCRSSDAVNVETET- 277
                   K +K+   +      ++++C+E  R   +  +           +V +  ET 
Sbjct: 188 --------KCQKRNRAVAFGCNHMEESCSEFDRSRKRFRESDDDDKGVGLSSVVIREETV 247

Query: 278 ---------DSHGSSRESLFRMLKWVRKTAKHPANPSNGTVPGSSKWKAYASEDALWLQV 337
                    D     R+ L  MLKW+   A  P +P+ G +P SSKWK Y + +  WLQV
Sbjct: 248 VCAVEEGLSDFSLEKRDDLPGMLKWLALVATSPHDPAIGVIPHSSKWKQY-NGNKCWLQV 307

Query: 338 IKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDNHHLSTERICCSRRSNALSK 397
            +AK++LL ++D    AE R       R H  I+  ++ ++   S  R+  S R   LSK
Sbjct: 308 ARAKNSLLVQRD---NAELRYRYH-PFRGHQNIHHPSMYEDDRKSIGRLRYSIRPPNLSK 367

Query: 398 SESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLASEMEDNQANEDSV-EKPVPV 457
             S +C N    V  ++  S +T+  K     +   G  A      + N+  +  + + V
Sbjct: 368 HCSSSCCNGSSLVSLSK--SRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKV 427

Query: 458 GASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSD---RNPISRGRLDPCSCQFP 517
           G   QA + EWT +  DSDSKWLGTR WP   EN++++      + + +GR D CSC+  
Sbjct: 428 GHQHQAQVDEWTESGVDSDSKWLGTRIWPP--ENSEALDQTLGNDLVGKGRPDSCSCELS 487

Query: 518 GSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEEENRFKELAISSFNNQ 577
           G VEC R HIAE RM LK ELG  F+ WRF+QMGEE+ L+WT EEE RFK++ I+     
Sbjct: 488 GFVECTRLHIAEKRMELKRELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIA----D 547

Query: 578 NQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDIDSDGEDVEFGCISGDF 636
            Q FW ++ K FP K R+ L+SYYFNVFL+ +R YQNRVTP  IDSD E   FG + G F
Sbjct: 548 PQSFWTNAAKNFPKKKREELVSYYFNVFLINRRRYQNRVTPKSIDSDDEGA-FGSVGGSF 569

[Close]
BLAST of CsaV3_4G005870 vs. Swiss-Prot
Match: sp|Q84JT7|ARID1_ARATH (AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ARID1 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.6e-64
Identity = 189/571 (33.10%), Postives = 272/571 (47.64%), Query Frame = 0 

Query: 55  FEKVLWVFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVV 114
           F  +L  FL E C      P+PA+ GEG ++DLF LF+ V  KGG+  VSE   W  VV 
Sbjct: 49  FRPLLDSFLAEFCSADGFLPLPAMTGEGRTVDLFNLFLNVTHKGGFDAVSENGSWDEVVQ 108

Query: 115 ELGLDLGLSASVKLIYFKYLSDLEKWL-MVRRGGTKLE----NGNSDCYYYRKNFPCLAE 174
           E GL+   SAS KLIY KYL    +WL  V  G T +     +G SD    R N   L+E
Sbjct: 109 ESGLESYDSASAKLIYVKYLDAFGRWLNRVVAGDTDVSSVELSGISDALVARLN-GFLSE 168

Query: 175 LEAKIK------------DILYGVLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSP 234
           ++ K +            ++ + + + K  YD+    K +  N         A KE +  
Sbjct: 169 VKKKYELRKGRPAKELGAELKWFISKTKRRYDKHHVGKESASND--------AVKEFQGS 228

Query: 235 KIEKKEHDLHEDVTPIQQNCTETPRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRES 294
           K+ ++  +    +  + Q C+      GK                            RE 
Sbjct: 229 KLAERRLEQIMILESVTQECSSP----GK--------------------------RKREC 288

Query: 295 LFRMLKWVRKTAKHPANPSNGTVPGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAE 354
               LKW+   AK P +PS G VP  S+W +Y SE+  W Q++  +    +R + D   E
Sbjct: 289 PLETLKWLSDVAKDPCDPSLGIVPDRSEWVSYGSEEP-WKQLLLFR---ASRTNNDSACE 348

Query: 355 KRLLIQKKVRMHPCIYEDNIDDNHHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQI 414
           K    QK  +MHPC+Y+D+   +++L  ER+                   S    +  + 
Sbjct: 349 KTW--QKVQKMHPCLYDDSAGASYNL-RERL-------------------SYEDYKRGKT 408

Query: 415 GSLTTEIGKGLKNQALLNGDLASEMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSD 474
           G+  ++IG             +S+ ED             VG+ FQA +PEWTG   +SD
Sbjct: 409 GN-GSDIG-------------SSDEEDRPC--------ALVGSKFQAKVPEWTGITPESD 468

Query: 475 SKWLGTRSWPSQHENNKS--VSDRNPISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLE 534
           SKWLGTR WP   E  K+  + +R+ I +GR DPC C  PGS+EC +FHI   R +LKLE
Sbjct: 469 SKWLGTRIWPLTKEQTKANLLIERDRIGKGRQDPCGCHNPGSIECVKFHITAKRDKLKLE 528

Query: 535 LGLTFYDWRFHQMGEEISLQWTAEEENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNL 594
           LG  FY W F  MGE     WT  E  + K L +SS  + +  F + +    P KSR  +
Sbjct: 529 LGPAFYMWCFDVMGECTLQYWTDLELKKIKSL-MSSPPSLSPAFIHQAKMILPSKSRGKI 531

Query: 595 ISYYFNVFLLRQRSYQNRVTPNDIDSDGEDV 607
           +SY++NV LL+ R+ Q+R+TP+DIDSD + +
Sbjct: 589 VSYFYNVTLLQYRASQSRITPHDIDSDTDQI 531

[Close]
BLAST of CsaV3_4G005870 vs. TrEMBL
Match: tr|A0A0A0KZM1|A0A0A0KZM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047920 PE=4 SV=1)

HSP 1 Score: 1318.1 bits (3410), Expect = 0.0e+00
Identity = 639/639 (100.00%), Postives = 639/639 (100.00%), Query Frame = 0 

Query: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW 60
           MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW
Sbjct: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW 60

Query: 61  VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120
           VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL
Sbjct: 61  VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120

Query: 121 GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG 180
           GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG
Sbjct: 121 GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG 180

Query: 181 VLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCTET 240
           VLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCTET
Sbjct: 181 VLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCTET 240

Query: 241 PRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGTV 300
           PRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGTV
Sbjct: 241 PRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGTV 300

Query: 301 PGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN 360
           PGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN
Sbjct: 301 PGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN 360

Query: 361 HHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLAS 420
           HHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLAS
Sbjct: 361 HHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLAS 420

Query: 421 EMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDRN 480
           EMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDRN
Sbjct: 421 EMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDRN 480

Query: 481 PISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE 540
           PISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE
Sbjct: 481 PISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE 540

Query: 541 ENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID 600
           ENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID
Sbjct: 541 ENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID 600

Query: 601 SDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQFIGI 640
           SDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQFIGI
Sbjct: 601 SDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQFIGI 639

[Close]
BLAST of CsaV3_4G005870 vs. TrEMBL
Match: tr|A0A1S3BSW2|A0A1S3BSW2_CUCME (AT-rich interactive domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103493169 PE=4 SV=1)

HSP 1 Score: 1242.3 bits (3213), Expect = 0.0e+00
Identity = 605/639 (94.68%), Postives = 616/639 (96.40%), Query Frame = 0 

Query: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW 60
           MGRWPISSNDSILDCNKDVDPNPS GYCIAPDCLVEGS ANVDHDDCKATIRCYFEK+LW
Sbjct: 1   MGRWPISSNDSILDCNKDVDPNPSNGYCIAPDCLVEGSRANVDHDDCKATIRCYFEKILW 60

Query: 61  VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120
           VFLKE CRRGFIRPVPALLGEG SLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL
Sbjct: 61  VFLKEICRRGFIRPVPALLGEGGSLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120

Query: 121 GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG 180
           GLSASVKLIYFKYLS+LEKWLMVRRGGTKLENGNSD YYYRK+FPCLAELEAKIKD+LYG
Sbjct: 121 GLSASVKLIYFKYLSELEKWLMVRRGGTKLENGNSDYYYYRKSFPCLAELEAKIKDMLYG 180

Query: 181 VLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCTET 240
           VLRQKSIYDER GFKSNKPNGNVNVAETAAEKEIK PKIEKKEHDLHEDVTPIQQNCTET
Sbjct: 181 VLRQKSIYDERPGFKSNKPNGNVNVAETAAEKEIKFPKIEKKEHDLHEDVTPIQQNCTET 240

Query: 241 PRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNGTV 300
           PR NG+TNQIHVIGDCRS DAVNVETETDSHG SRESL RMLKWVRKTAKHPANPSNGTV
Sbjct: 241 PRVNGETNQIHVIGDCRSLDAVNVETETDSHGRSRESLLRMLKWVRKTAKHPANPSNGTV 300

Query: 301 PGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN 360
           P SSKWKAYAS+DALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN
Sbjct: 301 PESSKWKAYASDDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNIDDN 360

Query: 361 HHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDLAS 420
           HHLSTERICCSRRSNAL+KSE VA NNSCPPV+SNQIGSLTTEIGKGLKNQALLNGDLAS
Sbjct: 361 HHLSTERICCSRRSNALAKSELVASNNSCPPVRSNQIGSLTTEIGKGLKNQALLNGDLAS 420

Query: 421 EMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVSDRN 480
           EMEDNQANEDSVEKPVPVGA FQA +PEWTGNISDSDSKWLGTR WPSQHENNKSVS+RN
Sbjct: 421 EMEDNQANEDSVEKPVPVGALFQAAIPEWTGNISDSDSKWLGTRLWPSQHENNKSVSNRN 480

Query: 481 PISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE 540
           PI RGRLD CSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE
Sbjct: 481 PIGRGRLDSCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWTAEE 540

Query: 541 ENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID 600
           E RFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID
Sbjct: 541 EKRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPNDID 600

Query: 601 SDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQFIGI 640
           SD EDVEFGCISGDFGAKAME+LGSK VECSENKQFI I
Sbjct: 601 SDDEDVEFGCISGDFGAKAMEILGSKSVECSENKQFIDI 639

[Close]
BLAST of CsaV3_4G005870 vs. TrEMBL
Match: tr|M5W8M5|M5W8M5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G103500 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 8.4e-127
Identity = 280/638 (43.89%), Postives = 371/638 (58.15%), Query Frame = 0 

Query: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDHDDCKATIRCYFEKVLW 60
           M  W   +  S+LDC +  D     G CI  D  V       D DD +  +RC F++VL 
Sbjct: 1   MAGWSSLTPGSVLDCVETNDAYQKNGSCIGSDIDVRDG-VECDEDDDEVRLRCTFDQVLS 60

Query: 61  VFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDL 120
           VF+KE   RG +RP+PA++ + + +DLF+LF +VRD+GGY  VS+  LWS V  ELGLD 
Sbjct: 61  VFVKEIGDRGVVRPIPAVIDDRQPVDLFKLFCLVRDRGGYDWVSKNSLWSFVAKELGLDG 120

Query: 121 GLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLAELEAKIKDILYG 180
           G +ASVKLIYFKYL++LEKW           NG S  Y     F   +ELE + +D+L  
Sbjct: 121 GATASVKLIYFKYLNELEKWFRESCKSRSSGNGQSGLY---GEFQLSSELEREFRDLLLD 180

Query: 181 VLRQKSIYDERSGFKSNKPNGNV--NVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQNCT 240
              QK   D    F+S++ NG +  N+++T     + +   + K+ D  E V    QN  
Sbjct: 181 GPEQKGKGDGPVQFESDE-NGKIEFNLSDTKDAYGMHAGADQCKDDD-EEKVCNDDQN-- 240

Query: 241 ETPRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPANPSNG 300
                          G   S D++N   + +     RESL  ML WV + AK P +PS G
Sbjct: 241 ---------------GVLISLDSLN--KKENDRKRKRESLSGMLNWVVQIAKQPNDPSIG 300

Query: 301 TVPGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIYEDNID 360
            +PG + W+ +   D  W QVI+A++ALL R++VD   E+ LL QKK++ HP +YEDN+ 
Sbjct: 301 VIPGPTNWREHKG-DECWFQVIRAREALLLRRNVDSKTEESLL-QKKLKTHPLLYEDNVV 360

Query: 361 DNHHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQALLNGDL 420
             H  S+ER+ CS R     KS S  C +SC   QSN I     E+    K QA    DL
Sbjct: 361 AGHQ-SSERLRCSERFPNSVKSRSCPCCSSCSVPQSNLISPRKKELDNNSKEQAPEEVDL 420

Query: 421 ASEMEDNQANEDSV-EKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENNKSVS 480
            +       + D+  EK V VG  FQA +PEWTG  S+SD KWLGTR WP Q E + S+ 
Sbjct: 421 LATNTMVCPSVDAPHEKHVSVGTLFQADVPEWTGVASESDIKWLGTRVWPLQCEEDSSLH 480

Query: 481 DRNPISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEISLQWT 540
           + +   +GR D C CQ PGSV C RFHIAEARM+LK ELG  FY WRF +MGEE+SLQWT
Sbjct: 481 EADLTGKGRPDLCGCQLPGSVVCIRFHIAEARMKLKRELGSLFYRWRFDRMGEEVSLQWT 540

Query: 541 AEEENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNRVTPN 600
           AEEE RFK+L  S+    +  FWN + +WF  K+R+NL+SYYFNVFL++ RSYQNRVTP 
Sbjct: 541 AEEEKRFKDLVKSN----SPSFWNRASRWFRKKTRENLVSYYFNVFLVQSRSYQNRVTPK 600

Query: 601 DIDSDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQ 636
           +IDSD ++ EFG  S  F   A+EV  + F  CS+N+Q
Sbjct: 601 NIDSDDDETEFGSFSNGFRHDAVEV-SANFEACSQNQQ 605

[Close]
BLAST of CsaV3_4G005870 vs. TrEMBL
Match: tr|A0A2P6P6S3|A0A2P6P6S3_ROSCH (Putative transcription factor & chromatin remodeling ARID family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0197161 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.7e-124
Identity = 289/658 (43.92%), Postives = 369/658 (56.08%), Query Frame = 0 

Query: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAP--DCLVEG-SCANVDHDDCKATI------ 60
           M  W +S+N S+LD  +  D NP  G  +    + + +G  C   D DD K         
Sbjct: 1   MAGWSVSTNGSVLDLAEITDANPINGDSLGSGIESVKDGVECGGDDDDDHKXXXXXXXXX 60

Query: 61  ----------RCYFEKVLWVFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQ 120
                     RC F++VL VFLK+   RG +RPVPA+ G+ + +DLF+LF VVRDKGGY 
Sbjct: 61  XXXXXYRGRQRCTFDQVLSVFLKDIGDRGVVRPVPAVFGDRQHVDLFKLFCVVRDKGGYD 120

Query: 121 VVSEKELWSSVVVELGLDLG--LSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYY 180
           +VS K LWS V  ELGL  G   +ASVKLIY KYL++LE W   R   T    GN +   
Sbjct: 121 LVSNKRLWSFVSKELGLLDGGATAASVKLIYSKYLNELEIWF--RESCTSRSLGNGESGR 180

Query: 181 YRKNFPCLAELEAKIKDILYGVLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKI 240
           Y  +     ELE + + +L     QK   D     +S++ NG                KI
Sbjct: 181 YGTSHLLSLELEREFRGLLLDGTEQKDNGDGLVHLESDQ-NG----------------KI 240

Query: 241 EKKEHDLHEDVTPIQQNCTETPRDNGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLF 300
           E    D  +  T      T    D+         G      +V+   E D     RESL 
Sbjct: 241 EYSLSDTKDACTMHSGTGTCNGDDDENVCNDDQNGTLILPSSVD-NKEIDRKRKRRESLS 300

Query: 301 RMLKWVRKTAKHPANPSNGTVPGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKR 360
            ML WV +TA    + S G +PG +KW  +   +  W Q IKA+DAL+ R+D+    E+ 
Sbjct: 301 GMLNWVIQTATQVGDASIGVIPGPAKWNKHEGNE-FWFQAIKARDALMLRRDITPKTEE- 360

Query: 361 LLIQKKVRMHPCIYEDNIDDNHHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGS 420
           LL QKK+RMHP +YED I   HH S+ER+ C  R    +KS S  C NS PP QSN I S
Sbjct: 361 LLQQKKLRMHPLMYEDTIAAGHH-SSERLRCRGRIPQSTKSRSCTCCNSLPPTQSNLI-S 420

Query: 421 LTTEIGKGLKNQALLNGDLASEMEDNQANED--SVEKPVPVGASFQAVLPEWTGNISDSD 480
               +    K Q  +  DLAS       ++D  S EK V VG   QA +PEWT   S+SD
Sbjct: 421 PHMVLHDDSKEQEPMEVDLASPHRSVIPSDDDESREKYVSVGPLSQADVPEWTDVASESD 480

Query: 481 SKWLGTRSWPSQHENNKSVSDRNPISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELG 540
           SKWLGTR WP Q E + S+ + + I RGR D C CQ PGSV C+RFHIAEARM+LK ELG
Sbjct: 481 SKWLGTRVWPLQCEEDNSLVETDIIGRGRPDSCGCQLPGSVTCHRFHIAEARMKLKKELG 540

Query: 541 LTFYDWRFHQMGEEISLQWTAEEENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLIS 600
             FY WRF +MGEEISLQWTAEEE RFK L  S +      FWN + KWFP K+R+NL+S
Sbjct: 541 SLFYHWRFDRMGEEISLQWTAEEEKRFKTLVQSKY----PLFWNSASKWFPRKTRENLVS 600

Query: 601 YYFNVFLLRQRSYQNRVTPNDIDSDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQ 636
           YYFNVFL+++RSYQNRVTP +IDSD ++ +F  +S  FG +A++V GS F+ CS+NKQ
Sbjct: 601 YYFNVFLVKRRSYQNRVTPKNIDSDDDETDFVSLSEGFGHEAVKVSGSNFLACSQNKQ 630

[Close]
BLAST of CsaV3_4G005870 vs. TrEMBL
Match: tr|A0A2C9WIA7|A0A2C9WIA7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G060100 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 1.1e-123
Identity = 276/642 (42.99%), Postives = 375/642 (58.41%), Query Frame = 0 

Query: 1   MGRWPISSNDSILDCNKDVDPNPSYGYCIAPDCLVEGSCANVDH---DDCKATIRCYFEK 60
           M  W + +N S LDC   +  N   G   + D   E    N  H   DD +  +RC F++
Sbjct: 1   MAGWSMLANGSSLDCADII--NGCKGNACSTDANHEAKDRNAVHESDDDYEVKLRCLFDQ 60

Query: 61  VLWVFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELG 120
           VL VF  E   RG IRP+PALL +G+SLDLF+LF VVR++GG+ +V+    W+ VV ELG
Sbjct: 61  VLSVFTNEAASRGCIRPLPALLPDGQSLDLFKLFRVVRNRGGFDLVN--GFWTFVVKELG 120

Query: 121 LDLGLSASVKLIYFKYLSDLEKWLMVRRGGTKLENGNSDCYYYRKNFPCLA-ELEAKIKD 180
           LD+  S SVKLIYFKYL +LE+W        KL  G     +   N  CL+ ELE + + 
Sbjct: 121 LDIRASTSVKLIYFKYLYELERWSRGSFRDGKLATGQC---HLDGNLSCLSTELETEFRS 180

Query: 181 ILYGVLRQKSIYDERSGFKSNKPNGNVNVAETAAEKEIKSPKIEKKEHDLHEDVTPIQQN 240
           +L         Y +    K  K   N+N+    ++K +   K      DLHE    I   
Sbjct: 181 LL------SHEYRKGKDGKHKKNGKNINMDVLQSKKGLLDMK------DLHEVCNGIGNK 240

Query: 241 CTETPRD---NGKTNQIHVIGDCRSSDAVNVETETDSHGSSRESLFRMLKWVRKTAKHPA 300
            T+   +   + K N+ +   D    D    +   DS    RESL  MLKWV + AK P 
Sbjct: 241 HTDDDDEKFRDYKENKSYDDDDVVILDPRIGKKIFDSRKRKRESLSTMLKWVIQIAKCPD 300

Query: 301 NPSNGTVPGSSKWKAYASEDALWLQVIKAKDALLNRKDVDKTAEKRLLIQKKVRMHPCIY 360
            P +  +P  SK+K Y   + LW Q ++A+DALL ++ VD  +E R L+Q   +MHP +Y
Sbjct: 301 GPLSEEIP--SKFKDYKGRE-LWAQAVRARDALLRKRLVDSNSE-RSLLQSNHKMHPSMY 360

Query: 361 EDNIDDNHHLSTERICCSRRSNALSKSESVACNNSCPPVQSNQIGSLTTEIGKGLKNQAL 420
           E+ +      S ER+ CS R + L K  S +C NSC   QS  IGS  T+    LK Q L
Sbjct: 361 EE-VTAATDQSAERLRCSERLHTLVKPRSCSCCNSC-AAQSQLIGSPKTQFEDCLKGQPL 420

Query: 421 LNGDLASEMEDNQANEDSVEKPVPVGASFQAVLPEWTGNISDSDSKWLGTRSWPSQHENN 480
           +N DL+        + D +++ VPVG  FQA +PEWTG +S+SD +WLGT+ WP   ++N
Sbjct: 421 VNDDLSDAKSTQSPSGDEIQRHVPVGPRFQADVPEWTGMVSESDPRWLGTQVWPFDGDHN 480

Query: 481 KSVSDRNPISRGRLDPCSCQFPGSVECYRFHIAEARMRLKLELGLTFYDWRFHQMGEEIS 540
             V + + I +GR D CSCQ PGSVEC RFHIAE+RM+LKLELG  FY WRF  MGEEIS
Sbjct: 481 APV-ETDSIGKGRRDVCSCQLPGSVECVRFHIAESRMKLKLELGHMFYQWRFDHMGEEIS 540

Query: 541 LQWTAEEENRFKELAISSFNNQNQCFWNHSLKWFPMKSRKNLISYYFNVFLLRQRSYQNR 600
           L+WTAEEE RFK +   +  + ++ FW+   K+FP K R+ L+SYYFNVF++++RSYQNR
Sbjct: 541 LRWTAEEEMRFKNMVRFNPPSLDKSFWDDYRKYFPRKKREELVSYYFNVFVVQRRSYQNR 600

Query: 601 VTPNDIDSDGEDVEFGCISGDFGAKAMEVLGSKFVECSENKQ 636
           VTP  IDSD ++ EFG +S ++G +A++V GS  + CSENKQ
Sbjct: 601 VTPKHIDSDDDESEFGSLSDNYGHRAVQVPGSNKLICSENKQ 616

The following BLAST results are available for this feature:
BLAST of CsaV3_4G005870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146560.20.0e+00100.00PREDICTED: AT-rich interactive domain-containing protein 2 [Cucumis sativus] >KG... [more]
XP_008452043.10.0e+0094.68PREDICTED: AT-rich interactive domain-containing protein 2 [Cucumis melo][more]
XP_022931397.11.6e-27575.94AT-rich interactive domain-containing protein 2-like isoform X3 [Cucurbita mosch... [more]
XP_022984736.16.2e-27575.94AT-rich interactive domain-containing protein 2-like isoform X1 [Cucurbita maxim... [more]
XP_022984737.12.3e-26974.84AT-rich interactive domain-containing protein 2-like isoform X2 [Cucurbita maxim... [more]
BLAST of CsaV3_4G005870 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G11400.11.8e-8735.32ARID/BRIGHT DNA-binding domain;ELM2 domain protein[more]
AT2G46040.18.9e-6633.10ARID/BRIGHT DNA-binding domain;ELM2 domain protein[more]
AT5G04110.16.6e-2938.89DNA GYRASE B3[more]
AT1G26580.16.7e-2134.60FUNCTIONS IN: molecular_function unknown[more]
AT1G13880.19.6e-2031.43ELM2 domain-containing protein[more]
BLAST of CsaV3_4G005870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LDD4|ARID2_ARATH3.3e-8635.32AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q84JT7|ARID1_ARATH1.6e-6433.10AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of CsaV3_4G005870 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KZM1|A0A0A0KZM1_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047920 PE=4 SV=1[more]
tr|A0A1S3BSW2|A0A1S3BSW2_CUCME0.0e+0094.68AT-rich interactive domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|M5W8M5|M5W8M5_PRUPE8.4e-12743.89Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G103500 PE=4 SV=1[more]
tr|A0A2P6P6S3|A0A2P6P6S3_ROSCH1.7e-12443.92Putative transcription factor & chromatin remodeling ARID family OS=Rosa chinens... [more]
tr|A0A2C9WIA7|A0A2C9WIA7_MANES1.1e-12342.99Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G060100 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR036431ARID_dom_sf
IPR001606ARID_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G005870.1CsaV3_4G005870.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01014ARID_2coord: 46..138
e-value: 4.2E-8
score: 42.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 460..480
NoneNo IPR availablePANTHERPTHR22970:SF23AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1coord: 52..624
NoneNo IPR availablePANTHERPTHR22970FAMILY NOT NAMEDcoord: 52..624
IPR001606ARID DNA-binding domainSMARTSM00501bright_3coord: 49..143
e-value: 4.7E-12
score: 56.0
IPR001606ARID DNA-binding domainPFAMPF01388ARIDcoord: 66..138
e-value: 2.9E-9
score: 37.4
IPR001606ARID DNA-binding domainPROSITEPS51011ARIDcoord: 49..142
score: 17.151
IPR036431ARID DNA-binding domain superfamilyGENE3DG3DSA:1.10.150.60coord: 43..152
e-value: 1.3E-10
score: 42.7
IPR036431ARID DNA-binding domain superfamilySUPERFAMILYSSF46774ARID-likecoord: 52..145

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G005870CSPI04G05710Wild cucumber (PI 183967)cpicucB213
CsaV3_4G005870CSPI03G08680Wild cucumber (PI 183967)cpicucB161
CsaV3_4G005870Cucsa.106730Cucumber (Gy14) v1cgycucB134
CsaV3_4G005870Cucsa.258480Cucumber (Gy14) v1cgycucB391
CsaV3_4G005870CmaCh16G006010Cucurbita maxima (Rimu)cmacucB0393
CsaV3_4G005870CmoCh16G006560Cucurbita moschata (Rifu)cmocucB0388
CsaV3_4G005870Cp4.1LG14g02060Cucurbita pepo (Zucchini)cpecucB0266
CsaV3_4G005870CsGy3G008760Cucumber (Gy14) v2cgybcucB129
CsaV3_4G005870CsGy4G005580Cucumber (Gy14) v2cgybcucB171
CsaV3_4G005870Carg05723Silver-seed gourdcarcucB1063
CsaV3_4G005870Cla014615Watermelon (97103) v1cucwmB322
CsaV3_4G005870Cla021227Watermelon (97103) v1cucwmB338
CsaV3_4G005870MELO3C006099Melon (DHL92) v3.5.1cucmeB297
CsaV3_4G005870MELO3C016362Melon (DHL92) v3.5.1cucmeB315
CsaV3_4G005870ClCG05G001430Watermelon (Charleston Gray)cucwcgB331
CsaV3_4G005870ClCG07G008230Watermelon (Charleston Gray)cucwcgB344
CsaV3_4G005870Lsi07G002740Bottle gourd (USVL1VR-Ls)cuclsiB322
CsaV3_4G005870MELO3C016363.2Melon (DHL92) v3.6.1cucmedB307
CsaV3_4G005870MELO3C006099.2Melon (DHL92) v3.6.1cucmedB289
CsaV3_4G005870Cla97C05G081790Watermelon (97103) v2cucwmbB319
CsaV3_4G005870Cla97C07G135340Watermelon (97103) v2cucwmbB330
CsaV3_4G005870Bhi01G001857Wax gourdcucwgoB372
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_4G005870CsaV3_3G008820Cucumber (Chinese Long) v3cuccucB117
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G005870Cucumber (Chinese Long) v3cuccucB175
CsaV3_4G005870Silver-seed gourdcarcucB0982
CsaV3_4G005870Cucumber (Gy14) v2cgybcucB230
CsaV3_4G005870Cucurbita maxima (Rimu)cmacucB0847
CsaV3_4G005870Cucurbita moschata (Rifu)cmocucB0833
CsaV3_4G005870Cucurbita pepo (Zucchini)cpecucB0497
CsaV3_4G005870Wild cucumber (PI 183967)cpicucB282
CsaV3_4G005870Bottle gourd (USVL1VR-Ls)cuclsiB268
CsaV3_4G005870Melon (DHL92) v3.5.1cucmeB268
CsaV3_4G005870Melon (DHL92) v3.6.1cucmedB263
CsaV3_4G005870Watermelon (Charleston Gray)cucwcgB301
CsaV3_4G005870Watermelon (97103) v1cucwmB345
CsaV3_4G005870Wax gourdcucwgoB381